EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000036522 (Gene tree)
Gene ID: 100983664
Gene Symbol: APOBEC3H
Alias: -
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 3H
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Plus strand
Length: 6839 bases
Position: chr22:37821315-37828153
Accession: 100983664
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000026882	APOBEC_N	PF08210.11	2.7e-36	1	1
ENSPPAP00000026886	APOBEC_N	PF08210.11	3.7e-36	1	1
ENSPPAP00000026890	APOBEC_N	PF08210.11	3.4e-28	1	1
ENSPPAP00000026882	APOBEC_C	PF05240.14	2.6e-25	1	1
ENSPPAP00000026886	APOBEC_C	PF05240.14	3.2e-25	1	1
ENSPPAP00000026890	APOBEC_C	PF05240.14	7.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000049722	APOBEC3H-202	603	XM_003821608	ENSPPAP00000026886	200 (aa)	XP_003821656	A0A2R9BF10
ENSPPAT00000049718	APOBEC3H-201	1050	XM_003821609	ENSPPAP00000026882	183 (aa)	XP_003821657	A0A2R9BCL9
ENSPPAT00000049726	APOBEC3H-203	465	XM_008975110	ENSPPAP00000026890	154 (aa)	XP_008973358	A0A2R9BJC1

Gene Model

Click here to download ENSPPAG00000036522's gene model file

Pathways

Pathway ID	Pathway Name	Source
pps05170	Human immunodeficiency virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000036522's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000036522	APOBEC3H	73	40.299	ENSPPAG00000014118	APOBEC3C	68	40.299
ENSPPAG00000036522	APOBEC3H	99	33.582	ENSPPAG00000028218	-	89	34.356
ENSPPAG00000036522	APOBEC3H	97	35.676	ENSPPAG00000038169	AICDA	90	35.106
ENSPPAG00000036522	APOBEC3H	98	37.430	ENSPPAG00000033277	-	63	41.304
ENSPPAG00000036522	APOBEC3H	100	34.184	ENSPPAG00000009288	APOBEC3B	90	34.184

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000036522	APOBEC3H	100	95.455	ENSG00000100298	APOBEC3H	100	95.455	Homo_sapiens
ENSPPAG00000036522	APOBEC3H	98	47.027	ENSAMEG00000010818	-	82	47.027	Ailuropoda_melanoleuca
ENSPPAG00000036522	APOBEC3H	99	72.973	ENSANAG00000025410	APOBEC3H	83	70.811	Aotus_nancymaae
ENSPPAG00000036522	APOBEC3H	98	48.333	ENSBTAG00000007755	APOBEC3H	92	48.333	Bos_taurus
ENSPPAG00000036522	APOBEC3H	100	72.078	ENSCJAG00000012524	APOBEC3H	100	70.130	Callithrix_jacchus
ENSPPAG00000036522	APOBEC3H	99	48.901	ENSCAFG00000001361	APOBEC3Z3	93	47.802	Canis_familiaris
ENSPPAG00000036522	APOBEC3H	99	48.352	ENSCAFG00020002584	-	96	46.597	Canis_lupus_dingo
ENSPPAG00000036522	APOBEC3H	98	48.889	ENSCHIG00000026580	-	95	48.889	Capra_hircus
ENSPPAG00000036522	APOBEC3H	97	51.124	ENSTSYG00000032894	-	100	51.124	Carlito_syrichta
ENSPPAG00000036522	APOBEC3H	100	52.486	ENSCPOG00000009257	-	86	52.809	Cavia_porcellus
ENSPPAG00000036522	APOBEC3H	100	76.433	ENSCCAG00000008525	APOBEC3H	100	75.796	Cebus_capucinus
ENSPPAG00000036522	APOBEC3H	100	81.818	ENSCATG00000030302	APOBEC3H	100	81.818	Cercocebus_atys
ENSPPAG00000036522	APOBEC3H	98	52.222	ENSCLAG00000016615	-	88	52.222	Chinchilla_lanigera
ENSPPAG00000036522	APOBEC3H	100	79.781	ENSCSAG00000006371	APOBEC3H	87	79.781	Chlorocebus_sabaeus
ENSPPAG00000036522	APOBEC3H	100	50.538	ENSCGRG00001022976	Apobec3	84	50.538	Cricetulus_griseus_chok1gshd
ENSPPAG00000036522	APOBEC3H	100	50.538	ENSCGRG00000005621	Apobec3	84	50.538	Cricetulus_griseus_crigri
ENSPPAG00000036522	APOBEC3H	98	51.892	ENSDORG00000027271	-	99	42.857	Dipodomys_ordii
ENSPPAG00000036522	APOBEC3H	97	52.809	ENSECAG00000007726	APOBEC3H	75	52.809	Equus_caballus
ENSPPAG00000036522	APOBEC3H	98	50.556	ENSFCAG00000005251	APOBEC3Z3	93	50.273	Felis_catus
ENSPPAG00000036522	APOBEC3H	98	51.667	ENSSTOG00000007125	-	85	51.667	Ictidomys_tridecemlineatus
ENSPPAG00000036522	APOBEC3H	99	50.000	ENSJJAG00000016840	-	73	50.000	Jaculus_jaculus
ENSPPAG00000036522	APOBEC3H	100	50.562	ENSLAFG00000027404	-	95	50.562	Loxodonta_africana
ENSPPAG00000036522	APOBEC3H	100	83.117	ENSMFAG00000031827	APOBEC3H	100	83.117	Macaca_fascicularis
ENSPPAG00000036522	APOBEC3H	100	83.766	ENSMMUG00000001016	APOBEC3H	100	83.766	Macaca_mulatta
ENSPPAG00000036522	APOBEC3H	100	83.117	ENSMNEG00000039259	APOBEC3H	100	83.117	Macaca_nemestrina
ENSPPAG00000036522	APOBEC3H	100	83.766	ENSMLEG00000033417	APOBEC3H	100	83.766	Mandrillus_leucophaeus
ENSPPAG00000036522	APOBEC3H	100	49.198	ENSMAUG00000011683	Apobec3	72	49.189	Mesocricetus_auratus
ENSPPAG00000036522	APOBEC3H	99	50.549	ENSMOCG00000021576	Apobec3	83	50.000	Microtus_ochrogaster
ENSPPAG00000036522	APOBEC3H	100	48.649	MGP_CAROLIEiJ_G0020029	Apobec3	92	48.108	Mus_caroli
ENSPPAG00000036522	APOBEC3H	100	43.784	ENSMUSG00000009585	Apobec3	97	45.361	Mus_musculus
ENSPPAG00000036522	APOBEC3H	100	48.404	MGP_PahariEiJ_G0020031	-	86	47.340	Mus_pahari
ENSPPAG00000036522	APOBEC3H	100	47.027	MGP_SPRETEiJ_G0020927	Apobec3	98	39.286	Mus_spretus
ENSPPAG00000036522	APOBEC3H	98	50.000	ENSMPUG00000013239	-	78	50.000	Mustela_putorius_furo
ENSPPAG00000036522	APOBEC3H	100	48.889	ENSNGAG00000018998	Apobec3	93	48.889	Nannospalax_galili
ENSPPAG00000036522	APOBEC3H	100	85.792	ENSNLEG00000015218	-	87	85.792	Nomascus_leucogenys
ENSPPAG00000036522	APOBEC3H	98	41.341	ENSOCUG00000023913	-	81	41.341	Oryctolagus_cuniculus
ENSPPAG00000036522	APOBEC3H	98	48.889	ENSOARG00000016290	APOBEC3F	96	48.889	Ovis_aries
ENSPPAG00000036522	APOBEC3H	98	51.381	ENSPPRG00000003941	-	93	50.543	Panthera_pardus
ENSPPAG00000036522	APOBEC3H	89	34.965	ENSPPRG00000003675	-	88	34.682	Panthera_pardus
ENSPPAG00000036522	APOBEC3H	98	51.381	ENSPTIG00000010283	-	93	50.543	Panthera_tigris_altaica
ENSPPAG00000036522	APOBEC3H	100	100.000	ENSPTRG00000014390	APOBEC3H	100	100.000	Pan_troglodytes
ENSPPAG00000036522	APOBEC3H	99	83.978	ENSPANG00000010774	APOBEC3H	99	83.660	Papio_anubis
ENSPPAG00000036522	APOBEC3H	100	46.774	ENSPEMG00000000456	Apobec3	76	46.774	Peromyscus_maniculatus_bairdii
ENSPPAG00000036522	APOBEC3H	100	86.885	ENSPPYG00000011834	-	87	86.885	Pongo_abelii
ENSPPAG00000036522	APOBEC3H	98	41.667	ENSPCAG00000015655	-	99	41.111	Procavia_capensis
ENSPPAG00000036522	APOBEC3H	69	35.433	ENSPVAG00000024161	-	93	35.433	Pteropus_vampyrus
ENSPPAG00000036522	APOBEC3H	97	50.562	ENSPVAG00000009462	-	98	50.562	Pteropus_vampyrus
ENSPPAG00000036522	APOBEC3H	69	37.008	ENSPVAG00000024267	-	93	37.008	Pteropus_vampyrus
ENSPPAG00000036522	APOBEC3H	100	48.128	ENSRNOG00000016852	Apobec3	84	48.128	Rattus_norvegicus
ENSPPAG00000036522	APOBEC3H	100	81.500	ENSRBIG00000029088	APOBEC3H	100	81.500	Rhinopithecus_bieti
ENSPPAG00000036522	APOBEC3H	100	82.000	ENSRROG00000024699	APOBEC3H	100	82.000	Rhinopithecus_roxellana
ENSPPAG00000036522	APOBEC3H	99	71.038	ENSSBOG00000030005	APOBEC3H	100	70.922	Saimiri_boliviensis_boliviensis
ENSPPAG00000036522	APOBEC3H	98	51.111	ENSSSCG00000000091	APOBEC3B	83	50.000	Sus_scrofa
ENSPPAG00000036522	APOBEC3H	94	50.000	ENSTBEG00000001532	-	98	50.000	Tupaia_belangeri
ENSPPAG00000036522	APOBEC3H	98	50.556	ENSTTRG00000001266	-	99	50.556	Tursiops_truncatus
ENSPPAG00000036522	APOBEC3H	98	48.936	ENSUAMG00000004427	-	83	48.936	Ursus_americanus
ENSPPAG00000036522	APOBEC3H	98	51.934	ENSUMAG00000014435	-	91	51.934	Ursus_maritimus
ENSPPAG00000036522	APOBEC3H	71	52.308	ENSVPAG00000011108	-	98	52.308	Vicugna_pacos