EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPPAG00000036640 (Gene tree)
Gene ID: 100984482
Gene Symbol: -
Alias: -
Full Name: survival motor neuron protein
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Plus strand
Length: 26570 bases
Position: chr5:45876144-45902713
Accession: 100984482
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000027176	SMN	PF06003.12	9.9e-104	1	1
ENSPPAP00000027182	SMN	PF06003.12	9.9e-100	1	1
ENSPPAP00000027185	SMN	PF06003.12	1.1e-99	1	1
ENSPPAP00000027186	SMN	PF06003.12	1.6e-99	1	1
ENSPPAP00000027183	SMN	PF06003.12	8.8e-91	1	2
ENSPPAP00000027183	SMN	PF06003.12	8.8e-91	2	2
ENSPPAP00000027184	SMN	PF06003.12	4.8e-56	1	2
ENSPPAP00000027184	SMN	PF06003.12	4.8e-56	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000050024	-	885	-	ENSPPAP00000027185	294 (aa)	-	A0A2R9BKE9
ENSPPAT00000050025	-	846	-	ENSPPAP00000027186	282 (aa)	-	A0A2R9BFW9
ENSPPAT00000050015	-	1057	XM_003806767	ENSPPAP00000027176	294 (aa)	XP_003806815	A0A2R9BFV3
ENSPPAT00000050021	-	849	-	ENSPPAP00000027182	282 (aa)	-	A0A2R9BDE8
ENSPPAT00000050022	-	789	-	ENSPPAP00000027183	262 (aa)	-	A0A2R9BC27
ENSPPAT00000050023	-	684	-	ENSPPAP00000027184	227 (aa)	-	A0A2R9BC61

Gene Model

Click here to download ENSPPAG00000036640's gene model file

Pathways

Pathway ID	Pathway Name	Source
pps03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000036640's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000036640	-	100	100.000	ENSG00000172062	SMN1	100	100.000	Homo_sapiens
ENSPPAG00000036640	-	100	100.000	ENSG00000205571	SMN2	100	100.000	Homo_sapiens
ENSPPAG00000036640	-	92	51.685	ENSAPOG00000011324	smn1	94	52.518	Acanthochromis_polyacanthus
ENSPPAG00000036640	-	95	88.256	ENSAMEG00000003316	-	93	88.256	Ailuropoda_melanoleuca
ENSPPAG00000036640	-	91	51.685	ENSACIG00000019772	-	97	50.000	Amphilophus_citrinellus
ENSPPAG00000036640	-	92	51.685	ENSAOCG00000024444	smn1	94	52.518	Amphiprion_ocellaris
ENSPPAG00000036640	-	92	52.060	ENSAPEG00000016504	smn1	94	52.878	Amphiprion_percula
ENSPPAG00000036640	-	92	53.506	ENSATEG00000002182	smn1	83	53.710	Anabas_testudineus
ENSPPAG00000036640	-	68	57.436	ENSAPLG00000010912	-	97	55.446	Anas_platyrhynchos
ENSPPAG00000036640	-	84	81.633	ENSACAG00000010017	-	95	57.295	Anolis_carolinensis
ENSPPAG00000036640	-	100	90.878	ENSANAG00000032133	-	100	90.878	Aotus_nancymaae
ENSPPAG00000036640	-	92	54.074	ENSACLG00000007308	smn1	88	52.896	Astatotilapia_calliptera
ENSPPAG00000036640	-	54	57.746	ENSAMXG00000013884	smn1	97	48.944	Astyanax_mexicanus
ENSPPAG00000036640	-	95	84.328	ENSBTAG00000005743	SMN2	97	83.986	Bos_taurus
ENSPPAG00000036640	-	85	33.188	WBGene00004887	smn-1	94	32.432	Caenorhabditis_elegans
ENSPPAG00000036640	-	100	95.604	ENSCJAG00000016290	-	100	95.604	Callithrix_jacchus
ENSPPAG00000036640	-	95	88.256	ENSCAFG00000007812	SMN	97	88.256	Canis_familiaris
ENSPPAG00000036640	-	95	88.256	ENSCAFG00020019229	-	90	88.256	Canis_lupus_dingo
ENSPPAG00000036640	-	95	85.130	ENSCHIG00000015559	-	95	84.752	Capra_hircus
ENSPPAG00000036640	-	99	88.889	ENSTSYG00000012058	-	96	92.500	Carlito_syrichta
ENSPPAG00000036640	-	79	66.228	ENSCAPG00000011021	-	100	66.667	Cavia_aperea
ENSPPAG00000036640	-	99	83.908	ENSCPOG00000036973	-	99	80.546	Cavia_porcellus
ENSPPAG00000036640	-	100	81.522	ENSCPOG00000012328	-	96	80.488	Cavia_porcellus
ENSPPAG00000036640	-	100	94.505	ENSCCAG00000018127	-	100	94.275	Cebus_capucinus
ENSPPAG00000036640	-	100	96.916	ENSCATG00000037002	-	100	96.916	Cercocebus_atys
ENSPPAG00000036640	-	99	80.000	ENSCLAG00000000284	-	99	80.000	Chinchilla_lanigera
ENSPPAG00000036640	-	100	96.703	ENSCSAG00000015688	-	100	96.599	Chlorocebus_sabaeus
ENSPPAG00000036640	-	81	82.812	ENSCHOG00000007346	-	100	74.206	Choloepus_hoffmanni
ENSPPAG00000036640	-	99	61.566	ENSCPBG00000010968	-	99	61.852	Chrysemys_picta_bellii
ENSPPAG00000036640	-	100	96.703	ENSCANG00000038242	-	100	96.703	Colobus_angolensis_palliatus
ENSPPAG00000036640	-	99	91.039	ENSCANG00000033324	-	100	85.115	Colobus_angolensis_palliatus
ENSPPAG00000036640	-	99	63.699	ENSCGRG00001016998	-	96	64.057	Cricetulus_griseus_chok1gshd
ENSPPAG00000036640	-	95	88.000	ENSCGRG00001017959	-	97	83.630	Cricetulus_griseus_chok1gshd
ENSPPAG00000036640	-	95	88.000	ENSCGRG00000007698	Smn1	97	83.630	Cricetulus_griseus_crigri
ENSPPAG00000036640	-	94	48.399	ENSCSEG00000015227	smn1	97	48.789	Cynoglossus_semilaevis
ENSPPAG00000036640	-	94	52.045	ENSCVAG00000007498	smn1	94	52.015	Cyprinodon_variegatus
ENSPPAG00000036640	-	93	52.574	ENSDARG00000018494	smn1	96	53.285	Danio_rerio
ENSPPAG00000036640	-	77	72.637	ENSDNOG00000045949	-	86	72.059	Dasypus_novemcinctus
ENSPPAG00000036640	-	82	83.817	ENSDNOG00000007283	-	99	83.817	Dasypus_novemcinctus
ENSPPAG00000036640	-	99	83.688	ENSDORG00000007082	Smn1	99	78.007	Dipodomys_ordii
ENSPPAG00000036640	-	80	69.524	ENSETEG00000001406	-	89	69.565	Echinops_telfairi
ENSPPAG00000036640	-	94	40.070	ENSEBUG00000011902	smn1	92	39.630	Eptatretus_burgeri
ENSPPAG00000036640	-	99	76.512	ENSEASG00005018000	-	89	82.540	Equus_asinus_asinus
ENSPPAG00000036640	-	90	93.651	ENSECAG00000015215	-	96	87.143	Equus_caballus
ENSPPAG00000036640	-	89	81.349	ENSEEUG00000015777	-	100	81.349	Erinaceus_europaeus
ENSPPAG00000036640	-	78	73.077	ENSELUG00000018067	smn1	94	52.878	Esox_lucius
ENSPPAG00000036640	-	99	88.444	ENSFCAG00000028292	SMN	97	89.680	Felis_catus
ENSPPAG00000036640	-	89	60.784	ENSFALG00000012320	-	94	58.088	Ficedula_albicollis
ENSPPAG00000036640	-	99	78.451	ENSFDAG00000017683	-	99	79.461	Fukomys_damarensis
ENSPPAG00000036640	-	68	56.180	ENSFHEG00000018508	smn1	96	48.889	Fundulus_heteroclitus
ENSPPAG00000036640	-	96	48.708	ENSGMOG00000017279	smn1	93	48.897	Gadus_morhua
ENSPPAG00000036640	-	93	59.245	ENSGALG00000002430	SMN	95	57.353	Gallus_gallus
ENSPPAG00000036640	-	90	54.959	ENSGAFG00000009501	smn1	93	55.187	Gambusia_affinis
ENSPPAG00000036640	-	92	54.406	ENSGACG00000010584	smn1	91	51.481	Gasterosteus_aculeatus
ENSPPAG00000036640	-	96	62.545	ENSGAGG00000011374	-	97	61.210	Gopherus_agassizii
ENSPPAG00000036640	-	93	36.434	ENSGAGG00000013639	-	89	38.503	Gopherus_agassizii
ENSPPAG00000036640	-	97	96.875	ENSGGOG00000003872	-	100	99.593	Gorilla_gorilla
ENSPPAG00000036640	-	100	85.496	ENSGGOG00000026704	-	99	99.048	Gorilla_gorilla
ENSPPAG00000036640	-	92	54.615	ENSHBUG00000013987	smn1	94	52.809	Haplochromis_burtoni
ENSPPAG00000036640	-	99	79.125	ENSHGLG00000001018	-	96	80.420	Heterocephalus_glaber_female
ENSPPAG00000036640	-	99	78.082	ENSHGLG00000001905	-	99	78.082	Heterocephalus_glaber_female
ENSPPAG00000036640	-	99	77.419	ENSHGLG00100018676	-	100	77.660	Heterocephalus_glaber_male
ENSPPAG00000036640	-	99	79.125	ENSHGLG00100011252	-	96	80.420	Heterocephalus_glaber_male
ENSPPAG00000036640	-	86	80.851	ENSHCOG00000017136	smn1	87	49.621	Hippocampus_comes
ENSPPAG00000036640	-	91	51.119	ENSIPUG00000012580	smn1	85	48.754	Ictalurus_punctatus
ENSPPAG00000036640	-	99	86.380	ENSSTOG00000012288	-	100	86.380	Ictidomys_tridecemlineatus
ENSPPAG00000036640	-	66	61.494	ENSJJAG00000014853	-	89	65.143	Jaculus_jaculus
ENSPPAG00000036640	-	92	54.380	ENSKMAG00000007239	smn1	96	52.672	Kryptolebias_marmoratus
ENSPPAG00000036640	-	92	52.174	ENSLBEG00000022550	smn1	94	54.044	Labrus_bergylta
ENSPPAG00000036640	-	93	37.410	ENSLACG00000009808	-	90	37.943	Latimeria_chalumnae
ENSPPAG00000036640	-	93	50.000	ENSLOCG00000011339	smn1	93	55.328	Lepisosteus_oculatus
ENSPPAG00000036640	-	99	85.714	ENSLAFG00000003425	-	100	80.986	Loxodonta_africana
ENSPPAG00000036640	-	100	97.802	ENSMFAG00000031523	SMN1	100	97.802	Macaca_fascicularis
ENSPPAG00000036640	-	100	93.407	ENSMFAG00000008812	-	100	92.517	Macaca_fascicularis
ENSPPAG00000036640	-	100	91.837	ENSMMUG00000030594	-	100	91.837	Macaca_mulatta
ENSPPAG00000036640	-	100	97.802	ENSMMUG00000020214	SMN1	100	97.802	Macaca_mulatta
ENSPPAG00000036640	-	100	97.802	ENSMNEG00000035094	-	100	97.802	Macaca_nemestrina
ENSPPAG00000036640	-	76	83.408	ENSMNEG00000036423	-	87	83.408	Macaca_nemestrina
ENSPPAG00000036640	-	100	96.947	ENSMLEG00000041902	-	100	96.947	Mandrillus_leucophaeus
ENSPPAG00000036640	-	92	51.880	ENSMAMG00000011034	smn1	94	51.087	Mastacembelus_armatus
ENSPPAG00000036640	-	92	51.923	ENSMZEG00005013634	smn1	94	52.809	Maylandia_zebra
ENSPPAG00000036640	-	68	55.440	ENSMGAG00000008889	-	95	53.266	Meleagris_gallopavo
ENSPPAG00000036640	-	99	81.004	ENSMAUG00000010262	Smn1	96	82.796	Mesocricetus_auratus
ENSPPAG00000036640	-	99	89.011	ENSMICG00000034708	-	99	89.011	Microcebus_murinus
ENSPPAG00000036640	-	99	80.935	ENSMOCG00000017833	Smn1	97	81.495	Microtus_ochrogaster
ENSPPAG00000036640	-	93	51.145	ENSMMOG00000005504	smn1	94	53.612	Mola_mola
ENSPPAG00000036640	-	87	83.333	ENSMODG00000001436	-	95	69.014	Monodelphis_domestica
ENSPPAG00000036640	-	93	48.905	ENSMALG00000008025	smn1	94	51.439	Monopterus_albus
ENSPPAG00000036640	-	99	82.734	MGP_CAROLIEiJ_G0018836	Smn1	96	83.513	Mus_caroli
ENSPPAG00000036640	-	99	82.374	ENSMUSG00000021645	Smn1	96	83.513	Mus_musculus
ENSPPAG00000036640	-	99	80.220	MGP_PahariEiJ_G0015911	Smn1	96	79.928	Mus_pahari
ENSPPAG00000036640	-	99	82.014	MGP_SPRETEiJ_G0019718	Smn1	96	82.796	Mus_spretus
ENSPPAG00000036640	-	99	88.214	ENSMPUG00000014470	-	95	89.219	Mustela_putorius_furo
ENSPPAG00000036640	-	95	87.108	ENSMLUG00000010603	-	92	87.108	Myotis_lucifugus
ENSPPAG00000036640	-	99	83.154	ENSNGAG00000019833	Smn1	97	83.986	Nannospalax_galili
ENSPPAG00000036640	-	92	53.846	ENSNBRG00000023000	smn1	94	53.069	Neolamprologus_brichardi
ENSPPAG00000036640	-	100	99.559	ENSNLEG00000004454	-	100	99.559	Nomascus_leucogenys
ENSPPAG00000036640	-	80	61.404	ENSMEUG00000011393	-	99	62.882	Notamacropus_eugenii
ENSPPAG00000036640	-	89	81.423	ENSOPRG00000002015	-	100	82.213	Ochotona_princeps
ENSPPAG00000036640	-	99	79.577	ENSODEG00000015976	-	97	79.577	Octodon_degus
ENSPPAG00000036640	-	93	53.091	ENSONIG00000011799	smn1	95	52.330	Oreochromis_niloticus
ENSPPAG00000036640	-	78	90.698	ENSOANG00000001626	-	95	63.736	Ornithorhynchus_anatinus
ENSPPAG00000036640	-	99	78.305	ENSOCUG00000025183	-	96	78.521	Oryctolagus_cuniculus
ENSPPAG00000036640	-	94	88.406	ENSOCUG00000026649	-	97	81.315	Oryctolagus_cuniculus
ENSPPAG00000036640	-	99	82.534	ENSOCUG00000017097	-	99	82.534	Oryctolagus_cuniculus
ENSPPAG00000036640	-	92	52.471	ENSORLG00000010552	smn1	94	52.399	Oryzias_latipes
ENSPPAG00000036640	-	92	51.923	ENSORLG00020007936	smn1	93	54.472	Oryzias_latipes_hni
ENSPPAG00000036640	-	92	50.000	ENSORLG00015022425	smn1	94	52.030	Oryzias_latipes_hsok
ENSPPAG00000036640	-	92	52.399	ENSOMEG00000007824	smn1	94	52.708	Oryzias_melastigma
ENSPPAG00000036640	-	95	80.443	ENSOGAG00000031414	-	94	80.443	Otolemur_garnettii
ENSPPAG00000036640	-	93	82.482	ENSOARG00000005425	-	99	82.482	Ovis_aries
ENSPPAG00000036640	-	99	88.889	ENSPPRG00000005575	-	97	90.036	Panthera_pardus
ENSPPAG00000036640	-	99	89.333	ENSPTIG00000007745	-	97	90.391	Panthera_tigris_altaica
ENSPPAG00000036640	-	100	100.000	ENSPTRG00000016955	-	100	99.618	Pan_troglodytes
ENSPPAG00000036640	-	100	92.308	ENSPANG00000000253	-	98	91.667	Papio_anubis
ENSPPAG00000036640	-	100	97.357	ENSPANG00000013601	-	100	97.357	Papio_anubis
ENSPPAG00000036640	-	76	91.892	ENSPKIG00000011096	smn1	93	54.357	Paramormyrops_kingsleyae
ENSPPAG00000036640	-	92	59.630	ENSPSIG00000014787	-	90	57.042	Pelodiscus_sinensis
ENSPPAG00000036640	-	93	47.985	ENSPMGG00000012285	smn1	95	50.187	Periophthalmus_magnuspinnatus
ENSPPAG00000036640	-	90	41.045	ENSPMAG00000005004	smn1	91	41.219	Petromyzon_marinus
ENSPPAG00000036640	-	85	84.746	ENSPCIG00000025764	-	97	68.905	Phascolarctos_cinereus
ENSPPAG00000036640	-	92	52.852	ENSPFOG00000007786	smn1	94	51.661	Poecilia_formosa
ENSPPAG00000036640	-	92	53.232	ENSPLAG00000012071	smn1	93	56.017	Poecilia_latipinna
ENSPPAG00000036640	-	92	52.852	ENSPMEG00000017085	smn1	93	55.602	Poecilia_mexicana
ENSPPAG00000036640	-	90	56.612	ENSPREG00000005824	smn1	93	56.846	Poecilia_reticulata
ENSPPAG00000036640	-	83	63.303	ENSPPYG00000019189	-	99	60.360	Pongo_abelii
ENSPPAG00000036640	-	91	98.513	ENSPPYG00000015533	-	97	98.513	Pongo_abelii
ENSPPAG00000036640	-	90	81.111	ENSPCAG00000004187	-	99	80.741	Procavia_capensis
ENSPPAG00000036640	-	85	91.525	ENSPCOG00000022307	-	99	75.877	Propithecus_coquereli
ENSPPAG00000036640	-	99	89.041	ENSPVAG00000005977	-	99	89.041	Pteropus_vampyrus
ENSPPAG00000036640	-	92	53.846	ENSPNYG00000014148	smn1	94	53.069	Pundamilia_nyererei
ENSPPAG00000036640	-	93	51.331	ENSPNAG00000014007	smn1	82	49.821	Pygocentrus_nattereri
ENSPPAG00000036640	-	99	81.319	ENSRNOG00000018067	Smn1	96	80.714	Rattus_norvegicus
ENSPPAG00000036640	-	100	97.357	ENSRBIG00000037052	-	100	97.357	Rhinopithecus_bieti
ENSPPAG00000036640	-	93	90.110	ENSRBIG00000036775	-	95	82.143	Rhinopithecus_bieti
ENSPPAG00000036640	-	100	97.357	ENSRROG00000039399	-	100	97.357	Rhinopithecus_roxellana
ENSPPAG00000036640	-	100	82.117	ENSRROG00000031088	-	100	79.322	Rhinopithecus_roxellana
ENSPPAG00000036640	-	86	85.600	ENSSBOG00000020112	-	87	86.000	Saimiri_boliviensis_boliviensis
ENSPPAG00000036640	-	100	94.505	ENSSBOG00000011665	-	100	94.505	Saimiri_boliviensis_boliviensis
ENSPPAG00000036640	-	99	66.894	ENSSHAG00000001499	-	96	69.145	Sarcophilus_harrisii
ENSPPAG00000036640	-	90	53.629	ENSSFOG00015015507	smn1	94	53.629	Scleropages_formosus
ENSPPAG00000036640	-	93	49.813	ENSSMAG00000007922	smn1	94	50.000	Scophthalmus_maximus
ENSPPAG00000036640	-	92	51.825	ENSSDUG00000018533	smn1	94	52.330	Seriola_dumerili
ENSPPAG00000036640	-	92	52.190	ENSSLDG00000021135	smn1	94	52.688	Seriola_lalandi_dorsalis
ENSPPAG00000036640	-	89	68.919	ENSSPUG00000000373	-	93	62.963	Sphenodon_punctatus
ENSPPAG00000036640	-	92	52.030	ENSSPAG00000004345	smn1	94	53.360	Stegastes_partitus
ENSPPAG00000036640	-	97	66.142	ENSSSCG00000029127	-	96	66.532	Sus_scrofa
ENSPPAG00000036640	-	72	57.277	ENSSSCG00000033865	-	94	60.563	Sus_scrofa
ENSPPAG00000036640	-	99	89.041	ENSSSCG00000016970	-	99	89.041	Sus_scrofa
ENSPPAG00000036640	-	98	58.865	ENSTGUG00000001548	-	96	60.674	Taeniopygia_guttata
ENSPPAG00000036640	-	91	48.507	ENSTRUG00000000736	smn	95	49.254	Takifugu_rubripes
ENSPPAG00000036640	-	93	50.189	ENSTNIG00000009892	smn1	95	49.451	Tetraodon_nigroviridis
ENSPPAG00000036640	-	70	86.413	ENSTBEG00000002399	-	89	86.413	Tupaia_belangeri
ENSPPAG00000036640	-	94	85.000	ENSTTRG00000005080	-	95	84.342	Tursiops_truncatus
ENSPPAG00000036640	-	70	87.500	ENSUAMG00000024947	-	67	87.500	Ursus_americanus
ENSPPAG00000036640	-	95	88.968	ENSUMAG00000007842	-	72	88.968	Ursus_maritimus
ENSPPAG00000036640	-	85	92.188	ENSVPAG00000009887	-	96	75.281	Vicugna_pacos
ENSPPAG00000036640	-	95	88.256	ENSVVUG00000006934	-	97	88.256	Vulpes_vulpes
ENSPPAG00000036640	-	90	65.432	ENSXETG00000018189	smn2	95	52.759	Xenopus_tropicalis
ENSPPAG00000036640	-	90	36.496	ENSXETG00000004912	-	78	59.016	Xenopus_tropicalis
ENSPPAG00000036640	-	91	55.328	ENSXMAG00000001521	smn1	94	55.556	Xiphophorus_maculatus