EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000037000 (Gene tree)
Gene ID: 100970032
Gene Symbol: -
Alias: -
Full Name: cleavage and polyadenylation specific factor 4 like
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 13263 bases
Position: chr17:72632583-72645845
Accession: 100970032
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000027864	zf-CCCH	PF00642.24	9e-19	1	1
ENSPPAP00000027868	zf-CCCH	PF00642.24	5.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000050707	-	444	XM_003810530	ENSPPAP00000027864	147 (aa)	XP_003810578	A0A2R9BE04
ENSPPAT00000050711	-	459	-	ENSPPAP00000027868	152 (aa)	-	A0A2R9BF97

Gene Model

Click here to download ENSPPAG00000037000's gene model file

Pathways

Pathway ID	Pathway Name	Source
pps03015	mRNA surveillance pathway	KEGG
pps05164	Influenza A	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000037000's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000037000	-	90	72.727	ENSPPAG00000043355	CPSF4	52	68.794

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000037000	-	100	100.000	ENSG00000187959	CPSF4L	100	99.342	Homo_sapiens
ENSPPAG00000037000	-	99	80.822	ENSAMEG00000002707	CPSF4L	53	80.822	Ailuropoda_melanoleuca
ENSPPAG00000037000	-	99	60.265	ENSANAG00000026558	-	100	60.265	Aotus_nancymaae
ENSPPAG00000037000	-	100	74.324	ENSCJAG00000019911	CPSF4L	94	72.059	Callithrix_jacchus
ENSPPAG00000037000	-	52	77.215	ENSCCAG00000030566	CPSF4L	66	77.215	Cebus_capucinus
ENSPPAG00000037000	-	100	95.918	ENSCATG00000044555	CPSF4L	100	83.553	Cercocebus_atys
ENSPPAG00000037000	-	100	94.595	ENSCSAG00000004429	CPSF4L	82	94.595	Chlorocebus_sabaeus
ENSPPAG00000037000	-	100	95.918	ENSCANG00000035042	CPSF4L	82	95.918	Colobus_angolensis_palliatus
ENSPPAG00000037000	-	99	73.288	ENSCGRG00001020079	Cpsf4l	81	73.288	Cricetulus_griseus_chok1gshd
ENSPPAG00000037000	-	99	73.288	ENSCGRG00000010419	Cpsf4l	81	73.288	Cricetulus_griseus_crigri
ENSPPAG00000037000	-	91	88.148	ENSDNOG00000014458	CPSF4L	89	84.685	Dasypus_novemcinctus
ENSPPAG00000037000	-	91	88.806	ENSEASG00005018763	CPSF4L	81	88.806	Equus_asinus_asinus
ENSPPAG00000037000	-	91	88.806	ENSECAG00000024813	CPSF4L	81	88.806	Equus_caballus
ENSPPAG00000037000	-	91	86.567	ENSFCAG00000004745	CPSF4L	53	86.567	Felis_catus
ENSPPAG00000037000	-	100	99.342	ENSGGOG00000026659	CPSF4L	100	99.342	Gorilla_gorilla
ENSPPAG00000037000	-	91	87.313	ENSSTOG00000001849	CPSF4L	77	87.313	Ictidomys_tridecemlineatus
ENSPPAG00000037000	-	99	77.397	ENSLAFG00000010697	CPSF4L	82	77.397	Loxodonta_africana
ENSPPAG00000037000	-	100	95.918	ENSMFAG00000037840	CPSF4L	100	88.158	Macaca_fascicularis
ENSPPAG00000037000	-	100	95.918	ENSMMUG00000001271	CPSF4L	100	88.158	Macaca_mulatta
ENSPPAG00000037000	-	100	95.918	ENSMNEG00000045419	CPSF4L	100	88.158	Macaca_nemestrina
ENSPPAG00000037000	-	100	96.599	ENSMLEG00000038527	CPSF4L	100	87.500	Mandrillus_leucophaeus
ENSPPAG00000037000	-	91	79.851	ENSMAUG00000019519	-	81	79.851	Mesocricetus_auratus
ENSPPAG00000037000	-	97	90.210	ENSMICG00000007503	CPSF4L	79	90.210	Microcebus_murinus
ENSPPAG00000037000	-	70	79.612	ENSMOCG00000015313	-	71	79.612	Microtus_ochrogaster
ENSPPAG00000037000	-	91	79.104	ENSMODG00000025672	CPSF4L	83	79.104	Monodelphis_domestica
ENSPPAG00000037000	-	91	72.593	MGP_CAROLIEiJ_G0017369	-	75	71.053	Mus_caroli
ENSPPAG00000037000	-	91	73.333	ENSMUSG00000018727	Cpsf4l	75	71.930	Mus_musculus
ENSPPAG00000037000	-	96	59.589	MGP_PahariEiJ_G0018499	-	92	59.589	Mus_pahari
ENSPPAG00000037000	-	84	67.200	MGP_SPRETEiJ_G0018215	-	82	67.200	Mus_spretus
ENSPPAG00000037000	-	91	84.444	ENSMPUG00000014276	CPSF4L	81	84.444	Mustela_putorius_furo
ENSPPAG00000037000	-	100	76.190	ENSMLUG00000009617	CPSF4L	82	76.190	Myotis_lucifugus
ENSPPAG00000037000	-	90	81.061	ENSNGAG00000009325	-	77	81.061	Nannospalax_galili
ENSPPAG00000037000	-	100	99.320	ENSNLEG00000001420	CPSF4L	100	96.711	Nomascus_leucogenys
ENSPPAG00000037000	-	69	76.471	ENSMEUG00000004051	-	100	76.471	Notamacropus_eugenii
ENSPPAG00000037000	-	96	68.493	ENSOPRG00000007484	-	99	68.493	Ochotona_princeps
ENSPPAG00000037000	-	91	79.851	ENSOCUG00000026495	CPSF4L	60	79.851	Oryctolagus_cuniculus
ENSPPAG00000037000	-	97	71.429	ENSPPRG00000001058	CPSF4L	100	71.429	Panthera_pardus
ENSPPAG00000037000	-	97	71.429	ENSPTIG00000012676	CPSF4L	100	71.429	Panthera_tigris_altaica
ENSPPAG00000037000	-	100	100.000	ENSPTRG00000009598	CPSF4L	100	99.342	Pan_troglodytes
ENSPPAG00000037000	-	100	96.599	ENSPANG00000020331	CPSF4L	100	95.395	Papio_anubis
ENSPPAG00000037000	-	91	77.612	ENSPEMG00000011680	Cpsf4l	80	71.545	Peromyscus_maniculatus_bairdii
ENSPPAG00000037000	-	93	78.676	ENSPCIG00000001889	CPSF4L	80	78.676	Phascolarctos_cinereus
ENSPPAG00000037000	-	100	98.684	ENSPPYG00000008589	-	100	98.684	Pongo_abelii
ENSPPAG00000037000	-	100	83.333	ENSPCOG00000021801	CPSF4L	100	82.781	Propithecus_coquereli
ENSPPAG00000037000	-	97	76.351	ENSPVAG00000006736	CPSF4L	99	76.351	Pteropus_vampyrus
ENSPPAG00000037000	-	100	95.918	ENSRBIG00000029048	CPSF4L	82	95.918	Rhinopithecus_bieti
ENSPPAG00000037000	-	100	95.238	ENSRROG00000037051	CPSF4L	82	95.238	Rhinopithecus_roxellana
ENSPPAG00000037000	-	56	85.542	ENSTBEG00000012716	-	92	85.542	Tupaia_belangeri
ENSPPAG00000037000	-	99	78.808	ENSTTRG00000005243	CPSF4L	100	78.808	Tursiops_truncatus
ENSPPAG00000037000	-	70	90.291	ENSUAMG00000007728	CPSF4L	66	90.291	Ursus_americanus
ENSPPAG00000037000	-	70	90.291	ENSUMAG00000007869	CPSF4L	66	90.291	Ursus_maritimus