EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPAG00000037315 (Gene tree)
Gene ID: 100985312
Gene Symbol: RBM42
Alias: -
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Plus strand
Length: 9000 bases
Position: chr19:41294818-41303817
Accession: 100985312
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000028705	RRM_1	PF00076.22	7.9e-18	1	1
ENSPPAP00000028697	RRM_1	PF00076.22	8.4e-18	1	1
ENSPPAP00000028662	RRM_1	PF00076.22	9.1e-18	1	1
ENSPPAP00000028695	RRM_1	PF00076.22	9.3e-18	1	1
ENSPPAP00000028642	RRM_1	PF00076.22	1e-17	1	1
ENSPPAP00000028596	RRM_1	PF00076.22	1e-17	1	1
ENSPPAP00000028728	RRM_1	PF00076.22	8.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000051510	RBM42-203	1613	XM_003816107	ENSPPAP00000028662	448 (aa)	XP_003816155	A0A2R9BJZ8
ENSPPAT00000051558	RBM42-207	1152	-	ENSPPAP00000028710	383 (aa)	-	A0A2R9BGF5
ENSPPAT00000051543	RBM42-204	1368	-	ENSPPAP00000028695	455 (aa)	-	A0A2R9BGD5
ENSPPAT00000051553	RBM42-206	1218	-	ENSPPAP00000028705	405 (aa)	-	A0A2R9BGE9
ENSPPAT00000051545	RBM42-205	1272	-	ENSPPAP00000028697	423 (aa)	-	A0A2R9BK32
ENSPPAT00000051490	RBM42-202	1703	XM_003816106	ENSPPAP00000028642	477 (aa)	XP_003816154	A0A2R9BJY1
ENSPPAT00000051576	RBM42-208	546	-	ENSPPAP00000028728	181 (aa)	-	A0A2R9BHE5
ENSPPAT00000051445	RBM42-201	1440	-	ENSPPAP00000028596	479 (aa)	-	A0A2R9BPM7

Gene Model

Click here to download ENSPPAG00000037315's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000037315's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000037315	RBM42	100	100.000	ENSG00000126254	RBM42	100	100.000	Homo_sapiens
ENSPPAG00000037315	RBM42	100	97.912	ENSAMEG00000000524	RBM42	100	97.912	Ailuropoda_melanoleuca
ENSPPAG00000037315	RBM42	85	95.775	ENSACAG00000005495	RBM42	72	93.333	Anolis_carolinensis
ENSPPAG00000037315	RBM42	100	100.000	ENSANAG00000027537	RBM42	100	100.000	Aotus_nancymaae
ENSPPAG00000037315	RBM42	100	100.000	ENSBTAG00000013440	RBM42	100	98.532	Bos_taurus
ENSPPAG00000037315	RBM42	100	100.000	ENSCJAG00000010220	RBM42	100	100.000	Callithrix_jacchus
ENSPPAG00000037315	RBM42	100	100.000	ENSCAFG00020018628	RBM42	96	100.000	Canis_lupus_dingo
ENSPPAG00000037315	RBM42	100	100.000	ENSCHIG00000009518	RBM42	100	98.661	Capra_hircus
ENSPPAG00000037315	RBM42	100	100.000	ENSTSYG00000014688	RBM42	100	100.000	Carlito_syrichta
ENSPPAG00000037315	RBM42	81	98.446	ENSCAPG00000009566	RBM42	99	98.446	Cavia_aperea
ENSPPAG00000037315	RBM42	100	100.000	ENSCPOG00000012365	RBM42	99	98.438	Cavia_porcellus
ENSPPAG00000037315	RBM42	100	100.000	ENSCCAG00000034440	RBM42	100	100.000	Cebus_capucinus
ENSPPAG00000037315	RBM42	100	100.000	ENSCATG00000041924	RBM42	100	100.000	Cercocebus_atys
ENSPPAG00000037315	RBM42	100	100.000	ENSCLAG00000012865	RBM42	99	97.768	Chinchilla_lanigera
ENSPPAG00000037315	RBM42	100	100.000	ENSCSAG00000004422	RBM42	100	98.891	Chlorocebus_sabaeus
ENSPPAG00000037315	RBM42	100	88.889	ENSCANG00000030272	RBM42	100	88.889	Colobus_angolensis_palliatus
ENSPPAG00000037315	RBM42	100	100.000	ENSCGRG00001018540	Rbm42	99	97.071	Cricetulus_griseus_chok1gshd
ENSPPAG00000037315	RBM42	100	100.000	ENSDNOG00000037397	RBM42	100	97.292	Dasypus_novemcinctus
ENSPPAG00000037315	RBM42	100	97.098	ENSDORG00000013001	Rbm42	99	97.098	Dipodomys_ordii
ENSPPAG00000037315	RBM42	93	91.304	ENSETEG00000007878	RBM42	74	91.304	Echinops_telfairi
ENSPPAG00000037315	RBM42	100	100.000	ENSEASG00005001074	RBM42	100	98.438	Equus_asinus_asinus
ENSPPAG00000037315	RBM42	100	100.000	ENSECAG00000018215	RBM42	100	98.438	Equus_caballus
ENSPPAG00000037315	RBM42	100	100.000	ENSFCAG00000006376	RBM42	100	100.000	Felis_catus
ENSPPAG00000037315	RBM42	100	100.000	ENSFDAG00000007440	RBM42	99	96.889	Fukomys_damarensis
ENSPPAG00000037315	RBM42	73	97.183	ENSGAGG00000014805	RBM42	50	92.086	Gopherus_agassizii
ENSPPAG00000037315	RBM42	100	100.000	ENSGGOG00000009972	RBM42	100	100.000	Gorilla_gorilla
ENSPPAG00000037315	RBM42	100	95.982	ENSHGLG00000008418	RBM42	99	95.982	Heterocephalus_glaber_female
ENSPPAG00000037315	RBM42	100	95.982	ENSHGLG00100018667	RBM42	99	95.982	Heterocephalus_glaber_male
ENSPPAG00000037315	RBM42	100	100.000	ENSSTOG00000013050	RBM42	99	98.661	Ictidomys_tridecemlineatus
ENSPPAG00000037315	RBM42	100	100.000	ENSJJAG00000010421	Rbm42	99	96.875	Jaculus_jaculus
ENSPPAG00000037315	RBM42	98	93.590	ENSLAFG00000014993	RBM42	99	92.276	Loxodonta_africana
ENSPPAG00000037315	RBM42	100	100.000	ENSMFAG00000002758	RBM42	100	100.000	Macaca_fascicularis
ENSPPAG00000037315	RBM42	100	100.000	ENSMMUG00000018954	RBM42	100	100.000	Macaca_mulatta
ENSPPAG00000037315	RBM42	100	100.000	ENSMNEG00000030009	RBM42	100	100.000	Macaca_nemestrina
ENSPPAG00000037315	RBM42	100	100.000	ENSMLEG00000036119	RBM42	100	100.000	Mandrillus_leucophaeus
ENSPPAG00000037315	RBM42	100	100.000	ENSMICG00000009880	RBM42	100	100.000	Microcebus_murinus
ENSPPAG00000037315	RBM42	100	100.000	ENSMOCG00000000405	Rbm42	99	96.855	Microtus_ochrogaster
ENSPPAG00000037315	RBM42	83	100.000	ENSMODG00000013957	RBM42	83	81.649	Monodelphis_domestica
ENSPPAG00000037315	RBM42	100	100.000	MGP_CAROLIEiJ_G0029536	Rbm42	99	97.484	Mus_caroli
ENSPPAG00000037315	RBM42	100	100.000	ENSMUSG00000036733	Rbm42	99	97.484	Mus_musculus
ENSPPAG00000037315	RBM42	100	100.000	MGP_PahariEiJ_G0012770	Rbm42	99	97.484	Mus_pahari
ENSPPAG00000037315	RBM42	100	100.000	MGP_SPRETEiJ_G0030632	Rbm42	99	97.484	Mus_spretus
ENSPPAG00000037315	RBM42	100	100.000	ENSMPUG00000006288	RBM42	100	98.661	Mustela_putorius_furo
ENSPPAG00000037315	RBM42	100	100.000	ENSMLUG00000011334	RBM42	100	97.065	Myotis_lucifugus
ENSPPAG00000037315	RBM42	100	100.000	ENSNGAG00000019698	Rbm42	99	96.868	Nannospalax_galili
ENSPPAG00000037315	RBM42	81	96.353	ENSNLEG00000011272	-	94	92.458	Nomascus_leucogenys
ENSPPAG00000037315	RBM42	90	100.000	ENSMEUG00000016300	RBM42	100	81.481	Notamacropus_eugenii
ENSPPAG00000037315	RBM42	100	100.000	ENSOPRG00000001229	RBM42	100	92.243	Ochotona_princeps
ENSPPAG00000037315	RBM42	100	100.000	ENSODEG00000013705	RBM42	99	97.991	Octodon_degus
ENSPPAG00000037315	RBM42	100	100.000	ENSOCUG00000003337	RBM42	100	97.561	Oryctolagus_cuniculus
ENSPPAG00000037315	RBM42	100	100.000	ENSOGAG00000004144	RBM42	100	97.484	Otolemur_garnettii
ENSPPAG00000037315	RBM42	99	100.000	ENSOARG00000004926	RBM42	99	93.096	Ovis_aries
ENSPPAG00000037315	RBM42	100	100.000	ENSPPRG00000016784	RBM42	100	100.000	Panthera_pardus
ENSPPAG00000037315	RBM42	100	100.000	ENSPTIG00000019270	RBM42	100	100.000	Panthera_tigris_altaica
ENSPPAG00000037315	RBM42	100	100.000	ENSPTRG00000010852	RBM42	100	100.000	Pan_troglodytes
ENSPPAG00000037315	RBM42	100	100.000	ENSPANG00000017032	RBM42	100	100.000	Papio_anubis
ENSPPAG00000037315	RBM42	100	100.000	ENSPEMG00000012065	Rbm42	99	97.904	Peromyscus_maniculatus_bairdii
ENSPPAG00000037315	RBM42	83	100.000	ENSPCIG00000015737	RBM42	100	82.675	Phascolarctos_cinereus
ENSPPAG00000037315	RBM42	100	100.000	ENSPPYG00000009871	RBM42	100	98.144	Pongo_abelii
ENSPPAG00000037315	RBM42	100	93.407	ENSPCAG00000013053	RBM42	100	84.696	Procavia_capensis
ENSPPAG00000037315	RBM42	97	81.068	ENSPCOG00000020672	RBM42	81	99.099	Propithecus_coquereli
ENSPPAG00000037315	RBM42	100	100.000	ENSPCOG00000026433	-	100	100.000	Propithecus_coquereli
ENSPPAG00000037315	RBM42	100	100.000	ENSPVAG00000012815	RBM42	100	98.113	Pteropus_vampyrus
ENSPPAG00000037315	RBM42	100	100.000	ENSRNOG00000024278	Rbm42	99	97.694	Rattus_norvegicus
ENSPPAG00000037315	RBM42	100	100.000	ENSRBIG00000007566	RBM42	100	100.000	Rhinopithecus_bieti
ENSPPAG00000037315	RBM42	100	100.000	ENSRROG00000042313	RBM42	100	100.000	Rhinopithecus_roxellana
ENSPPAG00000037315	RBM42	90	99.737	ENSSBOG00000030666	RBM42	100	99.754	Saimiri_boliviensis_boliviensis
ENSPPAG00000037315	RBM42	100	87.500	ENSSARG00000010724	RBM42	100	87.500	Sorex_araneus
ENSPPAG00000037315	RBM42	100	100.000	ENSSSCG00000002905	RBM42	100	97.991	Sus_scrofa
ENSPPAG00000037315	RBM42	100	100.000	ENSUAMG00000020711	RBM42	100	98.113	Ursus_americanus
ENSPPAG00000037315	RBM42	100	100.000	ENSUMAG00000020223	RBM42	100	98.113	Ursus_maritimus
ENSPPAG00000037315	RBM42	100	100.000	ENSVVUG00000015117	RBM42	100	98.438	Vulpes_vulpes