EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000037544 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 533 bases
Position: chr20:47137463-47137995
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000029044	LSM	PF01423.22	9.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000051892	-	237	-	ENSPPAP00000029044	78 (aa)	-	A0A2R9BHB3

Gene Model

Click here to download ENSPPAG00000037544's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000037544's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000037544	-	72	42.424	ENSPPAG00000037929	LSM6	83	42.424
ENSPPAG00000037544	-	88	75.000	ENSPPAG00000037479	-	91	73.529
ENSPPAG00000037544	-	83	78.667	ENSPPAG00000003072	-	98	80.952

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000037544	-	83	78.667	ENSG00000139343	SNRPF	98	80.952	Homo_sapiens
ENSPPAG00000037544	-	82	75.676	ENSAPOG00000003377	snrpf	65	78.313	Acanthochromis_polyacanthus
ENSPPAG00000037544	-	82	78.378	ENSAMEG00000002166	-	98	80.723	Ailuropoda_melanoleuca
ENSPPAG00000037544	-	85	71.053	ENSAMEG00000018718	-	98	73.810	Ailuropoda_melanoleuca
ENSPPAG00000037544	-	81	75.342	ENSACIG00000013216	snrpf	96	78.049	Amphilophus_citrinellus
ENSPPAG00000037544	-	81	75.342	ENSAOCG00000015108	snrpf	96	78.049	Amphiprion_ocellaris
ENSPPAG00000037544	-	81	75.342	ENSAPEG00000022022	snrpf	96	78.049	Amphiprion_percula
ENSPPAG00000037544	-	81	75.342	ENSATEG00000022625	snrpf	88	78.049	Anabas_testudineus
ENSPPAG00000037544	-	82	77.027	ENSACAG00000014073	SNRPF	95	79.518	Anolis_carolinensis
ENSPPAG00000037544	-	83	78.667	ENSANAG00000032845	SNRPF	98	80.952	Aotus_nancymaae
ENSPPAG00000037544	-	83	50.667	ENSANAG00000025860	-	97	54.762	Aotus_nancymaae
ENSPPAG00000037544	-	78	73.239	ENSANAG00000020297	-	76	74.699	Aotus_nancymaae
ENSPPAG00000037544	-	81	75.342	ENSACLG00000016066	snrpf	96	78.049	Astatotilapia_calliptera
ENSPPAG00000037544	-	83	73.333	ENSAMXG00000007421	snrpf	98	76.190	Astyanax_mexicanus
ENSPPAG00000037544	-	83	78.667	ENSBTAG00000016271	SNRPF	98	80.952	Bos_taurus
ENSPPAG00000037544	-	87	74.359	ENSBTAG00000050012	-	93	73.333	Bos_taurus
ENSPPAG00000037544	-	85	53.947	WBGene00004918	snr-5	87	53.165	Caenorhabditis_elegans
ENSPPAG00000037544	-	83	78.667	ENSCJAG00000002705	-	98	80.952	Callithrix_jacchus
ENSPPAG00000037544	-	81	71.233	ENSCAFG00000031151	-	98	75.000	Canis_familiaris
ENSPPAG00000037544	-	83	78.667	ENSCAFG00000006395	-	76	80.952	Canis_familiaris
ENSPPAG00000037544	-	87	69.231	ENSCAFG00020013161	-	83	69.231	Canis_lupus_dingo
ENSPPAG00000037544	-	81	71.233	ENSCAFG00020010823	-	98	75.000	Canis_lupus_dingo
ENSPPAG00000037544	-	83	72.222	ENSTSYG00000030635	-	98	75.309	Carlito_syrichta
ENSPPAG00000037544	-	90	78.750	ENSTSYG00000031636	-	67	78.750	Carlito_syrichta
ENSPPAG00000037544	-	83	73.684	ENSTSYG00000036502	-	98	76.471	Carlito_syrichta
ENSPPAG00000037544	-	82	78.378	ENSCAPG00000007242	SNRPF	98	80.723	Cavia_aperea
ENSPPAG00000037544	-	83	78.667	ENSCPOG00000013898	SNRPF	98	80.952	Cavia_porcellus
ENSPPAG00000037544	-	81	78.082	ENSCCAG00000017356	-	98	79.762	Cebus_capucinus
ENSPPAG00000037544	-	83	78.667	ENSCCAG00000037378	-	98	80.952	Cebus_capucinus
ENSPPAG00000037544	-	95	72.619	ENSCCAG00000033627	-	66	72.619	Cebus_capucinus
ENSPPAG00000037544	-	83	78.667	ENSCLAG00000007200	SNRPF	98	80.952	Chinchilla_lanigera
ENSPPAG00000037544	-	83	78.667	ENSCSAG00000003602	-	68	80.952	Chlorocebus_sabaeus
ENSPPAG00000037544	-	69	75.000	ENSCHOG00000009392	SNRPF	100	75.000	Choloepus_hoffmanni
ENSPPAG00000037544	-	95	71.429	ENSCPBG00000026463	-	98	71.429	Chrysemys_picta_bellii
ENSPPAG00000037544	-	95	69.048	ENSCPBG00000001985	-	98	69.048	Chrysemys_picta_bellii
ENSPPAG00000037544	-	94	74.699	ENSCPBG00000024287	-	65	74.699	Chrysemys_picta_bellii
ENSPPAG00000037544	-	83	73.333	ENSCPBG00000006227	-	98	75.000	Chrysemys_picta_bellii
ENSPPAG00000037544	-	94	68.675	ENSCSAVG00000007498	-	94	68.675	Ciona_savignyi
ENSPPAG00000037544	-	83	78.667	ENSCGRG00001017100	-	98	80.952	Cricetulus_griseus_chok1gshd
ENSPPAG00000037544	-	83	70.667	ENSCGRG00001008965	-	65	73.810	Cricetulus_griseus_chok1gshd
ENSPPAG00000037544	-	90	72.500	ENSCGRG00000018878	-	94	70.667	Cricetulus_griseus_crigri
ENSPPAG00000037544	-	83	78.667	ENSCGRG00000000336	-	98	80.952	Cricetulus_griseus_crigri
ENSPPAG00000037544	-	83	74.667	ENSCSEG00000004748	snrpf	98	77.381	Cynoglossus_semilaevis
ENSPPAG00000037544	-	82	75.676	ENSCVAG00000000397	snrpf	66	78.313	Cyprinodon_variegatus
ENSPPAG00000037544	-	83	74.026	ENSDARG00000105037	snrpf	98	76.744	Danio_rerio
ENSPPAG00000037544	-	83	77.333	ENSDNOG00000048989	-	75	79.762	Dasypus_novemcinctus
ENSPPAG00000037544	-	83	66.667	ENSDNOG00000049373	-	72	68.675	Dasypus_novemcinctus
ENSPPAG00000037544	-	83	78.667	ENSDNOG00000043775	-	54	80.952	Dasypus_novemcinctus
ENSPPAG00000037544	-	79	70.833	ENSDORG00000025351	-	100	70.833	Dipodomys_ordii
ENSPPAG00000037544	-	68	100.000	ENSDORG00000029740	-	65	100.000	Dipodomys_ordii
ENSPPAG00000037544	-	92	60.976	FBgn0000426	SmF	93	60.976	Drosophila_melanogaster
ENSPPAG00000037544	-	83	78.667	ENSETEG00000001558	-	98	80.952	Echinops_telfairi
ENSPPAG00000037544	-	95	57.143	ENSEBUG00000001793	-	72	64.179	Eptatretus_burgeri
ENSPPAG00000037544	-	83	78.667	ENSECAG00000019817	SNRPF	68	80.952	Equus_caballus
ENSPPAG00000037544	-	82	78.378	ENSEEUG00000013509	SNRPF	98	80.723	Erinaceus_europaeus
ENSPPAG00000037544	-	95	75.000	ENSELUG00000007737	RUXF	97	75.000	Esox_lucius
ENSPPAG00000037544	-	83	73.333	ENSELUG00000003121	RUXF	98	76.190	Esox_lucius
ENSPPAG00000037544	-	83	62.667	ENSFCAG00000021942	-	98	66.667	Felis_catus
ENSPPAG00000037544	-	83	78.667	ENSFCAG00000029966	-	98	80.952	Felis_catus
ENSPPAG00000037544	-	95	67.857	ENSFCAG00000031148	-	77	67.857	Felis_catus
ENSPPAG00000037544	-	82	78.378	ENSFALG00000010799	SNRPF	97	80.723	Ficedula_albicollis
ENSPPAG00000037544	-	83	78.667	ENSFDAG00000002831	-	98	80.952	Fukomys_damarensis
ENSPPAG00000037544	-	82	75.676	ENSFHEG00000003240	snrpf	73	78.313	Fundulus_heteroclitus
ENSPPAG00000037544	-	82	75.676	ENSGMOG00000007741	snrpf	98	78.313	Gadus_morhua
ENSPPAG00000037544	-	83	78.667	ENSGALG00000011409	SNRPF	98	80.952	Gallus_gallus
ENSPPAG00000037544	-	81	75.342	ENSGAFG00000016187	snrpf	94	78.049	Gambusia_affinis
ENSPPAG00000037544	-	82	74.324	ENSGACG00000020055	snrpf	98	77.108	Gasterosteus_aculeatus
ENSPPAG00000037544	-	69	90.741	ENSGAGG00000011163	-	89	90.741	Gopherus_agassizii
ENSPPAG00000037544	-	76	68.116	ENSGAGG00000014132	-	83	68.116	Gopherus_agassizii
ENSPPAG00000037544	-	79	77.778	ENSGAGG00000012945	-	75	75.000	Gopherus_agassizii
ENSPPAG00000037544	-	86	71.429	ENSGAGG00000022991	-	87	71.429	Gopherus_agassizii
ENSPPAG00000037544	-	67	70.968	ENSGAGG00000020974	-	52	70.968	Gopherus_agassizii
ENSPPAG00000037544	-	83	78.667	ENSGGOG00000001127	-	98	80.952	Gorilla_gorilla
ENSPPAG00000037544	-	88	77.465	ENSGGOG00000039564	-	90	76.119	Gorilla_gorilla
ENSPPAG00000037544	-	100	96.154	ENSGGOG00000039936	-	100	96.154	Gorilla_gorilla
ENSPPAG00000037544	-	83	77.333	ENSHGLG00000021172	-	98	79.762	Heterocephalus_glaber_female
ENSPPAG00000037544	-	83	78.667	ENSHGLG00000009108	SNRPF	98	80.952	Heterocephalus_glaber_female
ENSPPAG00000037544	-	83	77.333	ENSHGLG00100019596	-	98	79.762	Heterocephalus_glaber_male
ENSPPAG00000037544	-	82	78.378	ENSHGLG00100008103	-	98	80.723	Heterocephalus_glaber_male
ENSPPAG00000037544	-	68	62.857	ENSHCOG00000018663	snrpf	55	62.857	Hippocampus_comes
ENSPPAG00000037544	-	83	76.000	ENSIPUG00000018994	snrpf	98	78.571	Ictalurus_punctatus
ENSPPAG00000037544	-	83	78.667	ENSSTOG00000010434	-	98	80.952	Ictidomys_tridecemlineatus
ENSPPAG00000037544	-	76	86.441	ENSJJAG00000004828	-	88	86.441	Jaculus_jaculus
ENSPPAG00000037544	-	95	66.667	ENSJJAG00000004558	-	98	66.667	Jaculus_jaculus
ENSPPAG00000037544	-	83	78.667	ENSJJAG00000011272	-	98	80.952	Jaculus_jaculus
ENSPPAG00000037544	-	95	69.048	ENSJJAG00000010502	-	98	71.429	Jaculus_jaculus
ENSPPAG00000037544	-	83	74.667	ENSKMAG00000013566	snrpf	98	77.381	Kryptolebias_marmoratus
ENSPPAG00000037544	-	83	74.667	ENSLBEG00000008800	snrpf	98	77.381	Labrus_bergylta
ENSPPAG00000037544	-	83	77.333	ENSLACG00000002456	-	72	79.762	Latimeria_chalumnae
ENSPPAG00000037544	-	83	74.667	ENSLOCG00000015744	snrpf	98	77.381	Lepisosteus_oculatus
ENSPPAG00000037544	-	82	78.378	ENSLAFG00000017426	SNRPF	97	80.723	Loxodonta_africana
ENSPPAG00000037544	-	81	73.973	ENSMAMG00000016593	snrpf	96	76.829	Mastacembelus_armatus
ENSPPAG00000037544	-	81	75.342	ENSMZEG00005014701	snrpf	96	78.049	Maylandia_zebra
ENSPPAG00000037544	-	81	78.082	ENSMGAG00000011453	-	74	80.488	Meleagris_gallopavo
ENSPPAG00000037544	-	82	82.812	ENSMAUG00000010289	-	80	82.812	Mesocricetus_auratus
ENSPPAG00000037544	-	68	80.952	ENSMAUG00000016909	-	97	83.333	Mesocricetus_auratus
ENSPPAG00000037544	-	68	80.952	ENSMAUG00000019737	-	97	83.333	Mesocricetus_auratus
ENSPPAG00000037544	-	83	73.333	ENSMAUG00000008799	-	98	76.190	Mesocricetus_auratus
ENSPPAG00000037544	-	83	76.000	ENSMICG00000030494	-	67	78.571	Microcebus_murinus
ENSPPAG00000037544	-	83	78.667	ENSMICG00000012153	-	98	80.952	Microcebus_murinus
ENSPPAG00000037544	-	72	66.667	ENSMOCG00000020220	-	97	67.532	Microtus_ochrogaster
ENSPPAG00000037544	-	83	78.667	ENSMOCG00000020437	Snrpf	98	80.952	Microtus_ochrogaster
ENSPPAG00000037544	-	83	65.333	ENSMOCG00000022166	-	90	67.470	Microtus_ochrogaster
ENSPPAG00000037544	-	82	74.324	ENSMMOG00000007127	snrpf	98	77.108	Mola_mola
ENSPPAG00000037544	-	83	78.667	ENSMODG00000008091	SNRPF	74	80.952	Monodelphis_domestica
ENSPPAG00000037544	-	81	75.342	ENSMALG00000012328	snrpf	96	78.049	Monopterus_albus
ENSPPAG00000037544	-	83	78.667	MGP_CAROLIEiJ_G0015735	-	98	80.952	Mus_caroli
ENSPPAG00000037544	-	83	78.667	ENSMUSG00000020018	Snrpf	98	80.952	Mus_musculus
ENSPPAG00000037544	-	83	78.667	MGP_PahariEiJ_G0031350	Snrpf	98	80.952	Mus_pahari
ENSPPAG00000037544	-	83	78.667	MGP_SPRETEiJ_G0016553	Snrpf	98	80.952	Mus_spretus
ENSPPAG00000037544	-	83	78.667	ENSMPUG00000007176	-	75	80.952	Mustela_putorius_furo
ENSPPAG00000037544	-	83	78.667	ENSMLUG00000027932	-	79	80.952	Myotis_lucifugus
ENSPPAG00000037544	-	83	78.667	ENSMLUG00000026149	-	79	80.952	Myotis_lucifugus
ENSPPAG00000037544	-	83	78.667	ENSMLUG00000029201	-	79	80.952	Myotis_lucifugus
ENSPPAG00000037544	-	95	69.048	ENSMLUG00000026269	-	79	69.048	Myotis_lucifugus
ENSPPAG00000037544	-	82	78.378	ENSMLUG00000013577	-	98	80.723	Myotis_lucifugus
ENSPPAG00000037544	-	83	78.667	ENSNGAG00000024292	-	98	80.952	Nannospalax_galili
ENSPPAG00000037544	-	86	64.935	ENSNGAG00000005851	-	91	64.935	Nannospalax_galili
ENSPPAG00000037544	-	82	75.676	ENSNBRG00000011682	snrpf	85	78.313	Neolamprologus_brichardi
ENSPPAG00000037544	-	82	48.649	ENSMEUG00000000671	SNRPF	98	54.217	Notamacropus_eugenii
ENSPPAG00000037544	-	83	78.667	ENSODEG00000010328	-	98	80.952	Octodon_degus
ENSPPAG00000037544	-	83	77.333	ENSOCUG00000010925	SNRPF	74	79.762	Oryctolagus_cuniculus
ENSPPAG00000037544	-	82	72.973	ENSORLG00020008216	snrpf	98	75.904	Oryzias_latipes_hni
ENSPPAG00000037544	-	82	72.973	ENSORLG00015007418	snrpf	98	75.904	Oryzias_latipes_hsok
ENSPPAG00000037544	-	81	73.973	ENSOMEG00000003018	snrpf	96	76.829	Oryzias_melastigma
ENSPPAG00000037544	-	83	77.333	ENSOGAG00000030323	-	98	79.762	Otolemur_garnettii
ENSPPAG00000037544	-	83	78.667	ENSOARG00000011853	-	73	80.952	Ovis_aries
ENSPPAG00000037544	-	83	78.667	ENSPPRG00000005875	-	98	80.952	Panthera_pardus
ENSPPAG00000037544	-	95	66.667	ENSPPRG00000007449	-	86	66.667	Panthera_pardus
ENSPPAG00000037544	-	83	78.667	ENSPTIG00000007520	SNRPF	98	80.952	Panthera_tigris_altaica
ENSPPAG00000037544	-	95	69.048	ENSPTIG00000005117	-	100	69.048	Panthera_tigris_altaica
ENSPPAG00000037544	-	88	73.611	ENSPTRG00000047717	-	91	72.059	Pan_troglodytes
ENSPPAG00000037544	-	100	100.000	ENSPTRG00000043814	-	100	100.000	Pan_troglodytes
ENSPPAG00000037544	-	82	75.676	ENSPKIG00000014784	snrpf	91	78.313	Paramormyrops_kingsleyae
ENSPPAG00000037544	-	82	78.378	ENSPSIG00000016462	SNRPF	97	80.723	Pelodiscus_sinensis
ENSPPAG00000037544	-	82	74.324	ENSPMGG00000023548	snrpf	98	77.108	Periophthalmus_magnuspinnatus
ENSPPAG00000037544	-	83	78.667	ENSPEMG00000023326	Snrpf	98	80.952	Peromyscus_maniculatus_bairdii
ENSPPAG00000037544	-	81	75.342	ENSPLAG00000023932	snrpf	96	78.049	Poecilia_latipinna
ENSPPAG00000037544	-	81	75.342	ENSPMEG00000003377	snrpf	96	78.049	Poecilia_mexicana
ENSPPAG00000037544	-	81	75.342	ENSPREG00000022635	snrpf	94	78.049	Poecilia_reticulata
ENSPPAG00000037544	-	83	78.667	ENSPPYG00000004847	-	98	80.952	Pongo_abelii
ENSPPAG00000037544	-	83	78.667	ENSPCOG00000023833	-	98	80.952	Propithecus_coquereli
ENSPPAG00000037544	-	83	78.667	ENSPVAG00000009036	SNRPF	98	80.952	Pteropus_vampyrus
ENSPPAG00000037544	-	81	75.342	ENSPNYG00000021712	snrpf	96	78.049	Pundamilia_nyererei
ENSPPAG00000037544	-	81	73.973	ENSPNAG00000019117	snrpf	96	76.829	Pygocentrus_nattereri
ENSPPAG00000037544	-	83	78.667	ENSRNOG00000005556	Snrpf	98	80.952	Rattus_norvegicus
ENSPPAG00000037544	-	83	76.000	ENSRBIG00000030414	-	98	77.381	Rhinopithecus_bieti
ENSPPAG00000037544	-	83	76.000	ENSRROG00000021975	-	98	77.381	Rhinopithecus_roxellana
ENSPPAG00000037544	-	76	44.286	YPR182W	SMX3	81	44.286	Saccharomyces_cerevisiae
ENSPPAG00000037544	-	83	78.667	ENSSBOG00000012868	-	98	79.762	Saimiri_boliviensis_boliviensis
ENSPPAG00000037544	-	87	66.667	ENSSBOG00000027638	-	98	68.966	Saimiri_boliviensis_boliviensis
ENSPPAG00000037544	-	83	67.647	ENSSBOG00000032297	-	97	70.130	Saimiri_boliviensis_boliviensis
ENSPPAG00000037544	-	83	78.667	ENSSBOG00000036179	-	98	80.952	Saimiri_boliviensis_boliviensis
ENSPPAG00000037544	-	82	78.378	ENSSHAG00000012294	SNRPF	75	80.723	Sarcophilus_harrisii
ENSPPAG00000037544	-	69	71.875	ENSSFOG00015021523	snrpf	96	71.875	Scleropages_formosus
ENSPPAG00000037544	-	83	73.333	ENSSMAG00000005533	snrpf	97	76.190	Scophthalmus_maximus
ENSPPAG00000037544	-	71	72.308	ENSSDUG00000016283	snrpf	77	72.308	Seriola_dumerili
ENSPPAG00000037544	-	90	56.250	ENSSLDG00000003885	-	90	58.108	Seriola_lalandi_dorsalis
ENSPPAG00000037544	-	83	74.667	ENSSLDG00000005119	snrpf	98	77.381	Seriola_lalandi_dorsalis
ENSPPAG00000037544	-	81	78.082	ENSSPUG00000014590	-	96	80.488	Sphenodon_punctatus
ENSPPAG00000037544	-	82	75.676	ENSSPAG00000003283	snrpf	94	78.313	Stegastes_partitus
ENSPPAG00000037544	-	83	78.667	ENSSSCG00000000895	SNRPF	98	80.952	Sus_scrofa
ENSPPAG00000037544	-	58	93.333	ENSTRUG00000014956	snrpf	86	88.136	Takifugu_rubripes
ENSPPAG00000037544	-	83	74.667	ENSTNIG00000012672	snrpf	98	77.381	Tetraodon_nigroviridis
ENSPPAG00000037544	-	83	49.333	ENSTTRG00000006070	SNRPF	98	54.762	Tursiops_truncatus
ENSPPAG00000037544	-	95	73.810	ENSUAMG00000001101	-	98	72.619	Ursus_americanus
ENSPPAG00000037544	-	83	78.667	ENSUAMG00000008176	-	98	80.952	Ursus_americanus
ENSPPAG00000037544	-	83	73.333	ENSUMAG00000006177	-	98	72.619	Ursus_maritimus
ENSPPAG00000037544	-	83	78.667	ENSUMAG00000003528	-	98	80.952	Ursus_maritimus
ENSPPAG00000037544	-	83	78.667	ENSVPAG00000008712	-	98	80.952	Vicugna_pacos
ENSPPAG00000037544	-	87	71.795	ENSVVUG00000023821	-	96	70.667	Vulpes_vulpes
ENSPPAG00000037544	-	82	53.947	ENSXETG00000021630	snrpf	98	56.471	Xenopus_tropicalis
ENSPPAG00000037544	-	81	75.342	ENSXCOG00000013860	snrpf	94	78.049	Xiphophorus_couchianus
ENSPPAG00000037544	-	81	75.342	ENSXMAG00000015448	snrpf	96	78.049	Xiphophorus_maculatus