EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000037938 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: 60S ribosomal protein L7a pseudogene
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 6192 bases
Position: chr4:115844717-115850908
Accession: 100983177
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000029847	Ribosomal_L7Ae	PF01248.26	1.8e-13	1	1
ENSPPAP00000029873	Ribosomal_L7Ae	PF01248.26	3e-13	1	1
ENSPPAP00000029864	Ribosomal_L7Ae	PF01248.26	1.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000052699	-	555	-	ENSPPAP00000029847	184 (aa)	-	A0A2R9BN45
ENSPPAT00000052716	-	396	-	ENSPPAP00000029864	131 (aa)	-	A0A2R9BJL0
ENSPPAT00000052725	-	738	-	ENSPPAP00000029873	245 (aa)	-	A0A2R9BKG6

Gene Model

Click here to download ENSPPAG00000037938's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000037938's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000037938	-	100	81.890	ENSPPAG00000030172	-	99	79.902
ENSPPAG00000037938	-	100	81.579	ENSPPAG00000040924	-	100	81.579
ENSPPAG00000037938	-	100	77.632	ENSPPAG00000035063	-	100	77.632
ENSPPAG00000037938	-	100	89.474	ENSPPAG00000018940	-	100	89.474
ENSPPAG00000037938	-	98	79.447	ENSPPAG00000029689	-	97	80.488
ENSPPAG00000037938	-	97	80.402	ENSPPAG00000031189	-	97	80.808

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000037938	-	99	83.251	ENSAPLG00000005247	RPL7A	94	87.059	Anas_platyrhynchos
ENSPPAG00000037938	-	100	76.336	ENSANAG00000035965	-	96	76.096	Aotus_nancymaae
ENSPPAG00000037938	-	100	79.605	ENSANAG00000021362	-	100	79.605	Aotus_nancymaae
ENSPPAG00000037938	-	99	77.340	ENSAMXG00000012525	rpl7a	96	80.000	Astyanax_mexicanus
ENSPPAG00000037938	-	94	78.351	ENSBTAG00000047286	-	85	78.351	Bos_taurus
ENSPPAG00000037938	-	98	79.703	ENSCJAG00000048127	-	96	81.961	Callithrix_jacchus
ENSPPAG00000037938	-	92	90.625	ENSCJAG00000014827	-	61	90.625	Callithrix_jacchus
ENSPPAG00000037938	-	99	89.051	ENSCJAG00000039516	-	91	89.051	Callithrix_jacchus
ENSPPAG00000037938	-	93	89.147	ENSCJAG00000040821	-	88	89.147	Callithrix_jacchus
ENSPPAG00000037938	-	100	78.947	ENSCJAG00000044259	-	100	78.947	Callithrix_jacchus
ENSPPAG00000037938	-	98	83.399	ENSCHIG00000023018	-	94	83.740	Capra_hircus
ENSPPAG00000037938	-	93	74.419	ENSTSYG00000029336	-	88	74.419	Carlito_syrichta
ENSPPAG00000037938	-	93	86.822	ENSCCAG00000033718	-	96	79.608	Cebus_capucinus
ENSPPAG00000037938	-	92	57.252	ENSCCAG00000035068	-	87	57.252	Cebus_capucinus
ENSPPAG00000037938	-	93	90.698	ENSCATG00000032659	-	88	90.698	Cercocebus_atys
ENSPPAG00000037938	-	93	88.372	ENSCATG00000031343	-	85	88.372	Cercocebus_atys
ENSPPAG00000037938	-	93	90.698	ENSCSAG00000019115	-	96	87.059	Chlorocebus_sabaeus
ENSPPAG00000037938	-	93	84.426	ENSCSAG00000005053	-	96	81.855	Chlorocebus_sabaeus
ENSPPAG00000037938	-	92	84.375	ENSCSAG00000018506	-	95	81.102	Chlorocebus_sabaeus
ENSPPAG00000037938	-	100	75.940	ENSCSAG00000018485	-	96	75.686	Chlorocebus_sabaeus
ENSPPAG00000037938	-	99	83.744	ENSCPBG00000021161	-	96	87.451	Chrysemys_picta_bellii
ENSPPAG00000037938	-	98	84.577	ENSCGRG00001020617	-	96	82.353	Cricetulus_griseus_chok1gshd
ENSPPAG00000037938	-	96	78.629	ENSCGRG00000003429	-	95	78.629	Cricetulus_griseus_crigri
ENSPPAG00000037938	-	99	79.803	ENSDARG00000019230	rpl7a	96	82.745	Danio_rerio
ENSPPAG00000037938	-	92	73.016	ENSDNOG00000030713	-	94	62.447	Dasypus_novemcinctus
ENSPPAG00000037938	-	95	74.611	ENSDORG00000027559	-	89	75.962	Dipodomys_ordii
ENSPPAG00000037938	-	98	69.478	ENSEBUG00000015826	rpl7a	95	69.959	Eptatretus_burgeri
ENSPPAG00000037938	-	96	82.353	ENSELUG00000023023	rpl7a	96	82.353	Esox_lucius
ENSPPAG00000037938	-	92	66.667	ENSFCAG00000029566	-	93	66.667	Felis_catus
ENSPPAG00000037938	-	95	73.485	ENSFCAG00000026737	-	95	74.667	Felis_catus
ENSPPAG00000037938	-	93	88.372	ENSFALG00000001502	-	84	86.275	Ficedula_albicollis
ENSPPAG00000037938	-	93	89.147	ENSGAGG00000010277	-	92	86.667	Gopherus_agassizii
ENSPPAG00000037938	-	100	97.959	ENSGGOG00000026585	-	100	97.959	Gorilla_gorilla
ENSPPAG00000037938	-	100	79.605	ENSGGOG00000023680	-	100	79.605	Gorilla_gorilla
ENSPPAG00000037938	-	93	88.550	ENSGGOG00000025516	-	85	88.550	Gorilla_gorilla
ENSPPAG00000037938	-	98	67.327	ENSHGLG00000012167	-	100	67.686	Heterocephalus_glaber_female
ENSPPAG00000037938	-	99	75.521	ENSHGLG00000018482	-	95	77.049	Heterocephalus_glaber_female
ENSPPAG00000037938	-	100	89.098	ENSHGLG00000013590	RPL7A	100	89.098	Heterocephalus_glaber_female
ENSPPAG00000037938	-	100	89.098	ENSHGLG00100007783	RPL7A	100	89.098	Heterocephalus_glaber_male
ENSPPAG00000037938	-	98	67.327	ENSHGLG00100007133	-	100	67.686	Heterocephalus_glaber_male
ENSPPAG00000037938	-	99	75.521	ENSHGLG00100004197	-	95	77.049	Heterocephalus_glaber_male
ENSPPAG00000037938	-	99	76.847	ENSIPUG00000008146	rpl7a	96	80.392	Ictalurus_punctatus
ENSPPAG00000037938	-	100	78.968	ENSSTOG00000031997	-	100	78.968	Ictidomys_tridecemlineatus
ENSPPAG00000037938	-	92	85.366	ENSJJAG00000016802	-	98	80.882	Jaculus_jaculus
ENSPPAG00000037938	-	100	73.047	ENSJJAG00000022569	-	100	73.047	Jaculus_jaculus
ENSPPAG00000037938	-	98	71.277	ENSJJAG00000012899	-	99	75.214	Jaculus_jaculus
ENSPPAG00000037938	-	95	86.400	ENSJJAG00000014376	-	95	81.667	Jaculus_jaculus
ENSPPAG00000037938	-	96	79.710	ENSJJAG00000024026	-	96	80.816	Jaculus_jaculus
ENSPPAG00000037938	-	99	79.310	ENSLACG00000018224	rpl7a	92	82.745	Latimeria_chalumnae
ENSPPAG00000037938	-	99	89.773	ENSLAFG00000006436	-	98	89.773	Loxodonta_africana
ENSPPAG00000037938	-	99	84.729	ENSMFAG00000027988	-	96	88.235	Macaca_fascicularis
ENSPPAG00000037938	-	93	90.698	ENSMFAG00000044607	-	96	84.314	Macaca_fascicularis
ENSPPAG00000037938	-	93	89.922	ENSMMUG00000012379	-	85	89.922	Macaca_mulatta
ENSPPAG00000037938	-	93	90.698	ENSMMUG00000049182	-	96	84.706	Macaca_mulatta
ENSPPAG00000037938	-	99	86.802	ENSMNEG00000025946	-	96	89.558	Macaca_nemestrina
ENSPPAG00000037938	-	93	90.698	ENSMNEG00000037496	-	88	90.698	Macaca_nemestrina
ENSPPAG00000037938	-	93	90.698	ENSMNEG00000005027	-	96	87.451	Macaca_nemestrina
ENSPPAG00000037938	-	98	78.756	ENSMLEG00000012582	-	96	83.333	Mandrillus_leucophaeus
ENSPPAG00000037938	-	93	75.969	ENSMAUG00000019197	-	85	75.969	Mesocricetus_auratus
ENSPPAG00000037938	-	93	90.698	ENSMICG00000026491	-	84	90.698	Microcebus_murinus
ENSPPAG00000037938	-	99	84.729	ENSMOCG00000008541	-	96	87.451	Microtus_ochrogaster
ENSPPAG00000037938	-	99	55.941	ENSMPUG00000009401	-	94	57.874	Mustela_putorius_furo
ENSPPAG00000037938	-	100	68.679	ENSMPUG00000017429	-	98	68.679	Mustela_putorius_furo
ENSPPAG00000037938	-	99	86.861	ENSMPUG00000012398	-	99	86.861	Mustela_putorius_furo
ENSPPAG00000037938	-	92	68.000	ENSMPUG00000012594	-	94	59.677	Mustela_putorius_furo
ENSPPAG00000037938	-	99	65.909	ENSMPUG00000003699	-	94	65.490	Mustela_putorius_furo
ENSPPAG00000037938	-	98	76.166	ENSNLEG00000030063	-	96	80.081	Nomascus_leucogenys
ENSPPAG00000037938	-	100	78.947	ENSNLEG00000030901	-	100	78.947	Nomascus_leucogenys
ENSPPAG00000037938	-	96	86.275	ENSNLEG00000030504	-	96	86.275	Nomascus_leucogenys
ENSPPAG00000037938	-	93	89.147	ENSMEUG00000014550	-	96	86.667	Notamacropus_eugenii
ENSPPAG00000037938	-	97	82.000	ENSOANG00000007060	-	91	84.388	Ornithorhynchus_anatinus
ENSPPAG00000037938	-	91	70.400	ENSOCUG00000025450	-	99	64.348	Oryctolagus_cuniculus
ENSPPAG00000037938	-	92	73.600	ENSOCUG00000027027	-	100	66.055	Oryctolagus_cuniculus
ENSPPAG00000037938	-	93	86.822	ENSOCUG00000022874	-	96	84.646	Oryctolagus_cuniculus
ENSPPAG00000037938	-	93	89.147	ENSOGAG00000007682	-	96	83.922	Otolemur_garnettii
ENSPPAG00000037938	-	92	63.281	ENSOGAG00000029360	-	95	54.583	Otolemur_garnettii
ENSPPAG00000037938	-	92	90.625	ENSOARG00000003677	-	96	85.659	Ovis_aries
ENSPPAG00000037938	-	98	82.443	ENSOARG00000004560	-	95	82.745	Ovis_aries
ENSPPAG00000037938	-	100	63.448	ENSPPRG00000008233	-	100	63.448	Panthera_pardus
ENSPPAG00000037938	-	98	79.447	ENSPTRG00000047886	-	97	80.488	Pan_troglodytes
ENSPPAG00000037938	-	86	80.000	ENSPTRG00000044655	-	99	80.000	Pan_troglodytes
ENSPPAG00000037938	-	100	76.316	ENSPTRG00000049410	-	100	76.316	Pan_troglodytes
ENSPPAG00000037938	-	98	84.653	ENSPTRG00000029310	-	96	87.843	Pan_troglodytes
ENSPPAG00000037938	-	100	99.184	ENSPTRG00000051913	-	100	99.184	Pan_troglodytes
ENSPPAG00000037938	-	93	89.922	ENSPANG00000034498	-	88	89.922	Papio_anubis
ENSPPAG00000037938	-	93	90.698	ENSPANG00000003750	-	85	90.698	Papio_anubis
ENSPPAG00000037938	-	93	89.147	ENSPEMG00000013592	-	88	89.147	Peromyscus_maniculatus_bairdii
ENSPPAG00000037938	-	98	83.065	ENSPCIG00000026434	-	95	83.402	Phascolarctos_cinereus
ENSPPAG00000037938	-	99	83.069	ENSPCOG00000004337	-	96	86.307	Propithecus_coquereli
ENSPPAG00000037938	-	99	77.340	ENSPNAG00000029194	rpl7a	99	78.571	Pygocentrus_nattereri
ENSPPAG00000037938	-	93	89.922	ENSRNOG00000033652	AABR07045321.1	96	86.275	Rattus_norvegicus
ENSPPAG00000037938	-	96	85.490	ENSRNOG00000029130	AABR07057586.1	96	85.490	Rattus_norvegicus
ENSPPAG00000037938	-	98	75.875	ENSRNOG00000014425	AABR07054456.1	97	75.600	Rattus_norvegicus
ENSPPAG00000037938	-	93	89.147	ENSRNOG00000028826	AC128901.1	96	85.882	Rattus_norvegicus
ENSPPAG00000037938	-	98	86.538	ENSRNOG00000029423	AABR07052519.1	96	86.667	Rattus_norvegicus
ENSPPAG00000037938	-	100	77.444	ENSRNOG00000022718	AC094246.2	96	77.647	Rattus_norvegicus
ENSPPAG00000037938	-	93	88.372	ENSRNOG00000031902	AABR07027819.1	96	85.490	Rattus_norvegicus
ENSPPAG00000037938	-	96	85.882	ENSRNOG00000031532	AABR07018167.1	96	85.882	Rattus_norvegicus
ENSPPAG00000037938	-	93	89.147	ENSRNOG00000029310	AABR07049918.1	96	84.314	Rattus_norvegicus
ENSPPAG00000037938	-	90	80.000	ENSRBIG00000037343	-	93	82.949	Rhinopithecus_bieti
ENSPPAG00000037938	-	99	81.281	ENSRBIG00000010998	-	96	84.706	Rhinopithecus_bieti
ENSPPAG00000037938	-	93	91.473	ENSRBIG00000007002	-	83	91.473	Rhinopithecus_bieti
ENSPPAG00000037938	-	90	80.000	ENSRROG00000041577	-	93	82.949	Rhinopithecus_roxellana
ENSPPAG00000037938	-	93	90.698	ENSRROG00000035341	-	84	90.698	Rhinopithecus_roxellana
ENSPPAG00000037938	-	100	73.308	ENSSBOG00000033255	-	100	73.308	Saimiri_boliviensis_boliviensis
ENSPPAG00000037938	-	84	65.812	ENSSSCG00000034232	-	93	67.568	Sus_scrofa
ENSPPAG00000037938	-	93	88.372	ENSTGUG00000005463	-	95	86.275	Taeniopygia_guttata
ENSPPAG00000037938	-	93	83.721	ENSTNIG00000007501	rpl7a	95	81.961	Tetraodon_nigroviridis
ENSPPAG00000037938	-	93	75.000	ENSTBEG00000003344	-	85	75.000	Tupaia_belangeri