EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPPAG00000037958 (Gene tree)
Gene ID: 100979068
Gene Symbol: RCL1
Alias: -
Full Name: RNA terminal phosphate cyclase like 1
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Plus strand
Length: 67674 bases
Position: chr9:4813750-4881423
Accession: 100979068
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000029878	RTC	PF01137.21	3.6e-61	1	1
ENSPPAP00000029878	RTC_insert	PF05189.13	9.5e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000052730	RCL1-201	2184	XM_003823366	ENSPPAP00000029878	373 (aa)	XP_003823414	A0A2R9BKG8

Gene Model

Click here to download ENSPPAG00000037958's gene model file

Pathways

Pathway ID	Pathway Name	Source
pps03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000037958's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000037958	RCL1	100	99.732	ENSG00000120158	RCL1	100	100.000	Homo_sapiens
ENSPPAG00000037958	RCL1	100	79.144	ENSAPOG00000015666	rcl1	100	79.144	Acanthochromis_polyacanthus
ENSPPAG00000037958	RCL1	100	97.319	ENSAMEG00000002631	RCL1	100	97.319	Ailuropoda_melanoleuca
ENSPPAG00000037958	RCL1	99	79.189	ENSACIG00000021195	rcl1	99	79.189	Amphilophus_citrinellus
ENSPPAG00000037958	RCL1	100	78.610	ENSAOCG00000002223	rcl1	100	78.610	Amphiprion_ocellaris
ENSPPAG00000037958	RCL1	100	78.877	ENSAPEG00000006905	rcl1	100	78.877	Amphiprion_percula
ENSPPAG00000037958	RCL1	99	76.486	ENSATEG00000020026	rcl1	99	76.486	Anabas_testudineus
ENSPPAG00000037958	RCL1	88	87.195	ENSAPLG00000006031	RCL1	100	87.195	Anas_platyrhynchos
ENSPPAG00000037958	RCL1	100	85.523	ENSACAG00000003640	RCL1	100	85.523	Anolis_carolinensis
ENSPPAG00000037958	RCL1	100	98.660	ENSANAG00000037372	RCL1	100	98.660	Aotus_nancymaae
ENSPPAG00000037958	RCL1	99	78.649	ENSACLG00000021724	rcl1	99	78.649	Astatotilapia_calliptera
ENSPPAG00000037958	RCL1	98	78.804	ENSAMXG00000033394	rcl1	99	78.804	Astyanax_mexicanus
ENSPPAG00000037958	RCL1	99	47.074	WBGene00022852	ZK1127.5	99	47.074	Caenorhabditis_elegans
ENSPPAG00000037958	RCL1	100	99.464	ENSCJAG00000011202	RCL1	100	99.464	Callithrix_jacchus
ENSPPAG00000037958	RCL1	100	96.247	ENSCAFG00000002091	RCL1	100	96.247	Canis_familiaris
ENSPPAG00000037958	RCL1	100	96.247	ENSCAFG00020000638	RCL1	78	96.247	Canis_lupus_dingo
ENSPPAG00000037958	RCL1	100	96.247	ENSCHIG00000012407	RCL1	100	96.247	Capra_hircus
ENSPPAG00000037958	RCL1	88	98.777	ENSTSYG00000009592	RCL1	97	97.790	Carlito_syrichta
ENSPPAG00000037958	RCL1	68	80.925	ENSCAPG00000013575	RCL1	100	80.925	Cavia_aperea
ENSPPAG00000037958	RCL1	100	97.051	ENSCPOG00000015354	RCL1	100	97.051	Cavia_porcellus
ENSPPAG00000037958	RCL1	100	99.464	ENSCCAG00000033505	RCL1	100	99.464	Cebus_capucinus
ENSPPAG00000037958	RCL1	100	98.660	ENSCATG00000034721	RCL1	100	98.660	Cercocebus_atys
ENSPPAG00000037958	RCL1	100	97.319	ENSCLAG00000007445	RCL1	100	97.319	Chinchilla_lanigera
ENSPPAG00000037958	RCL1	100	99.196	ENSCSAG00000008811	RCL1	100	99.196	Chlorocebus_sabaeus
ENSPPAG00000037958	RCL1	87	82.043	ENSCHOG00000007216	RCL1	100	82.043	Choloepus_hoffmanni
ENSPPAG00000037958	RCL1	100	89.544	ENSCPBG00000025481	RCL1	94	89.362	Chrysemys_picta_bellii
ENSPPAG00000037958	RCL1	98	58.649	ENSCING00000019565	-	98	58.649	Ciona_intestinalis
ENSPPAG00000037958	RCL1	100	99.464	ENSCANG00000027099	RCL1	100	99.464	Colobus_angolensis_palliatus
ENSPPAG00000037958	RCL1	100	95.979	ENSCGRG00001013748	Rcl1	100	95.979	Cricetulus_griseus_chok1gshd
ENSPPAG00000037958	RCL1	88	96.037	ENSCGRG00000005843	Rcl1	99	96.037	Cricetulus_griseus_crigri
ENSPPAG00000037958	RCL1	99	79.730	ENSCSEG00000000712	rcl1	97	79.730	Cynoglossus_semilaevis
ENSPPAG00000037958	RCL1	99	80.270	ENSCVAG00000011536	rcl1	99	80.270	Cyprinodon_variegatus
ENSPPAG00000037958	RCL1	98	76.294	ENSDARG00000038312	rcl1	100	76.294	Danio_rerio
ENSPPAG00000037958	RCL1	71	96.981	ENSDNOG00000019911	RCL1	100	96.981	Dasypus_novemcinctus
ENSPPAG00000037958	RCL1	100	96.515	ENSDORG00000015645	Rcl1	100	96.515	Dipodomys_ordii
ENSPPAG00000037958	RCL1	99	53.704	FBgn0020909	Rtc1	98	53.704	Drosophila_melanogaster
ENSPPAG00000037958	RCL1	72	100.000	ENSETEG00000014087	-	82	100.000	Echinops_telfairi
ENSPPAG00000037958	RCL1	100	53.600	ENSEBUG00000016621	-	100	53.600	Eptatretus_burgeri
ENSPPAG00000037958	RCL1	100	97.587	ENSEASG00005010653	RCL1	100	97.587	Equus_asinus_asinus
ENSPPAG00000037958	RCL1	100	97.587	ENSECAG00000015973	RCL1	100	97.587	Equus_caballus
ENSPPAG00000037958	RCL1	100	81.769	ENSEEUG00000009801	RCL1	100	81.769	Erinaceus_europaeus
ENSPPAG00000037958	RCL1	100	75.668	ENSELUG00000007353	rcl1	100	75.668	Esox_lucius
ENSPPAG00000037958	RCL1	100	95.442	ENSFCAG00000014557	RCL1	100	95.442	Felis_catus
ENSPPAG00000037958	RCL1	95	82.817	ENSFALG00000010553	RCL1	94	82.817	Ficedula_albicollis
ENSPPAG00000037958	RCL1	88	96.636	ENSFDAG00000004209	RCL1	100	96.636	Fukomys_damarensis
ENSPPAG00000037958	RCL1	99	79.730	ENSFHEG00000011228	rcl1	99	79.730	Fundulus_heteroclitus
ENSPPAG00000037958	RCL1	99	77.297	ENSGMOG00000004677	rcl1	99	77.568	Gadus_morhua
ENSPPAG00000037958	RCL1	99	86.450	ENSGALG00000015024	RCL1	99	86.450	Gallus_gallus
ENSPPAG00000037958	RCL1	99	78.108	ENSGAFG00000007257	rcl1	99	78.108	Gambusia_affinis
ENSPPAG00000037958	RCL1	100	77.273	ENSGACG00000017474	rcl1	100	77.273	Gasterosteus_aculeatus
ENSPPAG00000037958	RCL1	100	90.080	ENSGAGG00000003689	RCL1	100	90.080	Gopherus_agassizii
ENSPPAG00000037958	RCL1	100	99.196	ENSGGOG00000015041	RCL1	100	99.196	Gorilla_gorilla
ENSPPAG00000037958	RCL1	99	78.919	ENSHBUG00000001393	rcl1	99	78.919	Haplochromis_burtoni
ENSPPAG00000037958	RCL1	100	97.319	ENSHGLG00000016452	RCL1	100	97.319	Heterocephalus_glaber_female
ENSPPAG00000037958	RCL1	100	81.233	ENSHGLG00000005368	-	100	80.697	Heterocephalus_glaber_female
ENSPPAG00000037958	RCL1	100	82.306	ENSHGLG00100018010	-	100	81.769	Heterocephalus_glaber_male
ENSPPAG00000037958	RCL1	100	90.617	ENSHGLG00100008718	-	100	90.617	Heterocephalus_glaber_male
ENSPPAG00000037958	RCL1	99	78.108	ENSHCOG00000020170	rcl1	99	78.108	Hippocampus_comes
ENSPPAG00000037958	RCL1	98	79.620	ENSIPUG00000018054	RCL1	99	79.620	Ictalurus_punctatus
ENSPPAG00000037958	RCL1	100	97.319	ENSSTOG00000000023	RCL1	100	97.319	Ictidomys_tridecemlineatus
ENSPPAG00000037958	RCL1	100	95.442	ENSJJAG00000022803	-	100	95.442	Jaculus_jaculus
ENSPPAG00000037958	RCL1	100	84.450	ENSJJAG00000015632	-	100	84.450	Jaculus_jaculus
ENSPPAG00000037958	RCL1	54	72.637	ENSJJAG00000000764	-	95	72.680	Jaculus_jaculus
ENSPPAG00000037958	RCL1	98	77.929	ENSKMAG00000011946	rcl1	99	77.929	Kryptolebias_marmoratus
ENSPPAG00000037958	RCL1	99	76.216	ENSLBEG00000003957	rcl1	99	76.216	Labrus_bergylta
ENSPPAG00000037958	RCL1	91	81.121	ENSLACG00000004594	RCL1	98	85.174	Latimeria_chalumnae
ENSPPAG00000037958	RCL1	100	81.501	ENSLOCG00000010148	rcl1	98	81.501	Lepisosteus_oculatus
ENSPPAG00000037958	RCL1	100	93.566	ENSLAFG00000017495	RCL1	100	93.566	Loxodonta_africana
ENSPPAG00000037958	RCL1	100	99.196	ENSMFAG00000037906	RCL1	100	99.196	Macaca_fascicularis
ENSPPAG00000037958	RCL1	100	99.196	ENSMNEG00000012288	RCL1	100	99.196	Macaca_nemestrina
ENSPPAG00000037958	RCL1	100	99.196	ENSMLEG00000043088	RCL1	100	99.196	Mandrillus_leucophaeus
ENSPPAG00000037958	RCL1	99	78.919	ENSMAMG00000008311	rcl1	99	78.919	Mastacembelus_armatus
ENSPPAG00000037958	RCL1	99	78.649	ENSMZEG00005017292	rcl1	99	78.649	Maylandia_zebra
ENSPPAG00000037958	RCL1	58	84.018	ENSMGAG00000002245	RCL1	97	83.962	Meleagris_gallopavo
ENSPPAG00000037958	RCL1	58	96.279	ENSMAUG00000008922	Rcl1	100	96.279	Mesocricetus_auratus
ENSPPAG00000037958	RCL1	100	96.783	ENSMICG00000015562	RCL1	100	96.783	Microcebus_murinus
ENSPPAG00000037958	RCL1	100	97.051	ENSMOCG00000012145	Rcl1	100	97.051	Microtus_ochrogaster
ENSPPAG00000037958	RCL1	99	75.741	ENSMMOG00000021264	rcl1	99	75.741	Mola_mola
ENSPPAG00000037958	RCL1	95	93.521	ENSMODG00000015377	RCL1	94	93.521	Monodelphis_domestica
ENSPPAG00000037958	RCL1	99	77.568	ENSMALG00000018618	rcl1	99	77.568	Monopterus_albus
ENSPPAG00000037958	RCL1	100	96.783	MGP_CAROLIEiJ_G0022853	Rcl1	100	96.783	Mus_caroli
ENSPPAG00000037958	RCL1	100	96.783	ENSMUSG00000024785	Rcl1	100	96.783	Mus_musculus
ENSPPAG00000037958	RCL1	100	96.247	MGP_PahariEiJ_G0014346	Rcl1	100	97.059	Mus_pahari
ENSPPAG00000037958	RCL1	100	95.979	MGP_SPRETEiJ_G0023771	Rcl1	100	96.471	Mus_spretus
ENSPPAG00000037958	RCL1	100	96.247	ENSMPUG00000004998	RCL1	100	96.247	Mustela_putorius_furo
ENSPPAG00000037958	RCL1	100	96.783	ENSMLUG00000009654	RCL1	100	96.783	Myotis_lucifugus
ENSPPAG00000037958	RCL1	100	97.319	ENSNGAG00000015327	Rcl1	100	97.319	Nannospalax_galili
ENSPPAG00000037958	RCL1	90	78.042	ENSNBRG00000019854	rcl1	96	74.581	Neolamprologus_brichardi
ENSPPAG00000037958	RCL1	100	96.515	ENSNLEG00000008891	RCL1	100	96.515	Nomascus_leucogenys
ENSPPAG00000037958	RCL1	100	86.863	ENSMEUG00000007653	RCL1	100	86.863	Notamacropus_eugenii
ENSPPAG00000037958	RCL1	100	96.515	ENSOPRG00000010965	RCL1	100	96.515	Ochotona_princeps
ENSPPAG00000037958	RCL1	88	80.120	ENSODEG00000004151	RCL1	96	81.098	Octodon_degus
ENSPPAG00000037958	RCL1	99	78.649	ENSONIG00000003871	rcl1	99	78.649	Oreochromis_niloticus
ENSPPAG00000037958	RCL1	67	87.747	ENSOANG00000013193	-	100	87.747	Ornithorhynchus_anatinus
ENSPPAG00000037958	RCL1	100	98.123	ENSOCUG00000008161	RCL1	100	98.123	Oryctolagus_cuniculus
ENSPPAG00000037958	RCL1	100	76.738	ENSORLG00000010443	rcl1	100	76.738	Oryzias_latipes
ENSPPAG00000037958	RCL1	100	76.738	ENSORLG00020012211	rcl1	100	76.738	Oryzias_latipes_hni
ENSPPAG00000037958	RCL1	100	76.471	ENSORLG00015001122	rcl1	100	76.471	Oryzias_latipes_hsok
ENSPPAG00000037958	RCL1	100	77.807	ENSOMEG00000022976	rcl1	88	77.807	Oryzias_melastigma
ENSPPAG00000037958	RCL1	100	95.710	ENSOGAG00000007480	RCL1	100	95.710	Otolemur_garnettii
ENSPPAG00000037958	RCL1	100	96.515	ENSOARG00000013463	RCL1	100	96.515	Ovis_aries
ENSPPAG00000037958	RCL1	100	94.638	ENSPPRG00000022645	RCL1	100	94.638	Panthera_pardus
ENSPPAG00000037958	RCL1	87	95.706	ENSPTIG00000019031	RCL1	97	94.712	Panthera_tigris_altaica
ENSPPAG00000037958	RCL1	100	99.732	ENSPTRG00000020743	RCL1	100	99.732	Pan_troglodytes
ENSPPAG00000037958	RCL1	100	99.196	ENSPANG00000025151	RCL1	100	99.196	Papio_anubis
ENSPPAG00000037958	RCL1	100	77.807	ENSPKIG00000021022	rcl1	100	77.807	Paramormyrops_kingsleyae
ENSPPAG00000037958	RCL1	88	89.634	ENSPSIG00000012302	RCL1	100	89.634	Pelodiscus_sinensis
ENSPPAG00000037958	RCL1	100	76.471	ENSPMGG00000024007	rcl1	100	76.471	Periophthalmus_magnuspinnatus
ENSPPAG00000037958	RCL1	100	97.051	ENSPEMG00000023275	Rcl1	100	97.051	Peromyscus_maniculatus_bairdii
ENSPPAG00000037958	RCL1	97	30.959	ENSPMAG00000009110	rtca	96	30.959	Petromyzon_marinus
ENSPPAG00000037958	RCL1	100	93.834	ENSPCIG00000000188	RCL1	100	93.834	Phascolarctos_cinereus
ENSPPAG00000037958	RCL1	99	78.919	ENSPFOG00000019682	rcl1	99	78.919	Poecilia_formosa
ENSPPAG00000037958	RCL1	99	78.919	ENSPLAG00000022354	rcl1	99	78.919	Poecilia_latipinna
ENSPPAG00000037958	RCL1	99	78.919	ENSPMEG00000008131	rcl1	99	78.919	Poecilia_mexicana
ENSPPAG00000037958	RCL1	99	78.649	ENSPREG00000008032	rcl1	99	78.649	Poecilia_reticulata
ENSPPAG00000037958	RCL1	100	99.464	ENSPPYG00000019244	RCL1	100	99.464	Pongo_abelii
ENSPPAG00000037958	RCL1	100	85.791	ENSPCAG00000001440	RCL1	100	85.791	Procavia_capensis
ENSPPAG00000037958	RCL1	100	98.123	ENSPCOG00000009611	RCL1	100	98.123	Propithecus_coquereli
ENSPPAG00000037958	RCL1	100	97.051	ENSPVAG00000015752	RCL1	100	97.051	Pteropus_vampyrus
ENSPPAG00000037958	RCL1	99	78.649	ENSPNYG00000012910	rcl1	99	78.649	Pundamilia_nyererei
ENSPPAG00000037958	RCL1	99	78.284	ENSPNAG00000028307	rcl1	92	78.284	Pygocentrus_nattereri
ENSPPAG00000037958	RCL1	100	96.515	ENSRNOG00000015491	Rcl1	100	96.515	Rattus_norvegicus
ENSPPAG00000037958	RCL1	100	99.196	ENSRBIG00000035818	RCL1	100	99.196	Rhinopithecus_bieti
ENSPPAG00000037958	RCL1	100	99.196	ENSRROG00000029781	RCL1	100	99.196	Rhinopithecus_roxellana
ENSPPAG00000037958	RCL1	98	36.216	YOL010W	-	97	36.216	Saccharomyces_cerevisiae
ENSPPAG00000037958	RCL1	100	98.928	ENSSBOG00000026369	RCL1	100	98.928	Saimiri_boliviensis_boliviensis
ENSPPAG00000037958	RCL1	88	92.727	ENSSHAG00000014086	RCL1	100	92.727	Sarcophilus_harrisii
ENSPPAG00000037958	RCL1	100	78.075	ENSSFOG00015023020	rcl1	100	78.075	Scleropages_formosus
ENSPPAG00000037958	RCL1	99	78.919	ENSSMAG00000019751	rcl1	85	78.919	Scophthalmus_maximus
ENSPPAG00000037958	RCL1	100	77.807	ENSSDUG00000006349	rcl1	100	77.807	Seriola_dumerili
ENSPPAG00000037958	RCL1	100	78.075	ENSSLDG00000022076	rcl1	100	78.075	Seriola_lalandi_dorsalis
ENSPPAG00000037958	RCL1	100	95.979	ENSSARG00000009260	RCL1	100	95.979	Sorex_araneus
ENSPPAG00000037958	RCL1	100	88.472	ENSSPUG00000016330	RCL1	100	88.472	Sphenodon_punctatus
ENSPPAG00000037958	RCL1	100	79.947	ENSSPAG00000018038	rcl1	100	79.947	Stegastes_partitus
ENSPPAG00000037958	RCL1	100	97.855	ENSSSCG00000005217	RCL1	83	97.855	Sus_scrofa
ENSPPAG00000037958	RCL1	100	85.333	ENSTGUG00000005138	RCL1	100	85.333	Taeniopygia_guttata
ENSPPAG00000037958	RCL1	99	78.378	ENSTRUG00000010493	rcl1	99	78.378	Takifugu_rubripes
ENSPPAG00000037958	RCL1	99	77.236	ENSTNIG00000013214	rcl1	99	77.236	Tetraodon_nigroviridis
ENSPPAG00000037958	RCL1	100	90.617	ENSTBEG00000016339	RCL1	100	90.617	Tupaia_belangeri
ENSPPAG00000037958	RCL1	100	96.515	ENSTTRG00000016525	RCL1	100	96.515	Tursiops_truncatus
ENSPPAG00000037958	RCL1	100	97.319	ENSUAMG00000005598	RCL1	100	97.319	Ursus_americanus
ENSPPAG00000037958	RCL1	88	96.636	ENSUMAG00000017890	RCL1	97	96.636	Ursus_maritimus
ENSPPAG00000037958	RCL1	88	98.165	ENSVPAG00000009188	RCL1	100	98.165	Vicugna_pacos
ENSPPAG00000037958	RCL1	88	96.646	ENSVVUG00000007304	RCL1	89	96.646	Vulpes_vulpes
ENSPPAG00000037958	RCL1	100	75.134	ENSXETG00000000592	rcl1	100	75.134	Xenopus_tropicalis
ENSPPAG00000037958	RCL1	59	30.455	ENSXCOG00000008002	rtca	63	30.455	Xiphophorus_couchianus
ENSPPAG00000037958	RCL1	99	78.919	ENSXCOG00000004922	rcl1	99	78.919	Xiphophorus_couchianus
ENSPPAG00000037958	RCL1	99	78.919	ENSXMAG00000022366	RCL1	99	78.919	Xiphophorus_maculatus