EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPAG00000038083 (Gene tree)
Gene ID: 100995616
Gene Symbol: RPUSD3
Alias: -
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 6320 bases
Position: chr3:10025320-10031639
Accession: 100995616
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000030157	PseudoU_synth_2	PF00849.22	1.4e-19	1	1
ENSPPAP00000030169	PseudoU_synth_2	PF00849.22	3e-18	1	1
ENSPPAP00000030162	PseudoU_synth_2	PF00849.22	4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000053015	RPUSD3-201	1251	XM_003814245	ENSPPAP00000030157	351 (aa)	XP_003814293	A0A2R9BNZ2
ENSPPAT00000053027	RPUSD3-203	639	-	ENSPPAP00000030169	212 (aa)	-	A0A2R9BKE1
ENSPPAT00000053020	RPUSD3-202	1182	XM_003814246	ENSPPAP00000030162	336 (aa)	XP_003814294	A0A2R9BNZ6

Gene Model

Click here to download ENSPPAG00000038083's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000038083's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000038083	RPUSD3	100	98.006	ENSG00000156990	RPUSD3	100	98.006	Homo_sapiens
ENSPPAG00000038083	RPUSD3	99	80.802	ENSAMEG00000016227	RPUSD3	99	80.802	Ailuropoda_melanoleuca
ENSPPAG00000038083	RPUSD3	94	50.893	ENSACAG00000009836	RPUSD3	93	50.893	Anolis_carolinensis
ENSPPAG00000038083	RPUSD3	99	66.029	ENSANAG00000007127	-	100	66.029	Aotus_nancymaae
ENSPPAG00000038083	RPUSD3	91	90.155	ENSANAG00000019945	-	94	74.800	Aotus_nancymaae
ENSPPAG00000038083	RPUSD3	99	80.861	ENSANAG00000038118	-	98	80.861	Aotus_nancymaae
ENSPPAG00000038083	RPUSD3	95	84.158	ENSBTAG00000007968	RPUSD3	100	80.814	Bos_taurus
ENSPPAG00000038083	RPUSD3	100	80.398	ENSCAFG00000029733	RPUSD3	100	80.398	Canis_familiaris
ENSPPAG00000038083	RPUSD3	100	80.398	ENSCAFG00020008582	RPUSD3	100	80.398	Canis_lupus_dingo
ENSPPAG00000038083	RPUSD3	97	80.882	ENSCHIG00000026027	RPUSD3	99	80.882	Capra_hircus
ENSPPAG00000038083	RPUSD3	95	82.298	ENSTSYG00000009994	RPUSD3	96	82.298	Carlito_syrichta
ENSPPAG00000038083	RPUSD3	75	80.228	ENSCAPG00000017559	RPUSD3	99	80.228	Cavia_aperea
ENSPPAG00000038083	RPUSD3	99	67.529	ENSCPOG00000037956	RPUSD3	92	67.816	Cavia_porcellus
ENSPPAG00000038083	RPUSD3	100	90.566	ENSCCAG00000029530	RPUSD3	100	90.566	Cebus_capucinus
ENSPPAG00000038083	RPUSD3	100	92.925	ENSCATG00000036939	RPUSD3	100	92.925	Cercocebus_atys
ENSPPAG00000038083	RPUSD3	100	91.738	ENSCSAG00000010506	RPUSD3	100	91.738	Chlorocebus_sabaeus
ENSPPAG00000038083	RPUSD3	53	84.821	ENSCHOG00000010151	-	65	84.821	Choloepus_hoffmanni
ENSPPAG00000038083	RPUSD3	73	54.251	ENSCPBG00000008825	RPUSD3	95	52.140	Chrysemys_picta_bellii
ENSPPAG00000038083	RPUSD3	100	93.396	ENSCANG00000040711	RPUSD3	100	93.396	Colobus_angolensis_palliatus
ENSPPAG00000038083	RPUSD3	99	72.334	ENSCGRG00001004923	Rpusd3	96	72.334	Cricetulus_griseus_chok1gshd
ENSPPAG00000038083	RPUSD3	95	73.887	ENSCGRG00000018315	Rpusd3	98	73.887	Cricetulus_griseus_crigri
ENSPPAG00000038083	RPUSD3	99	76.791	ENSDNOG00000039160	RPUSD3	92	76.791	Dasypus_novemcinctus
ENSPPAG00000038083	RPUSD3	97	63.363	ENSDORG00000026827	Rpusd3	92	77.612	Dipodomys_ordii
ENSPPAG00000038083	RPUSD3	99	73.352	ENSETEG00000006538	RPUSD3	99	73.352	Echinops_telfairi
ENSPPAG00000038083	RPUSD3	81	37.356	ENSEBUG00000015605	RPUSD3	67	39.806	Eptatretus_burgeri
ENSPPAG00000038083	RPUSD3	100	81.250	ENSEASG00005014160	RPUSD3	98	81.250	Equus_asinus_asinus
ENSPPAG00000038083	RPUSD3	100	82.102	ENSECAG00000019988	RPUSD3	98	82.102	Equus_caballus
ENSPPAG00000038083	RPUSD3	95	57.817	ENSEEUG00000007353	RPUSD3	96	57.817	Erinaceus_europaeus
ENSPPAG00000038083	RPUSD3	99	81.662	ENSFCAG00000014199	RPUSD3	99	81.662	Felis_catus
ENSPPAG00000038083	RPUSD3	77	49.817	ENSFALG00000012968	RPUSD3	99	47.253	Ficedula_albicollis
ENSPPAG00000038083	RPUSD3	75	83.650	ENSFDAG00000008350	RPUSD3	81	83.650	Fukomys_damarensis
ENSPPAG00000038083	RPUSD3	75	54.753	ENSGAGG00000007493	RPUSD3	82	52.471	Gopherus_agassizii
ENSPPAG00000038083	RPUSD3	100	98.291	ENSGGOG00000013120	RPUSD3	100	98.291	Gorilla_gorilla
ENSPPAG00000038083	RPUSD3	87	78.804	ENSHGLG00000011722	RPUSD3	96	66.400	Heterocephalus_glaber_female
ENSPPAG00000038083	RPUSD3	87	78.804	ENSHGLG00100016038	RPUSD3	96	66.400	Heterocephalus_glaber_male
ENSPPAG00000038083	RPUSD3	100	77.557	ENSSTOG00000002125	RPUSD3	100	77.557	Ictidomys_tridecemlineatus
ENSPPAG00000038083	RPUSD3	97	73.684	ENSJJAG00000012679	Rpusd3	99	72.941	Jaculus_jaculus
ENSPPAG00000038083	RPUSD3	94	83.500	ENSLAFG00000017501	RPUSD3	98	82.143	Loxodonta_africana
ENSPPAG00000038083	RPUSD3	100	91.168	ENSMFAG00000032407	RPUSD3	100	91.168	Macaca_fascicularis
ENSPPAG00000038083	RPUSD3	100	91.071	ENSMMUG00000010628	RPUSD3	100	91.071	Macaca_mulatta
ENSPPAG00000038083	RPUSD3	100	90.883	ENSMNEG00000040308	RPUSD3	100	90.883	Macaca_nemestrina
ENSPPAG00000038083	RPUSD3	100	93.396	ENSMLEG00000033940	RPUSD3	100	93.396	Mandrillus_leucophaeus
ENSPPAG00000038083	RPUSD3	94	75.821	ENSMAUG00000015473	Rpusd3	97	75.821	Mesocricetus_auratus
ENSPPAG00000038083	RPUSD3	97	83.981	ENSMICG00000002315	RPUSD3	99	82.111	Microcebus_murinus
ENSPPAG00000038083	RPUSD3	97	72.434	ENSMOCG00000022613	Rpusd3	99	72.434	Microtus_ochrogaster
ENSPPAG00000038083	RPUSD3	99	54.958	ENSMODG00000005210	RPUSD3	89	54.958	Monodelphis_domestica
ENSPPAG00000038083	RPUSD3	98	72.965	MGP_CAROLIEiJ_G0028725	Rpusd3	100	72.965	Mus_caroli
ENSPPAG00000038083	RPUSD3	98	73.256	ENSMUSG00000051169	Rpusd3	100	73.256	Mus_musculus
ENSPPAG00000038083	RPUSD3	98	73.256	MGP_PahariEiJ_G0022476	Rpusd3	100	73.256	Mus_pahari
ENSPPAG00000038083	RPUSD3	98	72.965	MGP_SPRETEiJ_G0029753	Rpusd3	100	72.965	Mus_spretus
ENSPPAG00000038083	RPUSD3	100	78.977	ENSMPUG00000017132	RPUSD3	100	78.977	Mustela_putorius_furo
ENSPPAG00000038083	RPUSD3	98	83.815	ENSMLUG00000006135	RPUSD3	99	83.815	Myotis_lucifugus
ENSPPAG00000038083	RPUSD3	97	73.900	ENSNGAG00000023704	Rpusd3	99	73.900	Nannospalax_galili
ENSPPAG00000038083	RPUSD3	100	96.226	ENSNLEG00000004214	RPUSD3	100	96.226	Nomascus_leucogenys
ENSPPAG00000038083	RPUSD3	74	66.667	ENSMEUG00000013098	-	100	66.667	Notamacropus_eugenii
ENSPPAG00000038083	RPUSD3	97	63.529	ENSOPRG00000002300	RPUSD3	96	63.529	Ochotona_princeps
ENSPPAG00000038083	RPUSD3	75	78.030	ENSODEG00000018137	RPUSD3	91	78.030	Octodon_degus
ENSPPAG00000038083	RPUSD3	84	53.371	ENSOANG00000012081	-	99	51.579	Ornithorhynchus_anatinus
ENSPPAG00000038083	RPUSD3	89	79.474	ENSOCUG00000027885	RPUSD3	100	67.714	Oryctolagus_cuniculus
ENSPPAG00000038083	RPUSD3	95	84.236	ENSOGAG00000012592	RPUSD3	99	85.209	Otolemur_garnettii
ENSPPAG00000038083	RPUSD3	99	81.197	ENSOARG00000005928	RPUSD3	99	81.197	Ovis_aries
ENSPPAG00000038083	RPUSD3	99	81.662	ENSPPRG00000024433	RPUSD3	99	81.662	Panthera_pardus
ENSPPAG00000038083	RPUSD3	99	82.335	ENSPTIG00000006828	RPUSD3	98	83.631	Panthera_tigris_altaica
ENSPPAG00000038083	RPUSD3	100	99.715	ENSPTRG00000051760	RPUSD3	100	99.715	Pan_troglodytes
ENSPPAG00000038083	RPUSD3	100	93.396	ENSPANG00000023885	RPUSD3	100	93.396	Papio_anubis
ENSPPAG00000038083	RPUSD3	95	73.824	ENSPEMG00000017245	Rpusd3	99	73.824	Peromyscus_maniculatus_bairdii
ENSPPAG00000038083	RPUSD3	96	59.050	ENSPCIG00000021901	RPUSD3	96	59.050	Phascolarctos_cinereus
ENSPPAG00000038083	RPUSD3	100	96.011	ENSPPYG00000013676	RPUSD3	100	96.011	Pongo_abelii
ENSPPAG00000038083	RPUSD3	95	58.911	ENSPCAG00000013731	-	100	60.208	Procavia_capensis
ENSPPAG00000038083	RPUSD3	99	85.960	ENSPCOG00000018314	RPUSD3	99	85.960	Propithecus_coquereli
ENSPPAG00000038083	RPUSD3	99	80.229	ENSPVAG00000011107	RPUSD3	99	80.229	Pteropus_vampyrus
ENSPPAG00000038083	RPUSD3	98	71.125	ENSRNOG00000009084	Rpusd3	100	71.125	Rattus_norvegicus
ENSPPAG00000038083	RPUSD3	100	94.340	ENSRBIG00000041230	RPUSD3	100	94.340	Rhinopithecus_bieti
ENSPPAG00000038083	RPUSD3	100	94.340	ENSRROG00000043328	RPUSD3	100	94.340	Rhinopithecus_roxellana
ENSPPAG00000038083	RPUSD3	100	88.034	ENSSBOG00000036106	RPUSD3	100	88.034	Saimiri_boliviensis_boliviensis
ENSPPAG00000038083	RPUSD3	95	57.921	ENSSHAG00000015536	RPUSD3	99	59.740	Sarcophilus_harrisii
ENSPPAG00000038083	RPUSD3	100	80.114	ENSSSCG00000011555	RPUSD3	100	80.114	Sus_scrofa
ENSPPAG00000038083	RPUSD3	73	47.742	ENSTGUG00000008744	RPUSD3	93	50.691	Taeniopygia_guttata
ENSPPAG00000038083	RPUSD3	95	80.693	ENSTBEG00000000176	RPUSD3	100	77.855	Tupaia_belangeri
ENSPPAG00000038083	RPUSD3	100	79.545	ENSTTRG00000007544	RPUSD3	100	79.545	Tursiops_truncatus
ENSPPAG00000038083	RPUSD3	96	82.927	ENSUAMG00000011354	RPUSD3	97	82.637	Ursus_americanus
ENSPPAG00000038083	RPUSD3	99	80.516	ENSUMAG00000018830	RPUSD3	99	80.516	Ursus_maritimus
ENSPPAG00000038083	RPUSD3	99	82.547	ENSVVUG00000023735	RPUSD3	98	82.493	Vulpes_vulpes
ENSPPAG00000038083	RPUSD3	81	50.289	ENSXETG00000023546	rpusd3	99	49.822	Xenopus_tropicalis