EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPPAG00000038438 (Gene tree)
Gene ID: 100967318
Gene Symbol: PRDM4
Alias: -
Full Name: PR/SET domain 4
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 27861 bases
Position: chr12:108699444-108727304
Accession: 100967318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000031025	zf-C2H2	PF00096.26	6.7e-19	1	2
ENSPPAP00000031025	zf-C2H2	PF00096.26	6.7e-19	2	2
ENSPPAP00000031025	zf-met	PF12874.7	5.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000053889	PRDM4-201	4005	XM_003832537	ENSPPAP00000031025	801 (aa)	XP_003832585	A0A2R9BMW8

Gene Model

Click here to download ENSPPAG00000038438's gene model file

Pathways

Pathway ID	Pathway Name	Source
pps04722	Neurotrophin signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000038438's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000038438	PRDM4	100	99.750	ENSG00000110851	PRDM4	100	100.000	Homo_sapiens
ENSPPAG00000038438	PRDM4	99	97.372	ENSAMEG00000016174	PRDM4	99	97.372	Ailuropoda_melanoleuca
ENSPPAG00000038438	PRDM4	99	87.594	ENSAPLG00000009846	PRDM4	99	86.967	Anas_platyrhynchos
ENSPPAG00000038438	PRDM4	100	99.126	ENSANAG00000024800	PRDM4	100	99.126	Aotus_nancymaae
ENSPPAG00000038438	PRDM4	100	97.253	ENSBTAG00000012999	PRDM4	100	97.253	Bos_taurus
ENSPPAG00000038438	PRDM4	100	98.627	ENSCJAG00000015261	PRDM4	100	98.627	Callithrix_jacchus
ENSPPAG00000038438	PRDM4	100	97.378	ENSCAFG00000001788	PRDM4	100	97.378	Canis_familiaris
ENSPPAG00000038438	PRDM4	100	97.378	ENSCAFG00020004916	PRDM4	100	97.378	Canis_lupus_dingo
ENSPPAG00000038438	PRDM4	100	96.879	ENSCHIG00000019409	PRDM4	100	96.879	Capra_hircus
ENSPPAG00000038438	PRDM4	100	97.628	ENSTSYG00000009248	PRDM4	100	97.628	Carlito_syrichta
ENSPPAG00000038438	PRDM4	99	90.738	ENSCAPG00000013937	PRDM4	99	90.613	Cavia_aperea
ENSPPAG00000038438	PRDM4	99	90.186	ENSCPOG00000022385	PRDM4	100	90.062	Cavia_porcellus
ENSPPAG00000038438	PRDM4	100	99.251	ENSCCAG00000036033	PRDM4	100	99.251	Cebus_capucinus
ENSPPAG00000038438	PRDM4	100	99.376	ENSCATG00000044797	PRDM4	100	99.376	Cercocebus_atys
ENSPPAG00000038438	PRDM4	99	92.786	ENSCLAG00000007545	PRDM4	100	93.159	Chinchilla_lanigera
ENSPPAG00000038438	PRDM4	100	99.625	ENSCSAG00000002896	PRDM4	100	99.625	Chlorocebus_sabaeus
ENSPPAG00000038438	PRDM4	76	98.182	ENSCHOG00000001744	PRDM4	86	98.182	Choloepus_hoffmanni
ENSPPAG00000038438	PRDM4	99	88.331	ENSCPBG00000023187	PRDM4	100	87.955	Chrysemys_picta_bellii
ENSPPAG00000038438	PRDM4	100	99.501	ENSCANG00000021804	PRDM4	100	99.501	Colobus_angolensis_palliatus
ENSPPAG00000038438	PRDM4	99	93.408	ENSCGRG00001015102	-	100	93.035	Cricetulus_griseus_chok1gshd
ENSPPAG00000038438	PRDM4	96	93.419	ENSCGRG00000004044	-	100	93.032	Cricetulus_griseus_crigri
ENSPPAG00000038438	PRDM4	100	96.754	ENSDNOG00000032478	PRDM4	100	96.754	Dasypus_novemcinctus
ENSPPAG00000038438	PRDM4	99	82.183	ENSDORG00000015081	-	100	81.932	Dipodomys_ordii
ENSPPAG00000038438	PRDM4	93	45.798	ENSEBUG00000003775	prdm4	99	46.122	Eptatretus_burgeri
ENSPPAG00000038438	PRDM4	100	97.378	ENSECAG00000015423	PRDM4	100	97.378	Equus_caballus
ENSPPAG00000038438	PRDM4	94	93.342	ENSEEUG00000006569	PRDM4	99	92.943	Erinaceus_europaeus
ENSPPAG00000038438	PRDM4	99	60.510	ENSELUG00000015265	prdm4	99	60.753	Esox_lucius
ENSPPAG00000038438	PRDM4	100	97.878	ENSFCAG00000022478	PRDM4	100	97.878	Felis_catus
ENSPPAG00000038438	PRDM4	99	87.704	ENSFALG00000013342	PRDM4	100	87.202	Ficedula_albicollis
ENSPPAG00000038438	PRDM4	100	86.924	ENSGALG00000012619	PRDM4	100	86.301	Gallus_gallus
ENSPPAG00000038438	PRDM4	99	87.970	ENSGAGG00000002763	PRDM4	95	87.594	Gopherus_agassizii
ENSPPAG00000038438	PRDM4	99	99.625	ENSGGOG00000001244	PRDM4	99	99.625	Gorilla_gorilla
ENSPPAG00000038438	PRDM4	99	93.852	ENSHGLG00000004590	PRDM4	98	93.601	Heterocephalus_glaber_female
ENSPPAG00000038438	PRDM4	99	92.795	ENSHGLG00100007464	PRDM4	100	92.547	Heterocephalus_glaber_male
ENSPPAG00000038438	PRDM4	95	61.399	ENSIPUG00000024162	prdm4	93	61.749	Ictalurus_punctatus
ENSPPAG00000038438	PRDM4	100	96.754	ENSSTOG00000016168	PRDM4	100	96.754	Ictidomys_tridecemlineatus
ENSPPAG00000038438	PRDM4	82	93.280	ENSJJAG00000022448	-	95	93.280	Jaculus_jaculus
ENSPPAG00000038438	PRDM4	99	72.896	ENSLACG00000007452	PRDM4	99	73.144	Latimeria_chalumnae
ENSPPAG00000038438	PRDM4	78	41.953	ENSLOCG00000017092	prdm4	100	52.814	Lepisosteus_oculatus
ENSPPAG00000038438	PRDM4	98	96.701	ENSLAFG00000001483	PRDM4	100	96.701	Loxodonta_africana
ENSPPAG00000038438	PRDM4	100	99.750	ENSMFAG00000041862	PRDM4	100	99.750	Macaca_fascicularis
ENSPPAG00000038438	PRDM4	100	99.750	ENSMMUG00000015550	PRDM4	100	99.750	Macaca_mulatta
ENSPPAG00000038438	PRDM4	100	99.501	ENSMNEG00000032319	PRDM4	100	99.501	Macaca_nemestrina
ENSPPAG00000038438	PRDM4	100	99.625	ENSMLEG00000039607	PRDM4	100	99.625	Mandrillus_leucophaeus
ENSPPAG00000038438	PRDM4	99	79.500	ENSMGAG00000012815	PRDM4	100	78.875	Meleagris_gallopavo
ENSPPAG00000038438	PRDM4	100	96.629	ENSMICG00000007807	PRDM4	100	96.629	Microcebus_murinus
ENSPPAG00000038438	PRDM4	99	94.236	ENSMOCG00000000753	Prdm4	99	93.985	Microtus_ochrogaster
ENSPPAG00000038438	PRDM4	99	94.856	ENSMUSG00000035529	Prdm4	100	94.605	Mus_musculus
ENSPPAG00000038438	PRDM4	99	94.228	MGP_PahariEiJ_G0031398	Prdm4	100	94.282	Mus_pahari
ENSPPAG00000038438	PRDM4	99	95.483	MGP_SPRETEiJ_G0016505	Prdm4	100	95.553	Mus_spretus
ENSPPAG00000038438	PRDM4	99	91.272	ENSMPUG00000012238	PRDM4	99	91.272	Mustela_putorius_furo
ENSPPAG00000038438	PRDM4	99	97.118	ENSMLUG00000000767	PRDM4	99	97.118	Myotis_lucifugus
ENSPPAG00000038438	PRDM4	99	95.985	ENSNGAG00000018627	Prdm4	100	95.985	Nannospalax_galili
ENSPPAG00000038438	PRDM4	100	99.625	ENSNLEG00000006748	PRDM4	100	99.625	Nomascus_leucogenys
ENSPPAG00000038438	PRDM4	89	89.202	ENSMEUG00000004495	PRDM4	89	89.202	Notamacropus_eugenii
ENSPPAG00000038438	PRDM4	88	95.238	ENSOPRG00000010192	PRDM4	89	95.238	Ochotona_princeps
ENSPPAG00000038438	PRDM4	99	90.625	ENSODEG00000014750	PRDM4	99	90.500	Octodon_degus
ENSPPAG00000038438	PRDM4	100	91.011	ENSOANG00000005526	PRDM4	100	91.011	Ornithorhynchus_anatinus
ENSPPAG00000038438	PRDM4	93	96.710	ENSOCUG00000012859	PRDM4	96	96.710	Oryctolagus_cuniculus
ENSPPAG00000038438	PRDM4	99	97.867	ENSOGAG00000011945	PRDM4	100	97.867	Otolemur_garnettii
ENSPPAG00000038438	PRDM4	100	96.629	ENSOARG00000017955	PRDM4	100	96.629	Ovis_aries
ENSPPAG00000038438	PRDM4	100	97.878	ENSPPRG00000004144	PRDM4	100	97.878	Panthera_pardus
ENSPPAG00000038438	PRDM4	100	97.878	ENSPTIG00000005847	PRDM4	100	97.878	Panthera_tigris_altaica
ENSPPAG00000038438	PRDM4	100	99.750	ENSPTRG00000005400	PRDM4	100	99.750	Pan_troglodytes
ENSPPAG00000038438	PRDM4	100	99.750	ENSPANG00000022084	PRDM4	100	99.750	Papio_anubis
ENSPPAG00000038438	PRDM4	99	59.810	ENSPKIG00000000875	prdm4	99	60.523	Paramormyrops_kingsleyae
ENSPPAG00000038438	PRDM4	91	81.439	ENSPSIG00000012066	PRDM4	100	81.439	Pelodiscus_sinensis
ENSPPAG00000038438	PRDM4	99	95.859	ENSPEMG00000014598	Prdm4	100	95.859	Peromyscus_maniculatus_bairdii
ENSPPAG00000038438	PRDM4	100	89.179	ENSPCIG00000009471	PRDM4	100	89.179	Phascolarctos_cinereus
ENSPPAG00000038438	PRDM4	100	99.625	ENSPPYG00000004913	PRDM4	100	99.625	Pongo_abelii
ENSPPAG00000038438	PRDM4	83	95.833	ENSPCAG00000009987	PRDM4	83	95.833	Procavia_capensis
ENSPPAG00000038438	PRDM4	100	96.879	ENSPCOG00000021060	PRDM4	100	96.879	Propithecus_coquereli
ENSPPAG00000038438	PRDM4	100	96.883	ENSPVAG00000001596	PRDM4	100	96.883	Pteropus_vampyrus
ENSPPAG00000038438	PRDM4	99	94.236	ENSRNOG00000004962	Prdm4	100	93.985	Rattus_norvegicus
ENSPPAG00000038438	PRDM4	100	99.501	ENSRBIG00000035488	PRDM4	100	99.501	Rhinopithecus_bieti
ENSPPAG00000038438	PRDM4	100	99.625	ENSRROG00000012779	PRDM4	100	99.625	Rhinopithecus_roxellana
ENSPPAG00000038438	PRDM4	100	99.376	ENSSBOG00000000403	PRDM4	100	99.376	Saimiri_boliviensis_boliviensis
ENSPPAG00000038438	PRDM4	99	63.793	ENSSFOG00015023358	prdm4	99	63.793	Scleropages_formosus
ENSPPAG00000038438	PRDM4	100	97.129	ENSSSCG00000000160	PRDM4	100	97.129	Sus_scrofa
ENSPPAG00000038438	PRDM4	99	87.594	ENSTGUG00000010962	-	99	87.093	Taeniopygia_guttata
ENSPPAG00000038438	PRDM4	73	89.761	ENSTBEG00000001732	PRDM4	84	89.761	Tupaia_belangeri
ENSPPAG00000038438	PRDM4	100	96.754	ENSTTRG00000011056	PRDM4	100	96.754	Tursiops_truncatus
ENSPPAG00000038438	PRDM4	100	97.753	ENSUAMG00000022796	PRDM4	100	97.753	Ursus_americanus
ENSPPAG00000038438	PRDM4	100	97.753	ENSUMAG00000017231	PRDM4	100	97.753	Ursus_maritimus
ENSPPAG00000038438	PRDM4	99	97.616	ENSVPAG00000002215	PRDM4	100	97.616	Vicugna_pacos
ENSPPAG00000038438	PRDM4	100	97.378	ENSVVUG00000023397	PRDM4	100	97.378	Vulpes_vulpes