EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPAG00000038442 (Gene tree)
Gene ID: 100974581
Gene Symbol: SRBD1
Alias: -
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 217132 bases
Position: chr2A:46424686-46641817
Accession: 100974581
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000031058	S1	PF00575.23	1.1e-08	1	1
ENSPPAP00000031052	S1	PF00575.23	1.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000053922	SRBD1-202	2949	-	ENSPPAP00000031058	982 (aa)	-	A0A2R9BRK2
ENSPPAT00000053916	SRBD1-201	3618	XM_008976238	ENSPPAP00000031052	995 (aa)	XP_008974486	A0A2R9BX22

Gene Model

Click here to download ENSPPAG00000038442's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000038442's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000038442	SRBD1	100	98.995	ENSG00000068784	SRBD1	100	98.995	Homo_sapiens
ENSPPAG00000038442	SRBD1	100	51.613	ENSAPOG00000005103	si:ch211-117n7.8	83	57.851	Acanthochromis_polyacanthus
ENSPPAG00000038442	SRBD1	100	90.754	ENSAMEG00000005993	SRBD1	100	90.754	Ailuropoda_melanoleuca
ENSPPAG00000038442	SRBD1	94	52.795	ENSACIG00000009875	si:ch211-117n7.8	97	52.410	Amphilophus_citrinellus
ENSPPAG00000038442	SRBD1	98	52.083	ENSAOCG00000024718	si:ch211-117n7.8	84	57.733	Amphiprion_ocellaris
ENSPPAG00000038442	SRBD1	83	57.733	ENSAPEG00000002645	si:ch211-117n7.8	87	57.733	Amphiprion_percula
ENSPPAG00000038442	SRBD1	84	57.210	ENSATEG00000010844	si:ch211-117n7.8	84	57.210	Anabas_testudineus
ENSPPAG00000038442	SRBD1	100	70.090	ENSAPLG00000006313	SRBD1	100	69.661	Anas_platyrhynchos
ENSPPAG00000038442	SRBD1	100	94.271	ENSANAG00000025573	SRBD1	100	94.271	Aotus_nancymaae
ENSPPAG00000038442	SRBD1	99	50.532	ENSACLG00000024219	si:ch211-117n7.8	94	52.508	Astatotilapia_calliptera
ENSPPAG00000038442	SRBD1	86	59.516	ENSAMXG00000004294	SRBD1	93	55.870	Astyanax_mexicanus
ENSPPAG00000038442	SRBD1	100	88.554	ENSBTAG00000007508	SRBD1	97	89.257	Bos_taurus
ENSPPAG00000038442	SRBD1	73	30.106	WBGene00022830	ZK973.1	91	30.504	Caenorhabditis_elegans
ENSPPAG00000038442	SRBD1	100	93.367	ENSCJAG00000000727	SRBD1	100	93.367	Callithrix_jacchus
ENSPPAG00000038442	SRBD1	100	90.271	ENSCAFG00000002554	SRBD1	100	90.271	Canis_familiaris
ENSPPAG00000038442	SRBD1	100	87.349	ENSCAFG00020026284	SRBD1	99	90.360	Canis_lupus_dingo
ENSPPAG00000038442	SRBD1	100	88.755	ENSCHIG00000016535	SRBD1	98	89.458	Capra_hircus
ENSPPAG00000038442	SRBD1	100	91.082	ENSTSYG00000012797	SRBD1	100	91.082	Carlito_syrichta
ENSPPAG00000038442	SRBD1	100	87.651	ENSCPOG00000004773	SRBD1	100	87.149	Cavia_porcellus
ENSPPAG00000038442	SRBD1	100	94.271	ENSCCAG00000025589	SRBD1	100	94.271	Cebus_capucinus
ENSPPAG00000038442	SRBD1	100	96.985	ENSCATG00000039530	SRBD1	100	96.985	Cercocebus_atys
ENSPPAG00000038442	SRBD1	100	88.878	ENSCLAG00000008623	SRBD1	100	88.377	Chinchilla_lanigera
ENSPPAG00000038442	SRBD1	100	97.085	ENSCSAG00000013350	SRBD1	100	97.085	Chlorocebus_sabaeus
ENSPPAG00000038442	SRBD1	93	76.336	ENSCHOG00000003805	SRBD1	93	76.336	Choloepus_hoffmanni
ENSPPAG00000038442	SRBD1	100	73.500	ENSCPBG00000005677	SRBD1	100	72.846	Chrysemys_picta_bellii
ENSPPAG00000038442	SRBD1	79	42.293	ENSCING00000005950	-	99	42.293	Ciona_intestinalis
ENSPPAG00000038442	SRBD1	79	42.821	ENSCSAVG00000000861	-	99	42.695	Ciona_savignyi
ENSPPAG00000038442	SRBD1	99	96.475	ENSCANG00000016307	SRBD1	99	96.475	Colobus_angolensis_palliatus
ENSPPAG00000038442	SRBD1	100	84.770	ENSCGRG00001000513	Srbd1	100	84.770	Cricetulus_griseus_chok1gshd
ENSPPAG00000038442	SRBD1	100	84.770	ENSCGRG00000002283	Srbd1	100	84.770	Cricetulus_griseus_crigri
ENSPPAG00000038442	SRBD1	97	51.310	ENSCSEG00000000856	si:ch211-117n7.8	84	56.659	Cynoglossus_semilaevis
ENSPPAG00000038442	SRBD1	83	56.132	ENSCVAG00000020212	si:ch211-117n7.8	89	56.132	Cyprinodon_variegatus
ENSPPAG00000038442	SRBD1	100	89.990	ENSDNOG00000018686	SRBD1	100	89.990	Dasypus_novemcinctus
ENSPPAG00000038442	SRBD1	100	86.633	ENSDORG00000010468	Srbd1	100	86.633	Dipodomys_ordii
ENSPPAG00000038442	SRBD1	94	34.144	FBgn0051156	CG31156	79	36.555	Drosophila_melanogaster
ENSPPAG00000038442	SRBD1	89	82.321	ENSETEG00000000739	SRBD1	91	82.321	Echinops_telfairi
ENSPPAG00000038442	SRBD1	73	48.707	ENSEBUG00000008902	si:ch211-117n7.8	96	48.707	Eptatretus_burgeri
ENSPPAG00000038442	SRBD1	100	88.554	ENSEASG00005003132	SRBD1	97	94.268	Equus_asinus_asinus
ENSPPAG00000038442	SRBD1	100	91.667	ENSECAG00000013865	SRBD1	98	91.667	Equus_caballus
ENSPPAG00000038442	SRBD1	97	54.582	ENSELUG00000012592	si:ch211-117n7.8	80	59.501	Esox_lucius
ENSPPAG00000038442	SRBD1	100	91.365	ENSFCAG00000005101	SRBD1	100	91.365	Felis_catus
ENSPPAG00000038442	SRBD1	100	67.723	ENSFALG00000012966	SRBD1	100	67.700	Ficedula_albicollis
ENSPPAG00000038442	SRBD1	99	86.280	ENSFDAG00000016670	SRBD1	98	87.318	Fukomys_damarensis
ENSPPAG00000038442	SRBD1	95	52.941	ENSFHEG00000019480	si:ch211-117n7.8	82	57.547	Fundulus_heteroclitus
ENSPPAG00000038442	SRBD1	50	52.027	ENSGMOG00000018010	-	100	52.027	Gadus_morhua
ENSPPAG00000038442	SRBD1	100	69.960	ENSGALG00000009990	SRBD1	100	68.856	Gallus_gallus
ENSPPAG00000038442	SRBD1	98	50.649	ENSGAFG00000019664	si:ch211-117n7.8	97	50.959	Gambusia_affinis
ENSPPAG00000038442	SRBD1	62	60.320	ENSGACG00000010794	si:ch211-117n7.8	100	60.480	Gasterosteus_aculeatus
ENSPPAG00000038442	SRBD1	83	81.325	ENSGAGG00000006166	SRBD1	99	81.325	Gopherus_agassizii
ENSPPAG00000038442	SRBD1	97	99.174	ENSGGOG00000005910	SRBD1	100	99.174	Gorilla_gorilla
ENSPPAG00000038442	SRBD1	90	48.144	ENSHBUG00000013207	si:ch211-117n7.8	86	50.542	Haplochromis_burtoni
ENSPPAG00000038442	SRBD1	99	88.419	ENSHGLG00000018153	-	99	88.419	Heterocephalus_glaber_female
ENSPPAG00000038442	SRBD1	99	88.218	ENSHGLG00100015183	-	99	88.218	Heterocephalus_glaber_male
ENSPPAG00000038442	SRBD1	85	60.798	ENSIPUG00000009661	srbd1	95	55.773	Ictalurus_punctatus
ENSPPAG00000038442	SRBD1	100	90.653	ENSSTOG00000005898	SRBD1	100	90.653	Ictidomys_tridecemlineatus
ENSPPAG00000038442	SRBD1	100	80.742	ENSJJAG00000022244	Srbd1	100	80.742	Jaculus_jaculus
ENSPPAG00000038442	SRBD1	98	51.397	ENSKMAG00000003473	si:ch211-117n7.8	83	56.604	Kryptolebias_marmoratus
ENSPPAG00000038442	SRBD1	98	51.734	ENSLBEG00000027518	si:ch211-117n7.8	83	56.773	Labrus_bergylta
ENSPPAG00000038442	SRBD1	85	70.804	ENSLACG00000009790	SRBD1	99	71.257	Latimeria_chalumnae
ENSPPAG00000038442	SRBD1	100	57.483	ENSLOCG00000016360	si:ch211-117n7.8	99	56.488	Lepisosteus_oculatus
ENSPPAG00000038442	SRBD1	100	97.286	ENSMFAG00000042026	SRBD1	100	97.286	Macaca_fascicularis
ENSPPAG00000038442	SRBD1	100	96.985	ENSMMUG00000003490	SRBD1	100	96.985	Macaca_mulatta
ENSPPAG00000038442	SRBD1	100	94.774	ENSMNEG00000034701	SRBD1	100	94.774	Macaca_nemestrina
ENSPPAG00000038442	SRBD1	100	96.884	ENSMLEG00000000745	SRBD1	100	96.884	Mandrillus_leucophaeus
ENSPPAG00000038442	SRBD1	82	56.250	ENSMAMG00000021921	si:ch211-117n7.8	84	56.169	Mastacembelus_armatus
ENSPPAG00000038442	SRBD1	99	50.532	ENSMZEG00005027369	si:ch211-117n7.8	94	52.508	Maylandia_zebra
ENSPPAG00000038442	SRBD1	80	74.937	ENSMGAG00000010273	SRBD1	100	74.937	Meleagris_gallopavo
ENSPPAG00000038442	SRBD1	79	86.224	ENSMAUG00000013916	Srbd1	99	83.768	Mesocricetus_auratus
ENSPPAG00000038442	SRBD1	100	92.369	ENSMICG00000007835	SRBD1	100	92.369	Microcebus_murinus
ENSPPAG00000038442	SRBD1	100	83.936	ENSMOCG00000018716	Srbd1	100	83.936	Microtus_ochrogaster
ENSPPAG00000038442	SRBD1	84	55.817	ENSMMOG00000007507	si:ch211-117n7.8	87	55.817	Mola_mola
ENSPPAG00000038442	SRBD1	99	50.290	ENSMALG00000001562	si:ch211-117n7.8	86	55.227	Monopterus_albus
ENSPPAG00000038442	SRBD1	100	82.111	MGP_CAROLIEiJ_G0021934	Srbd1	99	84.026	Mus_caroli
ENSPPAG00000038442	SRBD1	100	82.312	ENSMUSG00000024135	Srbd1	100	82.312	Mus_musculus
ENSPPAG00000038442	SRBD1	100	81.407	MGP_PahariEiJ_G0020924	Srbd1	100	81.407	Mus_pahari
ENSPPAG00000038442	SRBD1	100	82.412	MGP_SPRETEiJ_G0022850	Srbd1	100	82.412	Mus_spretus
ENSPPAG00000038442	SRBD1	100	87.450	ENSMLUG00000007039	SRBD1	100	87.450	Myotis_lucifugus
ENSPPAG00000038442	SRBD1	100	83.089	ENSNGAG00000011893	Srbd1	100	82.698	Nannospalax_galili
ENSPPAG00000038442	SRBD1	98	50.100	ENSNBRG00000012873	si:ch211-117n7.8	85	55.872	Neolamprologus_brichardi
ENSPPAG00000038442	SRBD1	100	98.492	ENSNLEG00000016877	SRBD1	100	98.492	Nomascus_leucogenys
ENSPPAG00000038442	SRBD1	100	85.025	ENSODEG00000012095	SRBD1	100	84.623	Octodon_degus
ENSPPAG00000038442	SRBD1	99	50.914	ENSONIG00000000945	si:ch211-117n7.8	100	58.103	Oreochromis_niloticus
ENSPPAG00000038442	SRBD1	100	91.365	ENSOCUG00000015385	SRBD1	100	91.365	Oryctolagus_cuniculus
ENSPPAG00000038442	SRBD1	85	53.502	ENSORLG00000004427	si:ch211-117n7.8	81	54.064	Oryzias_latipes
ENSPPAG00000038442	SRBD1	99	50.286	ENSORLG00020012792	si:ch211-117n7.8	82	57.176	Oryzias_latipes_hni
ENSPPAG00000038442	SRBD1	86	56.014	ENSORLG00015018598	si:ch211-117n7.8	82	56.773	Oryzias_latipes_hsok
ENSPPAG00000038442	SRBD1	98	49.461	ENSOMEG00000012229	si:ch211-117n7.8	82	55.976	Oryzias_melastigma
ENSPPAG00000038442	SRBD1	100	84.739	ENSOGAG00000001076	SRBD1	100	84.739	Otolemur_garnettii
ENSPPAG00000038442	SRBD1	100	84.190	ENSOARG00000005958	SRBD1	100	84.869	Ovis_aries
ENSPPAG00000038442	SRBD1	100	91.357	ENSPPRG00000003449	SRBD1	100	91.357	Panthera_pardus
ENSPPAG00000038442	SRBD1	100	91.457	ENSPTIG00000012495	SRBD1	100	91.457	Panthera_tigris_altaica
ENSPPAG00000038442	SRBD1	100	99.799	ENSPTRG00000011889	SRBD1	100	99.799	Pan_troglodytes
ENSPPAG00000038442	SRBD1	100	96.884	ENSPANG00000008063	SRBD1	100	96.884	Papio_anubis
ENSPPAG00000038442	SRBD1	96	54.640	ENSPKIG00000021973	si:ch211-117n7.8	97	54.357	Paramormyrops_kingsleyae
ENSPPAG00000038442	SRBD1	100	72.545	ENSPSIG00000008992	SRBD1	100	72.627	Pelodiscus_sinensis
ENSPPAG00000038442	SRBD1	89	53.122	ENSPMGG00000013348	si:ch211-117n7.8	98	50.200	Periophthalmus_magnuspinnatus
ENSPPAG00000038442	SRBD1	100	82.630	ENSPEMG00000020684	Srbd1	100	82.630	Peromyscus_maniculatus_bairdii
ENSPPAG00000038442	SRBD1	98	51.142	ENSPFOG00000010650	si:ch211-117n7.8	83	56.389	Poecilia_formosa
ENSPPAG00000038442	SRBD1	98	51.539	ENSPLAG00000002141	si:ch211-117n7.8	83	57.075	Poecilia_latipinna
ENSPPAG00000038442	SRBD1	98	51.241	ENSPMEG00000018537	si:ch211-117n7.8	83	56.958	Poecilia_mexicana
ENSPPAG00000038442	SRBD1	97	51.457	ENSPREG00000003258	si:ch211-117n7.8	86	56.792	Poecilia_reticulata
ENSPPAG00000038442	SRBD1	100	90.332	ENSPPYG00000012444	SRBD1	99	90.332	Pongo_abelii
ENSPPAG00000038442	SRBD1	82	81.963	ENSPCAG00000005629	SRBD1	85	81.963	Procavia_capensis
ENSPPAG00000038442	SRBD1	100	79.980	ENSPCOG00000017669	SRBD1	100	79.980	Propithecus_coquereli
ENSPPAG00000038442	SRBD1	100	80.905	ENSPVAG00000001782	SRBD1	100	80.905	Pteropus_vampyrus
ENSPPAG00000038442	SRBD1	90	52.009	ENSPNYG00000000508	si:ch211-117n7.8	86	54.654	Pundamilia_nyererei
ENSPPAG00000038442	SRBD1	96	57.055	ENSPNAG00000013492	SRBD1	95	55.873	Pygocentrus_nattereri
ENSPPAG00000038442	SRBD1	100	81.225	ENSRNOG00000014720	Srbd1	99	81.928	Rattus_norvegicus
ENSPPAG00000038442	SRBD1	99	96.677	ENSRBIG00000033486	SRBD1	99	96.677	Rhinopithecus_bieti
ENSPPAG00000038442	SRBD1	99	96.677	ENSRROG00000041599	SRBD1	99	96.677	Rhinopithecus_roxellana
ENSPPAG00000038442	SRBD1	100	94.372	ENSSBOG00000024982	SRBD1	100	94.372	Saimiri_boliviensis_boliviensis
ENSPPAG00000038442	SRBD1	87	58.087	ENSSFOG00015001128	si:ch211-117n7.8	90	59.763	Scleropages_formosus
ENSPPAG00000038442	SRBD1	98	51.280	ENSSMAG00000018256	si:ch211-117n7.8	82	57.109	Scophthalmus_maximus
ENSPPAG00000038442	SRBD1	85	56.387	ENSSLDG00000023189	si:ch211-117n7.8	83	56.958	Seriola_lalandi_dorsalis
ENSPPAG00000038442	SRBD1	100	78.492	ENSSARG00000009740	SRBD1	100	78.492	Sorex_araneus
ENSPPAG00000038442	SRBD1	85	77.660	ENSSPUG00000010475	SRBD1	92	78.476	Sphenodon_punctatus
ENSPPAG00000038442	SRBD1	84	55.304	ENSSPAG00000008092	-	95	51.141	Stegastes_partitus
ENSPPAG00000038442	SRBD1	100	89.759	ENSSSCG00000008445	SRBD1	98	90.361	Sus_scrofa
ENSPPAG00000038442	SRBD1	83	76.867	ENSTGUG00000003878	SRBD1	100	76.867	Taeniopygia_guttata
ENSPPAG00000038442	SRBD1	99	50.772	ENSTRUG00000007080	si:ch211-117n7.8	93	56.674	Takifugu_rubripes
ENSPPAG00000038442	SRBD1	99	50.245	ENSTNIG00000007464	si:ch211-117n7.8	99	50.000	Tetraodon_nigroviridis
ENSPPAG00000038442	SRBD1	84	98.913	ENSTBEG00000004556	SRBD1	82	98.936	Tupaia_belangeri
ENSPPAG00000038442	SRBD1	94	91.705	ENSTTRG00000011871	SRBD1	94	91.705	Tursiops_truncatus
ENSPPAG00000038442	SRBD1	100	90.562	ENSUAMG00000008126	SRBD1	97	95.290	Ursus_americanus
ENSPPAG00000038442	SRBD1	100	90.562	ENSUMAG00000012902	SRBD1	98	90.562	Ursus_maritimus
ENSPPAG00000038442	SRBD1	91	91.621	ENSVPAG00000006825	SRBD1	100	91.621	Vicugna_pacos
ENSPPAG00000038442	SRBD1	100	89.759	ENSVVUG00000005389	SRBD1	100	90.361	Vulpes_vulpes
ENSPPAG00000038442	SRBD1	100	52.991	ENSXETG00000002760	srbd1	100	52.924	Xenopus_tropicalis
ENSPPAG00000038442	SRBD1	98	50.645	ENSXMAG00000016861	si:ch211-117n7.8	83	56.486	Xiphophorus_maculatus