EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPAG00000038515 (Gene tree)
Gene ID: 100979166
Gene Symbol: CMSS1
Alias: -
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Plus strand
Length: 36706 bases
Position: chr3:103917730-103954435
Accession: 100979166
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000031147	CMS1	PF14617.6	3.9e-32	1	1
ENSPPAP00000031153	CMS1	PF14617.6	4.2e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000054017	CMSS1-202	837	-	ENSPPAP00000031153	278 (aa)	-	A0A2R9BRV1
ENSPPAT00000054011	CMSS1-201	1101	XM_003821906	ENSPPAP00000031147	272 (aa)	XP_003821954	A0A2R9BXB6

Gene Model

Click here to download ENSPPAG00000038515's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000038515's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000038515	CMSS1	95	98.837	ENSG00000184220	CMSS1	100	100.000	Homo_sapiens
ENSPPAG00000038515	CMSS1	74	64.356	ENSAPOG00000010604	cmss1	96	59.322	Acanthochromis_polyacanthus
ENSPPAG00000038515	CMSS1	95	90.347	ENSAMEG00000004092	CMSS1	100	90.347	Ailuropoda_melanoleuca
ENSPPAG00000038515	CMSS1	74	53.960	ENSACIG00000021854	cmss1	75	53.960	Amphilophus_citrinellus
ENSPPAG00000038515	CMSS1	74	64.356	ENSAOCG00000013361	cmss1	70	64.356	Amphiprion_ocellaris
ENSPPAG00000038515	CMSS1	74	64.356	ENSAPEG00000005829	cmss1	70	64.356	Amphiprion_percula
ENSPPAG00000038515	CMSS1	76	64.563	ENSATEG00000008209	cmss1	97	56.015	Anabas_testudineus
ENSPPAG00000038515	CMSS1	84	69.130	ENSAPLG00000010542	CMSS1	100	69.130	Anas_platyrhynchos
ENSPPAG00000038515	CMSS1	94	64.015	ENSACAG00000011065	CMSS1	97	64.015	Anolis_carolinensis
ENSPPAG00000038515	CMSS1	95	93.822	ENSANAG00000023565	CMSS1	100	93.130	Aotus_nancymaae
ENSPPAG00000038515	CMSS1	74	61.881	ENSACLG00000027294	cmss1	69	61.881	Astatotilapia_calliptera
ENSPPAG00000038515	CMSS1	74	55.500	ENSAMXG00000002046	cmss1	82	51.440	Astyanax_mexicanus
ENSPPAG00000038515	CMSS1	92	87.952	ENSBTAG00000013663	CMSS1	93	87.549	Bos_taurus
ENSPPAG00000038515	CMSS1	95	93.822	ENSCJAG00000000610	CMSS1	100	93.130	Callithrix_jacchus
ENSPPAG00000038515	CMSS1	96	90.769	ENSCAFG00000009230	CMSS1	95	90.421	Canis_familiaris
ENSPPAG00000038515	CMSS1	85	84.483	ENSCAFG00020024156	-	76	80.816	Canis_lupus_dingo
ENSPPAG00000038515	CMSS1	94	91.051	ENSCAFG00020009464	-	94	90.698	Canis_lupus_dingo
ENSPPAG00000038515	CMSS1	94	88.716	ENSCHIG00000013003	CMSS1	93	88.716	Capra_hircus
ENSPPAG00000038515	CMSS1	96	89.231	ENSTSYG00000009266	CMSS1	99	89.922	Carlito_syrichta
ENSPPAG00000038515	CMSS1	82	72.807	ENSCAPG00000013584	CMSS1	100	72.368	Cavia_aperea
ENSPPAG00000038515	CMSS1	95	87.209	ENSCPOG00000014680	CMSS1	92	87.209	Cavia_porcellus
ENSPPAG00000038515	CMSS1	95	94.981	ENSCCAG00000034685	CMSS1	100	94.275	Cebus_capucinus
ENSPPAG00000038515	CMSS1	95	97.674	ENSCATG00000031980	CMSS1	100	96.935	Cercocebus_atys
ENSPPAG00000038515	CMSS1	84	93.886	ENSCLAG00000011241	CMSS1	98	93.886	Chinchilla_lanigera
ENSPPAG00000038515	CMSS1	90	97.959	ENSCSAG00000006024	CMSS1	100	97.959	Chlorocebus_sabaeus
ENSPPAG00000038515	CMSS1	96	67.910	ENSCHOG00000012098	CMSS1	93	69.650	Choloepus_hoffmanni
ENSPPAG00000038515	CMSS1	69	41.327	ENSCING00000014848	-	100	41.711	Ciona_intestinalis
ENSPPAG00000038515	CMSS1	95	96.899	ENSCANG00000031337	CMSS1	99	96.899	Colobus_angolensis_palliatus
ENSPPAG00000038515	CMSS1	99	79.554	ENSCGRG00001014305	Cmss1	97	79.554	Cricetulus_griseus_chok1gshd
ENSPPAG00000038515	CMSS1	93	83.529	ENSCGRG00000006722	Cmss1	99	83.529	Cricetulus_griseus_crigri
ENSPPAG00000038515	CMSS1	74	62.376	ENSCSEG00000004958	cmss1	100	50.168	Cynoglossus_semilaevis
ENSPPAG00000038515	CMSS1	74	60.891	ENSCVAG00000005039	cmss1	98	51.418	Cyprinodon_variegatus
ENSPPAG00000038515	CMSS1	83	52.381	ENSDARG00000112579	cmss1	84	50.407	Danio_rerio
ENSPPAG00000038515	CMSS1	96	85.824	ENSDNOG00000040418	CMSS1	93	85.824	Dasypus_novemcinctus
ENSPPAG00000038515	CMSS1	95	87.597	ENSDORG00000010461	Cmss1	92	87.597	Dipodomys_ordii
ENSPPAG00000038515	CMSS1	84	92.982	ENSEASG00005010966	CMSS1	99	92.694	Equus_asinus_asinus
ENSPPAG00000038515	CMSS1	94	89.883	ENSECAG00000015662	CMSS1	99	92.035	Equus_caballus
ENSPPAG00000038515	CMSS1	84	62.719	ENSEEUG00000007624	-	82	62.719	Erinaceus_europaeus
ENSPPAG00000038515	CMSS1	87	57.917	ENSELUG00000019459	cmss1	80	57.917	Esox_lucius
ENSPPAG00000038515	CMSS1	95	93.023	ENSFCAG00000044577	CMSS1	92	93.023	Felis_catus
ENSPPAG00000038515	CMSS1	87	64.979	ENSFALG00000005816	CMSS1	100	64.979	Ficedula_albicollis
ENSPPAG00000038515	CMSS1	84	91.228	ENSFDAG00000012577	CMSS1	100	91.228	Fukomys_damarensis
ENSPPAG00000038515	CMSS1	83	60.606	ENSFHEG00000012008	cmss1	95	60.606	Fundulus_heteroclitus
ENSPPAG00000038515	CMSS1	74	61.386	ENSGMOG00000016729	cmss1	72	61.386	Gadus_morhua
ENSPPAG00000038515	CMSS1	97	63.296	ENSGALG00000015267	CMSS1	100	63.740	Gallus_gallus
ENSPPAG00000038515	CMSS1	76	63.285	ENSGAFG00000021217	cmss1	77	63.366	Gambusia_affinis
ENSPPAG00000038515	CMSS1	74	56.931	ENSGACG00000002798	cmss1	85	53.165	Gasterosteus_aculeatus
ENSPPAG00000038515	CMSS1	97	64.906	ENSGAGG00000019861	CMSS1	92	70.886	Gopherus_agassizii
ENSPPAG00000038515	CMSS1	95	98.837	ENSGGOG00000014125	CMSS1	100	98.084	Gorilla_gorilla
ENSPPAG00000038515	CMSS1	74	61.881	ENSHBUG00000008431	cmss1	71	61.881	Haplochromis_burtoni
ENSPPAG00000038515	CMSS1	93	85.375	ENSHGLG00000019481	CMSS1	100	85.375	Heterocephalus_glaber_female
ENSPPAG00000038515	CMSS1	94	85.603	ENSHGLG00100010314	CMSS1	100	85.603	Heterocephalus_glaber_male
ENSPPAG00000038515	CMSS1	81	62.667	ENSHCOG00000003222	cmss1	100	52.203	Hippocampus_comes
ENSPPAG00000038515	CMSS1	81	55.204	ENSIPUG00000011591	cmss1	76	55.204	Ictalurus_punctatus
ENSPPAG00000038515	CMSS1	95	91.085	ENSSTOG00000019366	CMSS1	92	91.085	Ictidomys_tridecemlineatus
ENSPPAG00000038515	CMSS1	94	84.436	ENSJJAG00000014894	Cmss1	90	91.584	Jaculus_jaculus
ENSPPAG00000038515	CMSS1	74	53.960	ENSKMAG00000002390	cmss1	81	53.960	Kryptolebias_marmoratus
ENSPPAG00000038515	CMSS1	81	52.917	ENSLBEG00000006298	cmss1	83	58.621	Labrus_bergylta
ENSPPAG00000038515	CMSS1	84	64.348	ENSLACG00000009293	CMSS1	100	64.348	Latimeria_chalumnae
ENSPPAG00000038515	CMSS1	83	57.269	ENSLOCG00000009391	cmss1	100	49.823	Lepisosteus_oculatus
ENSPPAG00000038515	CMSS1	84	90.789	ENSLAFG00000017509	CMSS1	100	90.789	Loxodonta_africana
ENSPPAG00000038515	CMSS1	95	98.062	ENSMFAG00000045006	CMSS1	100	97.318	Macaca_fascicularis
ENSPPAG00000038515	CMSS1	95	97.674	ENSMMUG00000002939	CMSS1	100	96.935	Macaca_mulatta
ENSPPAG00000038515	CMSS1	95	97.674	ENSMNEG00000031315	CMSS1	100	96.935	Macaca_nemestrina
ENSPPAG00000038515	CMSS1	95	97.287	ENSMLEG00000033660	CMSS1	100	96.552	Mandrillus_leucophaeus
ENSPPAG00000038515	CMSS1	74	62.871	ENSMAMG00000017176	cmss1	83	57.676	Mastacembelus_armatus
ENSPPAG00000038515	CMSS1	74	61.881	ENSMZEG00005021886	cmss1	69	61.881	Maylandia_zebra
ENSPPAG00000038515	CMSS1	84	68.421	ENSMGAG00000014360	CMSS1	100	68.421	Meleagris_gallopavo
ENSPPAG00000038515	CMSS1	97	56.089	ENSMAUG00000020609	Cmss1	90	58.594	Mesocricetus_auratus
ENSPPAG00000038515	CMSS1	95	92.636	ENSMICG00000048977	CMSS1	100	91.954	Microcebus_murinus
ENSPPAG00000038515	CMSS1	99	79.554	ENSMOCG00000021937	Cmss1	97	79.554	Microtus_ochrogaster
ENSPPAG00000038515	CMSS1	74	61.881	ENSMMOG00000019794	cmss1	95	57.082	Mola_mola
ENSPPAG00000038515	CMSS1	96	73.563	ENSMODG00000002275	CMSS1	97	73.563	Monodelphis_domestica
ENSPPAG00000038515	CMSS1	89	58.197	ENSMALG00000004250	cmss1	84	57.787	Monopterus_albus
ENSPPAG00000038515	CMSS1	99	78.889	MGP_CAROLIEiJ_G0020824	Cmss1	97	78.889	Mus_caroli
ENSPPAG00000038515	CMSS1	99	79.630	ENSMUSG00000022748	Cmss1	97	79.630	Mus_musculus
ENSPPAG00000038515	CMSS1	100	77.061	MGP_PahariEiJ_G0016524	Cmss1	93	81.467	Mus_pahari
ENSPPAG00000038515	CMSS1	99	79.259	MGP_SPRETEiJ_G0021724	Cmss1	97	79.259	Mus_spretus
ENSPPAG00000038515	CMSS1	95	92.278	ENSMPUG00000011324	CMSS1	100	92.308	Mustela_putorius_furo
ENSPPAG00000038515	CMSS1	95	91.538	ENSMLUG00000001131	CMSS1	99	91.538	Myotis_lucifugus
ENSPPAG00000038515	CMSS1	95	86.047	ENSNGAG00000020316	Cmss1	92	86.047	Nannospalax_galili
ENSPPAG00000038515	CMSS1	74	61.386	ENSNBRG00000003095	cmss1	69	61.386	Neolamprologus_brichardi
ENSPPAG00000038515	CMSS1	95	98.450	ENSNLEG00000034172	CMSS1	100	97.701	Nomascus_leucogenys
ENSPPAG00000038515	CMSS1	84	66.667	ENSMEUG00000014505	CMSS1	100	66.667	Notamacropus_eugenii
ENSPPAG00000038515	CMSS1	99	87.732	ENSOPRG00000002986	CMSS1	97	87.732	Ochotona_princeps
ENSPPAG00000038515	CMSS1	99	71.747	ENSODEG00000001853	-	97	71.747	Octodon_degus
ENSPPAG00000038515	CMSS1	96	68.421	ENSODEG00000009446	-	85	79.817	Octodon_degus
ENSPPAG00000038515	CMSS1	94	81.641	ENSODEG00000003558	-	91	81.641	Octodon_degus
ENSPPAG00000038515	CMSS1	95	85.659	ENSODEG00000005226	-	92	85.659	Octodon_degus
ENSPPAG00000038515	CMSS1	74	60.891	ENSONIG00000006678	cmss1	77	60.891	Oreochromis_niloticus
ENSPPAG00000038515	CMSS1	94	72.692	ENSOANG00000007529	CMSS1	100	74.249	Ornithorhynchus_anatinus
ENSPPAG00000038515	CMSS1	96	91.154	ENSOCUG00000025366	CMSS1	95	90.805	Oryctolagus_cuniculus
ENSPPAG00000038515	CMSS1	84	59.825	ENSORLG00000020340	cmss1	78	59.825	Oryzias_latipes
ENSPPAG00000038515	CMSS1	86	54.894	ENSORLG00020012235	cmss1	99	54.506	Oryzias_latipes_hni
ENSPPAG00000038515	CMSS1	74	56.931	ENSORLG00015015551	cmss1	75	56.931	Oryzias_latipes_hsok
ENSPPAG00000038515	CMSS1	74	64.356	ENSOMEG00000012555	cmss1	82	60.338	Oryzias_melastigma
ENSPPAG00000038515	CMSS1	84	92.105	ENSOGAG00000002045	CMSS1	100	92.105	Otolemur_garnettii
ENSPPAG00000038515	CMSS1	94	88.760	ENSOARG00000017899	CMSS1	89	88.760	Ovis_aries
ENSPPAG00000038515	CMSS1	95	93.023	ENSPPRG00000016767	CMSS1	92	93.023	Panthera_pardus
ENSPPAG00000038515	CMSS1	95	92.636	ENSPTIG00000018274	CMSS1	92	92.636	Panthera_tigris_altaica
ENSPPAG00000038515	CMSS1	100	98.921	ENSPTRG00000015157	CMSS1	100	99.184	Pan_troglodytes
ENSPPAG00000038515	CMSS1	100	93.525	ENSPANG00000019980	CMSS1	100	93.525	Papio_anubis
ENSPPAG00000038515	CMSS1	94	55.351	ENSPKIG00000012609	cmss1	100	55.351	Paramormyrops_kingsleyae
ENSPPAG00000038515	CMSS1	84	72.926	ENSPSIG00000003849	CMSS1	100	72.926	Pelodiscus_sinensis
ENSPPAG00000038515	CMSS1	81	57.522	ENSPMGG00000010286	cmss1	87	61.084	Periophthalmus_magnuspinnatus
ENSPPAG00000038515	CMSS1	95	83.333	ENSPEMG00000016384	Cmss1	92	83.333	Peromyscus_maniculatus_bairdii
ENSPPAG00000038515	CMSS1	75	51.961	ENSPMAG00000001146	cmss1	99	52.475	Petromyzon_marinus
ENSPPAG00000038515	CMSS1	94	73.846	ENSPCIG00000015656	CMSS1	100	73.106	Phascolarctos_cinereus
ENSPPAG00000038515	CMSS1	74	62.871	ENSPFOG00000016849	cmss1	71	62.871	Poecilia_formosa
ENSPPAG00000038515	CMSS1	74	62.376	ENSPLAG00000008323	cmss1	71	62.376	Poecilia_latipinna
ENSPPAG00000038515	CMSS1	74	62.871	ENSPMEG00000021020	cmss1	70	62.871	Poecilia_mexicana
ENSPPAG00000038515	CMSS1	85	58.898	ENSPREG00000007618	cmss1	90	54.307	Poecilia_reticulata
ENSPPAG00000038515	CMSS1	95	97.287	ENSPPYG00000013606	CMSS1	95	97.287	Pongo_abelii
ENSPPAG00000038515	CMSS1	95	92.248	ENSPCOG00000020035	CMSS1	100	91.571	Propithecus_coquereli
ENSPPAG00000038515	CMSS1	95	78.682	ENSPVAG00000017031	CMSS1	92	78.682	Pteropus_vampyrus
ENSPPAG00000038515	CMSS1	65	63.636	ENSPNYG00000013428	cmss1	65	63.636	Pundamilia_nyererei
ENSPPAG00000038515	CMSS1	96	47.423	ENSPNAG00000007912	cmss1	96	48.582	Pygocentrus_nattereri
ENSPPAG00000038515	CMSS1	95	82.239	ENSRNOG00000027888	Cmss1	99	82.239	Rattus_norvegicus
ENSPPAG00000038515	CMSS1	95	96.124	ENSRBIG00000037931	CMSS1	100	95.402	Rhinopithecus_bieti
ENSPPAG00000038515	CMSS1	95	96.124	ENSRROG00000042910	CMSS1	100	95.402	Rhinopithecus_roxellana
ENSPPAG00000038515	CMSS1	95	94.595	ENSSBOG00000030980	CMSS1	100	93.893	Saimiri_boliviensis_boliviensis
ENSPPAG00000038515	CMSS1	91	75.000	ENSSHAG00000009321	CMSS1	99	75.000	Sarcophilus_harrisii
ENSPPAG00000038515	CMSS1	83	60.435	ENSSFOG00015001509	cmss1	95	55.072	Scleropages_formosus
ENSPPAG00000038515	CMSS1	74	63.366	ENSSMAG00000001653	cmss1	69	63.366	Scophthalmus_maximus
ENSPPAG00000038515	CMSS1	83	59.389	ENSSDUG00000007719	cmss1	100	53.287	Seriola_dumerili
ENSPPAG00000038515	CMSS1	76	63.285	ENSSLDG00000012300	cmss1	93	52.000	Seriola_lalandi_dorsalis
ENSPPAG00000038515	CMSS1	99	72.694	ENSSARG00000003584	CMSS1	92	75.581	Sorex_araneus
ENSPPAG00000038515	CMSS1	83	69.912	ENSSPUG00000003865	CMSS1	100	69.912	Sphenodon_punctatus
ENSPPAG00000038515	CMSS1	93	56.107	ENSSPAG00000019182	cmss1	81	55.344	Stegastes_partitus
ENSPPAG00000038515	CMSS1	95	93.023	ENSSSCG00000011970	CMSS1	92	93.023	Sus_scrofa
ENSPPAG00000038515	CMSS1	84	65.939	ENSTGUG00000013635	CMSS1	100	65.939	Taeniopygia_guttata
ENSPPAG00000038515	CMSS1	74	61.386	ENSTRUG00000015265	cmss1	97	50.183	Takifugu_rubripes
ENSPPAG00000038515	CMSS1	74	55.941	ENSTNIG00000002880	cmss1	88	51.029	Tetraodon_nigroviridis
ENSPPAG00000038515	CMSS1	84	67.982	ENSTBEG00000016722	CMSS1	81	67.982	Tupaia_belangeri
ENSPPAG00000038515	CMSS1	95	87.597	ENSTTRG00000001562	CMSS1	92	87.597	Tursiops_truncatus
ENSPPAG00000038515	CMSS1	95	91.860	ENSUAMG00000024209	CMSS1	100	94.170	Ursus_americanus
ENSPPAG00000038515	CMSS1	96	91.154	ENSUMAG00000001983	CMSS1	99	91.473	Ursus_maritimus
ENSPPAG00000038515	CMSS1	84	75.439	ENSVPAG00000000263	CMSS1	82	75.439	Vicugna_pacos
ENSPPAG00000038515	CMSS1	90	90.650	ENSVVUG00000021647	-	100	90.650	Vulpes_vulpes
ENSPPAG00000038515	CMSS1	79	92.593	ENSVVUG00000007776	-	85	92.593	Vulpes_vulpes
ENSPPAG00000038515	CMSS1	96	54.244	ENSXETG00000011858	cmss1	72	64.356	Xenopus_tropicalis
ENSPPAG00000038515	CMSS1	76	62.500	ENSXCOG00000018724	cmss1	69	62.871	Xiphophorus_couchianus
ENSPPAG00000038515	CMSS1	76	62.500	ENSXMAG00000011243	cmss1	76	62.871	Xiphophorus_maculatus