EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000038652 (Gene tree)
Gene ID: 100991544
Gene Symbol: HNRNPU
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 24133 bases
Position: chr1:225817899-225842031
Accession: 100991544
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000031850	SAP	PF02037.27	3.7e-10	1	1
ENSPPAP00000031829	SAP	PF02037.27	4e-10	1	1
ENSPPAP00000031827	SAP	PF02037.27	4.3e-10	1	1
ENSPPAP00000031794	SAP	PF02037.27	4.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000054659	HNRNPU-201	13419	XM_003807988	ENSPPAP00000031794	825 (aa)	XP_003808036	A0A2R9BTM1
ENSPPAT00000054694	HNRNPU-203	2235	-	ENSPPAP00000031829	744 (aa)	-	A0A2R9BTQ3
ENSPPAT00000054692	HNRNPU-202	2394	XM_003807987	ENSPPAP00000031827	797 (aa)	XP_003808035	A0A2R9BQ91
ENSPPAT00000054715	HNRNPU-204	2172	-	ENSPPAP00000031850	723 (aa)	-	A0A2R9BR01

Gene Model

Click here to download ENSPPAG00000038652's gene model file

Pathways

Pathway ID	Pathway Name	Source
pps03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000038652's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000038652	HNRNPU	66	64.286	ENSPPAG00000038140	HNRNPUL1	67	64.286

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000038652	HNRNPU	100	100.000	ENSG00000153187	HNRNPU	100	100.000	Homo_sapiens
ENSPPAG00000038652	HNRNPU	79	77.083	ENSAPOG00000017400	hnrnpub	87	77.083	Acanthochromis_polyacanthus
ENSPPAG00000038652	HNRNPU	99	98.499	ENSAMEG00000009145	HNRNPU	100	94.915	Ailuropoda_melanoleuca
ENSPPAG00000038652	HNRNPU	98	56.552	ENSACIG00000012138	hnrnpub	87	80.952	Amphilophus_citrinellus
ENSPPAG00000038652	HNRNPU	79	75.000	ENSAOCG00000015843	hnrnpub	89	61.538	Amphiprion_ocellaris
ENSPPAG00000038652	HNRNPU	79	75.000	ENSAPEG00000014679	hnrnpub	89	61.538	Amphiprion_percula
ENSPPAG00000038652	HNRNPU	98	56.432	ENSATEG00000016178	hnrnpub	81	60.745	Anabas_testudineus
ENSPPAG00000038652	HNRNPU	80	88.889	ENSACAG00000004511	HNRNPU	79	82.667	Anolis_carolinensis
ENSPPAG00000038652	HNRNPU	100	99.866	ENSANAG00000033895	-	100	99.866	Aotus_nancymaae
ENSPPAG00000038652	HNRNPU	81	83.333	ENSACLG00000008165	hnrnpub	85	83.333	Astatotilapia_calliptera
ENSPPAG00000038652	HNRNPU	100	98.545	ENSBTAG00000007606	HNRNPU	100	98.545	Bos_taurus
ENSPPAG00000038652	HNRNPU	100	99.636	ENSCJAG00000016914	HNRNPU	100	99.636	Callithrix_jacchus
ENSPPAG00000038652	HNRNPU	100	97.643	ENSCAFG00020000918	HNRNPU	100	97.643	Canis_lupus_dingo
ENSPPAG00000038652	HNRNPU	100	97.643	ENSCHIG00000004900	HNRNPU	100	97.643	Capra_hircus
ENSPPAG00000038652	HNRNPU	100	97.939	ENSCPOG00000011887	HNRNPU	100	97.939	Cavia_porcellus
ENSPPAG00000038652	HNRNPU	100	99.723	ENSCCAG00000037859	-	100	99.723	Cebus_capucinus
ENSPPAG00000038652	HNRNPU	100	99.723	ENSCATG00000035273	HNRNPU	100	99.723	Cercocebus_atys
ENSPPAG00000038652	HNRNPU	100	98.182	ENSCLAG00000007100	HNRNPU	100	98.182	Chinchilla_lanigera
ENSPPAG00000038652	HNRNPU	100	98.511	ENSCSAG00000009219	HNRNPU	100	98.511	Chlorocebus_sabaeus
ENSPPAG00000038652	HNRNPU	84	100.000	ENSCHOG00000001387	HNRNPU	79	100.000	Choloepus_hoffmanni
ENSPPAG00000038652	HNRNPU	97	87.896	ENSCPBG00000009415	HNRNPU	88	91.532	Chrysemys_picta_bellii
ENSPPAG00000038652	HNRNPU	100	98.349	ENSCANG00000022780	HNRNPU	100	98.349	Colobus_angolensis_palliatus
ENSPPAG00000038652	HNRNPU	99	98.872	ENSCGRG00001020525	Hnrnpu	100	96.504	Cricetulus_griseus_chok1gshd
ENSPPAG00000038652	HNRNPU	94	54.558	ENSCSEG00000010804	hnrnpub	96	60.924	Cynoglossus_semilaevis
ENSPPAG00000038652	HNRNPU	82	71.429	ENSCVAG00000004280	hnrnpub	85	71.429	Cyprinodon_variegatus
ENSPPAG00000038652	HNRNPU	77	85.714	ENSDARG00000004735	hnrnpub	90	59.459	Danio_rerio
ENSPPAG00000038652	HNRNPU	81	62.319	ENSDARG00000015206	hnrnpua	89	62.319	Danio_rerio
ENSPPAG00000038652	HNRNPU	81	100.000	ENSDNOG00000000215	HNRNPU	88	100.000	Dasypus_novemcinctus
ENSPPAG00000038652	HNRNPU	100	91.656	ENSDORG00000015491	Hnrnpu	100	91.781	Dipodomys_ordii
ENSPPAG00000038652	HNRNPU	96	98.684	ENSETEG00000014565	HNRNPU	100	92.308	Echinops_telfairi
ENSPPAG00000038652	HNRNPU	100	97.146	ENSEASG00005003017	HNRNPU	100	97.146	Equus_asinus_asinus
ENSPPAG00000038652	HNRNPU	100	97.022	ENSECAG00000007955	HNRNPU	100	97.022	Equus_caballus
ENSPPAG00000038652	HNRNPU	98	57.902	ENSELUG00000010733	hnrnpub	82	57.012	Esox_lucius
ENSPPAG00000038652	HNRNPU	99	51.355	ENSELUG00000011966	hnrnpua	67	72.973	Esox_lucius
ENSPPAG00000038652	HNRNPU	100	98.387	ENSFCAG00000002156	HNRNPU	100	98.387	Felis_catus
ENSPPAG00000038652	HNRNPU	99	94.168	ENSFDAG00000006026	HNRNPU	100	98.990	Fukomys_damarensis
ENSPPAG00000038652	HNRNPU	80	69.643	ENSFHEG00000022639	hnrnpub	88	69.643	Fundulus_heteroclitus
ENSPPAG00000038652	HNRNPU	92	57.536	ENSGMOG00000001755	hnrnpub	77	60.891	Gadus_morhua
ENSPPAG00000038652	HNRNPU	96	89.062	ENSGALG00000010671	HNRNPU	100	77.830	Gallus_gallus
ENSPPAG00000038652	HNRNPU	79	78.261	ENSGAFG00000009369	hnrnpub	84	78.261	Gambusia_affinis
ENSPPAG00000038652	HNRNPU	78	74.000	ENSGACG00000004679	hnrnpub	72	77.083	Gasterosteus_aculeatus
ENSPPAG00000038652	HNRNPU	100	99.515	ENSGGOG00000004061	HNRNPU	100	99.515	Gorilla_gorilla
ENSPPAG00000038652	HNRNPU	78	83.333	ENSHBUG00000012290	hnrnpub	85	83.333	Haplochromis_burtoni
ENSPPAG00000038652	HNRNPU	100	97.385	ENSHGLG00000010594	-	100	97.385	Heterocephalus_glaber_female
ENSPPAG00000038652	HNRNPU	90	99.328	ENSHGLG00100015093	HNRNPU	100	99.328	Heterocephalus_glaber_male
ENSPPAG00000038652	HNRNPU	77	83.333	ENSHCOG00000020091	hnrnpub	83	79.545	Hippocampus_comes
ENSPPAG00000038652	HNRNPU	80	78.261	ENSIPUG00000007749	hnrnpu	92	72.549	Ictalurus_punctatus
ENSPPAG00000038652	HNRNPU	99	99.060	ENSJJAG00000011371	Hnrnpu	100	96.614	Jaculus_jaculus
ENSPPAG00000038652	HNRNPU	95	53.194	ENSKMAG00000004532	hnrnpub	88	59.155	Kryptolebias_marmoratus
ENSPPAG00000038652	HNRNPU	82	58.667	ENSLBEG00000022520	hnrnpub	87	61.194	Labrus_bergylta
ENSPPAG00000038652	HNRNPU	99	62.840	ENSLACG00000017463	HNRNPU	99	63.060	Latimeria_chalumnae
ENSPPAG00000038652	HNRNPU	82	80.435	ENSLOCG00000016652	hnrnpua	76	66.355	Lepisosteus_oculatus
ENSPPAG00000038652	HNRNPU	100	97.939	ENSLAFG00000021377	HNRNPU	100	97.939	Loxodonta_africana
ENSPPAG00000038652	HNRNPU	100	99.723	ENSMFAG00000037308	HNRNPU	100	99.723	Macaca_fascicularis
ENSPPAG00000038652	HNRNPU	100	99.374	ENSMMUG00000021098	HNRNPU	100	99.374	Macaca_mulatta
ENSPPAG00000038652	HNRNPU	100	99.723	ENSMNEG00000043645	HNRNPU	100	99.723	Macaca_nemestrina
ENSPPAG00000038652	HNRNPU	79	73.077	ENSMAMG00000007196	hnrnpub	86	73.077	Mastacembelus_armatus
ENSPPAG00000038652	HNRNPU	81	83.333	ENSMZEG00005003185	hnrnpub	85	83.333	Maylandia_zebra
ENSPPAG00000038652	HNRNPU	99	98.872	ENSMAUG00000008842	Hnrnpu	100	96.504	Mesocricetus_auratus
ENSPPAG00000038652	HNRNPU	100	98.909	ENSMICG00000004616	HNRNPU	100	98.909	Microcebus_murinus
ENSPPAG00000038652	HNRNPU	99	98.684	ENSMOCG00000015623	Hnrnpu	100	96.380	Microtus_ochrogaster
ENSPPAG00000038652	HNRNPU	100	91.059	ENSMODG00000006515	HNRNPU	100	92.941	Monodelphis_domestica
ENSPPAG00000038652	HNRNPU	79	70.588	ENSMALG00000018243	hnrnpub	84	61.486	Monopterus_albus
ENSPPAG00000038652	HNRNPU	100	96.758	MGP_CAROLIEiJ_G0014962	Hnrnpu	100	96.758	Mus_caroli
ENSPPAG00000038652	HNRNPU	100	96.883	ENSMUSG00000039630	Hnrnpu	100	96.883	Mus_musculus
ENSPPAG00000038652	HNRNPU	100	96.015	MGP_PahariEiJ_G0028193	Hnrnpu	100	96.015	Mus_pahari
ENSPPAG00000038652	HNRNPU	100	96.883	MGP_SPRETEiJ_G0015761	Hnrnpu	100	96.883	Mus_spretus
ENSPPAG00000038652	HNRNPU	92	96.998	ENSMLUG00000000475	HNRNPU	100	88.366	Myotis_lucifugus
ENSPPAG00000038652	HNRNPU	100	96.879	ENSNGAG00000019075	Hnrnpu	100	96.879	Nannospalax_galili
ENSPPAG00000038652	HNRNPU	81	83.333	ENSNBRG00000017855	hnrnpub	85	83.333	Neolamprologus_brichardi
ENSPPAG00000038652	HNRNPU	99	88.285	ENSMEUG00000000541	HNRNPU	100	90.097	Notamacropus_eugenii
ENSPPAG00000038652	HNRNPU	70	97.087	ENSODEG00000014458	-	100	97.087	Octodon_degus
ENSPPAG00000038652	HNRNPU	81	83.333	ENSONIG00000001260	hnrnpub	88	83.333	Oreochromis_niloticus
ENSPPAG00000038652	HNRNPU	98	98.639	ENSOCUG00000014469	HNRNPU	93	98.639	Oryctolagus_cuniculus
ENSPPAG00000038652	HNRNPU	79	78.261	ENSORLG00000016114	hnrnpub	86	83.333	Oryzias_latipes
ENSPPAG00000038652	HNRNPU	79	78.261	ENSORLG00020005363	hnrnpub	86	83.333	Oryzias_latipes_hni
ENSPPAG00000038652	HNRNPU	79	78.261	ENSORLG00015001190	hnrnpub	86	83.333	Oryzias_latipes_hsok
ENSPPAG00000038652	HNRNPU	79	78.261	ENSOMEG00000014951	hnrnpub	86	83.333	Oryzias_melastigma
ENSPPAG00000038652	HNRNPU	100	97.643	ENSOGAG00000014024	HNRNPU	100	97.643	Otolemur_garnettii
ENSPPAG00000038652	HNRNPU	83	100.000	ENSOARG00000004985	HNRNPU	91	98.658	Ovis_aries
ENSPPAG00000038652	HNRNPU	100	98.545	ENSPPRG00000002662	HNRNPU	100	98.545	Panthera_pardus
ENSPPAG00000038652	HNRNPU	100	100.000	ENSPTRG00000002182	HNRNPU	100	100.000	Pan_troglodytes
ENSPPAG00000038652	HNRNPU	100	99.723	ENSPANG00000011643	HNRNPU	100	99.723	Papio_anubis
ENSPPAG00000038652	HNRNPU	98	61.096	ENSPKIG00000022332	hnrnpub	85	71.698	Paramormyrops_kingsleyae
ENSPPAG00000038652	HNRNPU	78	80.851	ENSPKIG00000006885	hnrnpua	93	59.121	Paramormyrops_kingsleyae
ENSPPAG00000038652	HNRNPU	100	95.227	ENSPCIG00000008657	HNRNPU	100	95.227	Phascolarctos_cinereus
ENSPPAG00000038652	HNRNPU	81	64.062	ENSPFOG00000002908	hnrnpub	89	60.811	Poecilia_formosa
ENSPPAG00000038652	HNRNPU	81	64.062	ENSPLAG00000004160	hnrnpub	89	60.811	Poecilia_latipinna
ENSPPAG00000038652	HNRNPU	100	98.788	ENSPCOG00000018655	-	100	98.788	Propithecus_coquereli
ENSPPAG00000038652	HNRNPU	100	92.804	ENSPCOG00000003883	-	100	93.052	Propithecus_coquereli
ENSPPAG00000038652	HNRNPU	100	98.545	ENSPVAG00000002581	HNRNPU	100	98.545	Pteropus_vampyrus
ENSPPAG00000038652	HNRNPU	81	83.333	ENSPNYG00000021642	hnrnpub	85	83.333	Pundamilia_nyererei
ENSPPAG00000038652	HNRNPU	98	61.351	ENSPNAG00000001055	hnrnpub	86	61.043	Pygocentrus_nattereri
ENSPPAG00000038652	HNRNPU	100	96.504	ENSRNOG00000033790	Hnrnpu	100	96.504	Rattus_norvegicus
ENSPPAG00000038652	HNRNPU	100	98.755	ENSRBIG00000031519	HNRNPU	100	98.755	Rhinopithecus_bieti
ENSPPAG00000038652	HNRNPU	100	98.900	ENSRROG00000041642	HNRNPU	100	98.900	Rhinopithecus_roxellana
ENSPPAG00000038652	HNRNPU	98	61.238	ENSSFOG00015019004	hnrnpu	88	62.228	Scleropages_formosus
ENSPPAG00000038652	HNRNPU	98	61.892	ENSSFOG00015001124	hnrnpub	78	65.839	Scleropages_formosus
ENSPPAG00000038652	HNRNPU	73	70.588	ENSSMAG00000003607	hnrnpub	83	70.588	Scophthalmus_maximus
ENSPPAG00000038652	HNRNPU	79	70.588	ENSSDUG00000005912	hnrnpub	85	70.588	Seriola_dumerili
ENSPPAG00000038652	HNRNPU	79	70.588	ENSSLDG00000004899	hnrnpub	85	70.588	Seriola_lalandi_dorsalis
ENSPPAG00000038652	HNRNPU	97	90.994	ENSSPUG00000011393	HNRNPU	90	90.619	Sphenodon_punctatus
ENSPPAG00000038652	HNRNPU	73	78.261	ENSSPAG00000011853	hnrnpub	86	78.261	Stegastes_partitus
ENSPPAG00000038652	HNRNPU	100	98.788	ENSSSCG00000010877	HNRNPU	100	98.788	Sus_scrofa
ENSPPAG00000038652	HNRNPU	99	55.541	ENSTRUG00000007759	hnrnpub	85	64.706	Takifugu_rubripes
ENSPPAG00000038652	HNRNPU	99	51.638	ENSTNIG00000009725	hnrnpub	90	68.085	Tetraodon_nigroviridis
ENSPPAG00000038652	HNRNPU	71	100.000	ENSTTRG00000005281	HNRNPU	71	100.000	Tursiops_truncatus
ENSPPAG00000038652	HNRNPU	100	98.788	ENSUAMG00000021120	HNRNPU	100	98.788	Ursus_americanus
ENSPPAG00000038652	HNRNPU	98	89.510	ENSUMAG00000012322	HNRNPU	98	96.396	Ursus_maritimus
ENSPPAG00000038652	HNRNPU	86	98.198	ENSVPAG00000010520	HNRNPU	91	98.198	Vicugna_pacos
ENSPPAG00000038652	HNRNPU	100	97.643	ENSVVUG00000026524	HNRNPU	100	97.643	Vulpes_vulpes
ENSPPAG00000038652	HNRNPU	99	75.949	ENSXETG00000011386	hnrnpu	99	69.146	Xenopus_tropicalis
ENSPPAG00000038652	HNRNPU	99	46.282	ENSXMAG00000010356	hnrnpub	97	78.261	Xiphophorus_maculatus