EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000038717 (Gene tree)
Gene ID: 103786918
Gene Symbol: SMARCA2
Alias: -
Full Name: probable global transcription activator SNF2L2
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Plus strand
Length: 176173 bases
Position: chr9:2013237-2189409
Accession: 103786918
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000032610	ResIII	PF04851.15	2e-08	1	1
ENSPPAP00000032607	ResIII	PF04851.15	3e-08	1	1
ENSPPAP00000032593	ResIII	PF04851.15	3e-08	1	1
ENSPPAP00000032586	ResIII	PF04851.15	3.1e-08	1	1
ENSPPAP00000032582	ResIII	PF04851.15	3.2e-08	1	1
ENSPPAP00000032610	BRK	PF07533.16	3.4e-17	1	1
ENSPPAP00000032586	BRK	PF07533.16	3.5e-17	1	1
ENSPPAP00000032607	BRK	PF07533.16	3.5e-17	1	1
ENSPPAP00000032593	BRK	PF07533.16	3.5e-17	1	1
ENSPPAP00000032582	BRK	PF07533.16	3.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000055516	SMARCA2-208	1862	XM_008976978	ENSPPAP00000032647	276 (aa)	XP_008975226	A0A2R9BSK6
ENSPPAT00000054475	SMARCA2-201	1860	XM_008976982	ENSPPAP00000031610	273 (aa)	XP_008975230	A0A2R9BPL0
ENSPPAT00000055479	SMARCA2-206	4221	-	ENSPPAP00000032610	1406 (aa)	-	A0A2R9BVX2
ENSPPAT00000055454	SMARCA2-203	4572	XM_008976976	ENSPPAP00000032586	1523 (aa)	XP_008975224	A0A2R9BT01
ENSPPAT00000055533	SMARCA2-210	1980	XM_008976981	ENSPPAP00000032664	260 (aa)	XP_008975229	A0A2R9C1U4
ENSPPAT00000055487	SMARCA2-207	849	-	ENSPPAP00000032618	282 (aa)	-	A0A2R9BSI5
ENSPPAT00000055451	SMARCA2-202	4701	-	ENSPPAP00000032582	1566 (aa)	-	A0A2R9BSE0
ENSPPAT00000055531	SMARCA2-209	837	-	ENSPPAP00000032662	278 (aa)	-	A0A2R9BSM2
ENSPPAT00000055462	SMARCA2-204	4518	XM_008976977	ENSPPAP00000032593	1505 (aa)	XP_008975225	A0A2R9BSG0
ENSPPAT00000055476	SMARCA2-205	4500	-	ENSPPAP00000032607	1499 (aa)	-	A0A2R9BSG5

Gene Model

Click here to download ENSPPAG00000038717's gene model file

Pathways

Pathway ID	Pathway Name	Source
pps04714	Thermogenesis	KEGG
pps04714	Thermogenesis	KEGG
pps05225	Hepatocellular carcinoma	KEGG
pps05225	Hepatocellular carcinoma	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000038717's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000038717	SMARCA2	96	82.029	ENSPPAG00000043191	SMARCA4	97	75.346

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000038717	SMARCA2	100	95.990	ENSG00000080503	SMARCA2	100	100.000	Homo_sapiens
ENSPPAG00000038717	SMARCA2	100	81.327	ENSAPOG00000002641	SMARCA2	97	79.728	Acanthochromis_polyacanthus
ENSPPAG00000038717	SMARCA2	99	89.317	ENSAMEG00000012325	SMARCA2	99	99.368	Ailuropoda_melanoleuca
ENSPPAG00000038717	SMARCA2	100	79.378	ENSACIG00000015607	SMARCA2	80	85.203	Amphilophus_citrinellus
ENSPPAG00000038717	SMARCA2	100	81.032	ENSAOCG00000009647	-	97	79.357	Amphiprion_ocellaris
ENSPPAG00000038717	SMARCA2	100	81.300	ENSAPEG00000007646	SMARCA2	97	79.484	Amphiprion_percula
ENSPPAG00000038717	SMARCA2	97	86.731	ENSATEG00000006916	SMARCA2	89	87.227	Anabas_testudineus
ENSPPAG00000038717	SMARCA2	98	89.329	ENSAPLG00000013873	SMARCA2	100	83.020	Anas_platyrhynchos
ENSPPAG00000038717	SMARCA2	99	93.412	ENSACAG00000002423	SMARCA2	94	94.712	Anolis_carolinensis
ENSPPAG00000038717	SMARCA2	100	95.671	ENSANAG00000026498	SMARCA2	100	95.671	Aotus_nancymaae
ENSPPAG00000038717	SMARCA2	100	80.937	ENSACLG00000004248	SMARCA2	80	85.692	Astatotilapia_calliptera
ENSPPAG00000038717	SMARCA2	100	79.839	ENSAMXG00000012404	smarca2	100	77.455	Astyanax_mexicanus
ENSPPAG00000038717	SMARCA2	100	93.028	ENSBTAG00000007494	SMARCA2	100	93.167	Bos_taurus
ENSPPAG00000038717	SMARCA2	99	98.356	ENSCJAG00000010710	SMARCA2	99	95.021	Callithrix_jacchus
ENSPPAG00000038717	SMARCA2	100	94.859	ENSCAFG00000002013	SMARCA2	100	93.359	Canis_familiaris
ENSPPAG00000038717	SMARCA2	81	94.906	ENSCAFG00020026802	SMARCA2	98	94.906	Canis_lupus_dingo
ENSPPAG00000038717	SMARCA2	100	94.158	ENSCHIG00000025863	SMARCA2	100	93.466	Capra_hircus
ENSPPAG00000038717	SMARCA2	100	94.596	ENSTSYG00000003858	SMARCA2	100	94.596	Carlito_syrichta
ENSPPAG00000038717	SMARCA2	99	90.633	ENSCAPG00000002890	SMARCA2	99	89.974	Cavia_aperea
ENSPPAG00000038717	SMARCA2	100	93.342	ENSCPOG00000005475	SMARCA2	100	93.367	Cavia_porcellus
ENSPPAG00000038717	SMARCA2	99	97.674	ENSCCAG00000030636	SMARCA2	100	95.674	Cebus_capucinus
ENSPPAG00000038717	SMARCA2	100	96.960	ENSCATG00000031470	SMARCA2	100	96.960	Cercocebus_atys
ENSPPAG00000038717	SMARCA2	99	93.903	ENSCLAG00000014484	SMARCA2	100	93.071	Chinchilla_lanigera
ENSPPAG00000038717	SMARCA2	98	95.296	ENSCSAG00000008650	SMARCA2	99	94.061	Chlorocebus_sabaeus
ENSPPAG00000038717	SMARCA2	87	90.785	ENSCHOG00000004316	SMARCA2	87	90.785	Choloepus_hoffmanni
ENSPPAG00000038717	SMARCA2	100	88.708	ENSCPBG00000025463	SMARCA2	100	88.454	Chrysemys_picta_bellii
ENSPPAG00000038717	SMARCA2	100	96.292	ENSCANG00000039597	SMARCA2	100	96.292	Colobus_angolensis_palliatus
ENSPPAG00000038717	SMARCA2	100	90.880	ENSCGRG00001002323	Smarca2	100	91.142	Cricetulus_griseus_chok1gshd
ENSPPAG00000038717	SMARCA2	99	75.622	ENSCSEG00000019311	SMARCA2	90	82.377	Cynoglossus_semilaevis
ENSPPAG00000038717	SMARCA2	83	85.798	ENSCVAG00000016571	SMARCA2	87	86.540	Cyprinodon_variegatus
ENSPPAG00000038717	SMARCA2	100	79.738	ENSDARG00000008904	smarca2	79	88.212	Danio_rerio
ENSPPAG00000038717	SMARCA2	100	97.729	ENSDNOG00000006402	SMARCA2	95	99.358	Dasypus_novemcinctus
ENSPPAG00000038717	SMARCA2	100	94.044	ENSDORG00000014832	Smarca2	100	93.329	Dipodomys_ordii
ENSPPAG00000038717	SMARCA2	84	60.202	FBgn0000212	brm	86	55.441	Drosophila_melanogaster
ENSPPAG00000038717	SMARCA2	97	71.673	ENSEBUG00000011442	-	88	77.901	Eptatretus_burgeri
ENSPPAG00000038717	SMARCA2	83	67.884	ENSEBUG00000002449	-	95	63.820	Eptatretus_burgeri
ENSPPAG00000038717	SMARCA2	100	93.400	ENSEASG00005010312	SMARCA2	100	93.295	Equus_asinus_asinus
ENSPPAG00000038717	SMARCA2	68	98.611	ENSEEUG00000015540	-	67	98.611	Erinaceus_europaeus
ENSPPAG00000038717	SMARCA2	90	87.008	ENSELUG00000010318	smarca2	87	87.819	Esox_lucius
ENSPPAG00000038717	SMARCA2	100	94.346	ENSFCAG00000001568	SMARCA2	100	92.848	Felis_catus
ENSPPAG00000038717	SMARCA2	97	96.715	ENSFALG00000010416	SMARCA2	93	96.715	Ficedula_albicollis
ENSPPAG00000038717	SMARCA2	99	96.520	ENSFDAG00000010502	SMARCA2	99	94.462	Fukomys_damarensis
ENSPPAG00000038717	SMARCA2	100	81.463	ENSFHEG00000021250	SMARCA2	97	79.971	Fundulus_heteroclitus
ENSPPAG00000038717	SMARCA2	98	77.017	ENSGMOG00000014229	SMARCA2	80	83.386	Gadus_morhua
ENSPPAG00000038717	SMARCA2	90	95.893	ENSGALG00000010164	SMARCA2	93	96.554	Gallus_gallus
ENSPPAG00000038717	SMARCA2	93	76.780	ENSGAFG00000001164	SMARCA2	86	81.459	Gambusia_affinis
ENSPPAG00000038717	SMARCA2	97	84.609	ENSGACG00000014488	SMARCA2	90	85.137	Gasterosteus_aculeatus
ENSPPAG00000038717	SMARCA2	100	88.708	ENSGAGG00000024412	SMARCA2	93	96.635	Gopherus_agassizii
ENSPPAG00000038717	SMARCA2	100	98.361	ENSGGOG00000000513	SMARCA2	100	98.361	Gorilla_gorilla
ENSPPAG00000038717	SMARCA2	100	81.812	ENSHBUG00000006691	SMARCA2	90	86.859	Haplochromis_burtoni
ENSPPAG00000038717	SMARCA2	99	93.972	ENSHGLG00000005215	SMARCA2	99	93.342	Heterocephalus_glaber_female
ENSPPAG00000038717	SMARCA2	100	94.948	ENSHGLG00100010496	SMARCA2	100	93.520	Heterocephalus_glaber_male
ENSPPAG00000038717	SMARCA2	98	75.994	ENSHCOG00000015348	-	88	86.634	Hippocampus_comes
ENSPPAG00000038717	SMARCA2	96	88.317	ENSIPUG00000011060	smarca2	92	88.116	Ictalurus_punctatus
ENSPPAG00000038717	SMARCA2	100	94.309	ENSSTOG00000006812	SMARCA2	100	93.593	Ictidomys_tridecemlineatus
ENSPPAG00000038717	SMARCA2	100	92.978	ENSJJAG00000010867	Smarca2	100	93.189	Jaculus_jaculus
ENSPPAG00000038717	SMARCA2	99	85.569	ENSKMAG00000015844	-	90	85.840	Kryptolebias_marmoratus
ENSPPAG00000038717	SMARCA2	99	88.263	ENSLOCG00000011499	smarca2	92	89.179	Lepisosteus_oculatus
ENSPPAG00000038717	SMARCA2	83	98.798	ENSLAFG00000014061	SMARCA2	93	98.878	Loxodonta_africana
ENSPPAG00000038717	SMARCA2	100	97.514	ENSMFAG00000003814	SMARCA2	100	97.514	Macaca_fascicularis
ENSPPAG00000038717	SMARCA2	100	96.231	ENSMMUG00000015279	SMARCA2	100	96.231	Macaca_mulatta
ENSPPAG00000038717	SMARCA2	100	96.476	ENSMNEG00000041069	SMARCA2	100	96.476	Macaca_nemestrina
ENSPPAG00000038717	SMARCA2	100	98.383	ENSMLEG00000027418	SMARCA2	100	98.383	Mandrillus_leucophaeus
ENSPPAG00000038717	SMARCA2	100	86.499	ENSMAMG00000003056	SMARCA2	92	87.030	Mastacembelus_armatus
ENSPPAG00000038717	SMARCA2	100	81.679	ENSMZEG00005020709	SMARCA2	90	86.779	Maylandia_zebra
ENSPPAG00000038717	SMARCA2	78	91.324	ENSMGAG00000005160	-	91	91.163	Meleagris_gallopavo
ENSPPAG00000038717	SMARCA2	100	95.346	ENSMICG00000005162	SMARCA2	100	95.346	Microcebus_murinus
ENSPPAG00000038717	SMARCA2	100	93.985	ENSMOCG00000001611	Smarca2	100	92.621	Microtus_ochrogaster
ENSPPAG00000038717	SMARCA2	98	79.403	ENSMMOG00000014196	SMARCA2	78	83.819	Mola_mola
ENSPPAG00000038717	SMARCA2	100	90.983	ENSMODG00000003578	SMARCA2	95	98.396	Monodelphis_domestica
ENSPPAG00000038717	SMARCA2	99	79.207	ENSMALG00000009611	SMARCA2	97	78.780	Monopterus_albus
ENSPPAG00000038717	SMARCA2	100	95.135	MGP_CAROLIEiJ_G0022841	Smarca2	100	92.509	Mus_caroli
ENSPPAG00000038717	SMARCA2	100	95.349	ENSMUSG00000024921	Smarca2	99	99.441	Mus_musculus
ENSPPAG00000038717	SMARCA2	100	93.387	MGP_PahariEiJ_G0014334	Smarca2	100	92.654	Mus_pahari
ENSPPAG00000038717	SMARCA2	99	97.259	MGP_SPRETEiJ_G0023759	Smarca2	93	100.000	Mus_spretus
ENSPPAG00000038717	SMARCA2	85	97.831	ENSMPUG00000005171	SMARCA2	93	99.289	Mustela_putorius_furo
ENSPPAG00000038717	SMARCA2	99	92.746	ENSMLUG00000002342	SMARCA2	94	94.320	Myotis_lucifugus
ENSPPAG00000038717	SMARCA2	99	93.338	ENSNGAG00000000108	Smarca2	80	98.655	Nannospalax_galili
ENSPPAG00000038717	SMARCA2	93	69.350	ENSNBRG00000017998	SMARCA2	94	83.085	Neolamprologus_brichardi
ENSPPAG00000038717	SMARCA2	100	97.262	ENSNLEG00000008575	SMARCA2	100	97.262	Nomascus_leucogenys
ENSPPAG00000038717	SMARCA2	100	85.135	ENSMEUG00000009812	SMARCA2	100	82.427	Notamacropus_eugenii
ENSPPAG00000038717	SMARCA2	99	92.913	ENSOPRG00000013474	SMARCA2	93	94.066	Ochotona_princeps
ENSPPAG00000038717	SMARCA2	99	92.544	ENSODEG00000005452	SMARCA2	99	92.396	Octodon_degus
ENSPPAG00000038717	SMARCA2	98	81.999	ENSONIG00000014163	SMARCA2	89	87.964	Oreochromis_niloticus
ENSPPAG00000038717	SMARCA2	55	94.480	ENSOANG00000008299	-	95	98.248	Ornithorhynchus_anatinus
ENSPPAG00000038717	SMARCA2	85	97.964	ENSOCUG00000006320	SMARCA2	79	99.679	Oryctolagus_cuniculus
ENSPPAG00000038717	SMARCA2	100	78.742	ENSORLG00000020820	SMARCA2	93	85.989	Oryzias_latipes
ENSPPAG00000038717	SMARCA2	100	78.855	ENSORLG00015006289	SMARCA2	93	85.989	Oryzias_latipes_hsok
ENSPPAG00000038717	SMARCA2	98	80.805	ENSOMEG00000009736	-	100	79.755	Oryzias_melastigma
ENSPPAG00000038717	SMARCA2	99	97.799	ENSOGAG00000017053	SMARCA2	95	99.436	Otolemur_garnettii
ENSPPAG00000038717	SMARCA2	100	94.031	ENSOARG00000013265	SMARCA2	80	99.199	Ovis_aries
ENSPPAG00000038717	SMARCA2	100	94.409	ENSPPRG00000001879	SMARCA2	100	92.912	Panthera_pardus
ENSPPAG00000038717	SMARCA2	99	95.603	ENSPTRG00000051168	SMARCA2	99	95.603	Pan_troglodytes
ENSPPAG00000038717	SMARCA2	100	90.943	ENSPANG00000025121	SMARCA2	100	91.688	Papio_anubis
ENSPPAG00000038717	SMARCA2	100	83.497	ENSPKIG00000018469	-	93	88.452	Paramormyrops_kingsleyae
ENSPPAG00000038717	SMARCA2	100	88.478	ENSPSIG00000006284	SMARCA2	79	96.157	Pelodiscus_sinensis
ENSPPAG00000038717	SMARCA2	98	76.378	ENSPMGG00000013696	-	97	74.253	Periophthalmus_magnuspinnatus
ENSPPAG00000038717	SMARCA2	100	93.367	ENSPEMG00000019821	Smarca2	100	93.342	Peromyscus_maniculatus_bairdii
ENSPPAG00000038717	SMARCA2	50	81.399	ENSPMAG00000001030	-	100	81.399	Petromyzon_marinus
ENSPPAG00000038717	SMARCA2	94	68.211	ENSPMAG00000005337	-	87	79.392	Petromyzon_marinus
ENSPPAG00000038717	SMARCA2	100	93.620	ENSPCIG00000015658	SMARCA2	95	98.156	Phascolarctos_cinereus
ENSPPAG00000038717	SMARCA2	99	85.322	ENSPFOG00000001856	SMARCA2	90	85.680	Poecilia_formosa
ENSPPAG00000038717	SMARCA2	97	86.011	ENSPLAG00000017829	SMARCA2	86	86.176	Poecilia_latipinna
ENSPPAG00000038717	SMARCA2	97	85.931	ENSPMEG00000001815	-	89	85.669	Poecilia_mexicana
ENSPPAG00000038717	SMARCA2	99	85.479	ENSPREG00000013800	SMARCA2	89	85.909	Poecilia_reticulata
ENSPPAG00000038717	SMARCA2	100	94.347	ENSPPYG00000019258	SMARCA2	100	95.341	Pongo_abelii
ENSPPAG00000038717	SMARCA2	78	92.248	ENSPCAG00000016969	SMARCA2	74	92.248	Procavia_capensis
ENSPPAG00000038717	SMARCA2	100	93.153	ENSPCOG00000025709	SMARCA2	100	92.045	Propithecus_coquereli
ENSPPAG00000038717	SMARCA2	91	98.947	ENSPVAG00000000901	SMARCA2	95	98.947	Pteropus_vampyrus
ENSPPAG00000038717	SMARCA2	100	76.359	ENSPNYG00000004533	SMARCA2	91	82.933	Pundamilia_nyererei
ENSPPAG00000038717	SMARCA2	82	89.869	ENSPNAG00000014635	smarca2	99	77.865	Pygocentrus_nattereri
ENSPPAG00000038717	SMARCA2	100	93.637	ENSRNOG00000011931	Smarca2	100	92.674	Rattus_norvegicus
ENSPPAG00000038717	SMARCA2	100	97.269	ENSRBIG00000038618	SMARCA2	100	97.269	Rhinopithecus_bieti
ENSPPAG00000038717	SMARCA2	100	97.899	ENSRROG00000019271	SMARCA2	100	97.899	Rhinopithecus_roxellana
ENSPPAG00000038717	SMARCA2	100	96.149	ENSSBOG00000034827	SMARCA2	100	96.149	Saimiri_boliviensis_boliviensis
ENSPPAG00000038717	SMARCA2	97	96.364	ENSSHAG00000007884	SMARCA2	95	97.354	Sarcophilus_harrisii
ENSPPAG00000038717	SMARCA2	98	83.666	ENSSFOG00015014870	SMARCA2	77	91.582	Scleropages_formosus
ENSPPAG00000038717	SMARCA2	100	84.766	ENSSMAG00000013707	SMARCA2	95	85.578	Scophthalmus_maximus
ENSPPAG00000038717	SMARCA2	99	84.598	ENSSDUG00000008852	-	88	86.709	Seriola_dumerili
ENSPPAG00000038717	SMARCA2	99	78.463	ENSSLDG00000025449	SMARCA2	96	77.778	Seriola_lalandi_dorsalis
ENSPPAG00000038717	SMARCA2	95	97.368	ENSSARG00000007888	SMARCA2	94	97.126	Sorex_araneus
ENSPPAG00000038717	SMARCA2	95	90.774	ENSSPUG00000001629	SMARCA2	90	92.154	Sphenodon_punctatus
ENSPPAG00000038717	SMARCA2	100	78.094	ENSSPAG00000020091	-	97	79.586	Stegastes_partitus
ENSPPAG00000038717	SMARCA2	100	94.221	ENSSSCG00000005232	SMARCA2	100	93.167	Sus_scrofa
ENSPPAG00000038717	SMARCA2	83	96.554	ENSTGUG00000005460	SMARCA2	93	96.554	Taeniopygia_guttata
ENSPPAG00000038717	SMARCA2	99	81.498	ENSTRUG00000015619	SMARCA2	97	79.986	Takifugu_rubripes
ENSPPAG00000038717	SMARCA2	72	100.000	ENSTBEG00000008767	SMARCA2	74	100.000	Tupaia_belangeri
ENSPPAG00000038717	SMARCA2	99	92.711	ENSTTRG00000002033	SMARCA2	100	89.297	Tursiops_truncatus
ENSPPAG00000038717	SMARCA2	98	95.131	ENSUAMG00000024701	SMARCA2	99	95.315	Ursus_americanus
ENSPPAG00000038717	SMARCA2	90	91.429	ENSVPAG00000001204	SMARCA2	97	90.291	Vicugna_pacos
ENSPPAG00000038717	SMARCA2	80	95.913	ENSVVUG00000004598	SMARCA2	99	95.913	Vulpes_vulpes
ENSPPAG00000038717	SMARCA2	97	85.768	ENSXETG00000015299	smarca2	92	89.092	Xenopus_tropicalis
ENSPPAG00000038717	SMARCA2	98	77.614	ENSXCOG00000011073	SMARCA2	89	85.874	Xiphophorus_couchianus
ENSPPAG00000038717	SMARCA2	99	85.400	ENSXMAG00000015611	SMARCA2	91	85.829	Xiphophorus_maculatus