EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPAG00000038886 (Gene tree)
Gene ID: 100987169
Gene Symbol: MBD1
Alias: -
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 12927 bases
Position: chr18:46996905-47009831
Accession: 100987169
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000032090	MBD	PF01429.19	3.6e-16	1	1
ENSPPAP00000032094	MBD	PF01429.19	4.1e-16	1	1
ENSPPAP00000032111	MBD	PF01429.19	4.3e-16	1	1
ENSPPAP00000032081	MBD	PF01429.19	4.6e-16	1	1
ENSPPAP00000032104	MBD	PF01429.19	4.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000054960	MBD1-203	3219	XM_008952576	ENSPPAP00000032094	559 (aa)	XP_008950824	A0A2R9C023
ENSPPAT00000054956	MBD1-202	3264	XM_008952577	ENSPPAP00000032090	574 (aa)	XP_008950825	A0A2R9BUH0
ENSPPAT00000054947	MBD1-201	3357	XM_003827214	ENSPPAP00000032081	605 (aa)	XP_008950817	A0A2R9BQX9
ENSPPAT00000054970	MBD1-204	3188	XM_003827212	ENSPPAP00000032104	655 (aa)	XP_003827260	A0A2R9C032
ENSPPAT00000054977	MBD1-205	1821	-	ENSPPAP00000032111	606 (aa)	-	A0A2R9BRP9

Gene Model

Click here to download ENSPPAG00000038886's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000038886's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000038886	MBD1	100	99.835	ENSG00000141644	MBD1	100	99.835	Homo_sapiens
ENSPPAG00000038886	MBD1	100	84.019	ENSAMEG00000000238	MBD1	96	83.386	Ailuropoda_melanoleuca
ENSPPAG00000038886	MBD1	68	45.209	ENSACAG00000006091	-	100	44.802	Anolis_carolinensis
ENSPPAG00000038886	MBD1	100	96.183	ENSANAG00000036253	MBD1	100	96.183	Aotus_nancymaae
ENSPPAG00000038886	MBD1	100	86.139	ENSBTAG00000003801	MBD1	100	86.304	Bos_taurus
ENSPPAG00000038886	MBD1	100	96.336	ENSCJAG00000004959	MBD1	100	96.336	Callithrix_jacchus
ENSPPAG00000038886	MBD1	100	83.360	ENSCAFG00000018928	MBD1	96	84.152	Canis_familiaris
ENSPPAG00000038886	MBD1	99	82.504	ENSCAFG00020024272	MBD1	97	83.414	Canis_lupus_dingo
ENSPPAG00000038886	MBD1	100	86.139	ENSCHIG00000021134	MBD1	100	86.304	Capra_hircus
ENSPPAG00000038886	MBD1	100	90.840	ENSTSYG00000000509	MBD1	100	90.840	Carlito_syrichta
ENSPPAG00000038886	MBD1	99	69.258	ENSCAPG00000015782	MBD1	96	68.421	Cavia_aperea
ENSPPAG00000038886	MBD1	100	68.981	ENSCPOG00000001671	MBD1	100	73.053	Cavia_porcellus
ENSPPAG00000038886	MBD1	100	94.327	ENSCCAG00000034600	MBD1	100	94.077	Cebus_capucinus
ENSPPAG00000038886	MBD1	100	99.339	ENSCATG00000029959	MBD1	100	99.339	Cercocebus_atys
ENSPPAG00000038886	MBD1	100	82.063	ENSCLAG00000007457	MBD1	89	82.381	Chinchilla_lanigera
ENSPPAG00000038886	MBD1	100	99.669	ENSCSAG00000018070	MBD1	100	99.669	Chlorocebus_sabaeus
ENSPPAG00000038886	MBD1	100	99.339	ENSCANG00000033425	MBD1	100	99.339	Colobus_angolensis_palliatus
ENSPPAG00000038886	MBD1	100	75.041	ENSCGRG00001014843	Mbd1	100	75.041	Cricetulus_griseus_chok1gshd
ENSPPAG00000038886	MBD1	99	63.668	ENSCGRG00000014135	Mbd1	96	63.492	Cricetulus_griseus_crigri
ENSPPAG00000038886	MBD1	100	77.813	ENSDNOG00000015998	MBD1	100	80.032	Dasypus_novemcinctus
ENSPPAG00000038886	MBD1	99	74.558	ENSDORG00000013917	Mbd1	97	78.963	Dipodomys_ordii
ENSPPAG00000038886	MBD1	100	86.454	ENSEASG00005003857	MBD1	100	87.976	Equus_asinus_asinus
ENSPPAG00000038886	MBD1	100	86.326	ENSECAG00000011497	MBD1	80	87.974	Equus_caballus
ENSPPAG00000038886	MBD1	100	87.367	ENSFCAG00000015730	MBD1	100	86.758	Felis_catus
ENSPPAG00000038886	MBD1	99	80.492	ENSFDAG00000011085	MBD1	96	80.480	Fukomys_damarensis
ENSPPAG00000038886	MBD1	69	31.771	ENSGACG00000012106	-	58	32.591	Gasterosteus_aculeatus
ENSPPAG00000038886	MBD1	100	99.504	ENSGGOG00000016966	MBD1	100	99.504	Gorilla_gorilla
ENSPPAG00000038886	MBD1	100	85.950	ENSHGLG00000008740	MBD1	100	85.950	Heterocephalus_glaber_female
ENSPPAG00000038886	MBD1	100	81.010	ENSHGLG00100005198	MBD1	100	81.185	Heterocephalus_glaber_male
ENSPPAG00000038886	MBD1	61	38.650	ENSIPUG00000015243	-	50	50.602	Ictalurus_punctatus
ENSPPAG00000038886	MBD1	100	83.415	ENSSTOG00000007780	MBD1	100	83.902	Ictidomys_tridecemlineatus
ENSPPAG00000038886	MBD1	98	75.355	ENSJJAG00000022859	Mbd1	96	75.355	Jaculus_jaculus
ENSPPAG00000038886	MBD1	96	34.854	ENSLACG00000002414	-	78	34.672	Latimeria_chalumnae
ENSPPAG00000038886	MBD1	99	75.954	ENSLAFG00000031328	MBD1	98	75.205	Loxodonta_africana
ENSPPAG00000038886	MBD1	100	99.174	ENSMFAG00000026335	MBD1	100	99.174	Macaca_fascicularis
ENSPPAG00000038886	MBD1	100	95.238	ENSMMUG00000009050	MBD1	100	95.238	Macaca_mulatta
ENSPPAG00000038886	MBD1	100	99.174	ENSMNEG00000038822	MBD1	100	99.174	Macaca_nemestrina
ENSPPAG00000038886	MBD1	100	99.504	ENSMLEG00000043121	MBD1	100	99.504	Mandrillus_leucophaeus
ENSPPAG00000038886	MBD1	73	36.058	ENSMAMG00000023341	-	60	32.824	Mastacembelus_armatus
ENSPPAG00000038886	MBD1	100	89.919	ENSMICG00000006414	MBD1	100	90.244	Microcebus_murinus
ENSPPAG00000038886	MBD1	70	43.415	ENSMODG00000001286	-	58	43.478	Monodelphis_domestica
ENSPPAG00000038886	MBD1	99	67.886	ENSMUSG00000024561	Mbd1	97	68.530	Mus_musculus
ENSPPAG00000038886	MBD1	100	68.680	MGP_PahariEiJ_G0019128	Mbd1	100	68.521	Mus_pahari
ENSPPAG00000038886	MBD1	98	69.368	MGP_SPRETEiJ_G0023304	Mbd1	99	69.805	Mus_spretus
ENSPPAG00000038886	MBD1	100	83.544	ENSMPUG00000008843	MBD1	96	83.228	Mustela_putorius_furo
ENSPPAG00000038886	MBD1	100	81.587	ENSMLUG00000008286	MBD1	96	81.587	Myotis_lucifugus
ENSPPAG00000038886	MBD1	98	73.391	ENSNGAG00000011412	Mbd1	96	73.391	Nannospalax_galili
ENSPPAG00000038886	MBD1	98	85.205	ENSNLEG00000032711	-	100	81.374	Nomascus_leucogenys
ENSPPAG00000038886	MBD1	100	98.843	ENSNLEG00000011661	-	100	98.843	Nomascus_leucogenys
ENSPPAG00000038886	MBD1	100	74.711	ENSOPRG00000007647	MBD1	100	74.711	Ochotona_princeps
ENSPPAG00000038886	MBD1	99	78.269	ENSODEG00000018451	MBD1	97	81.019	Octodon_degus
ENSPPAG00000038886	MBD1	91	46.139	ENSOANG00000014593	-	100	47.727	Ornithorhynchus_anatinus
ENSPPAG00000038886	MBD1	100	80.032	ENSOCUG00000006554	MBD1	100	80.824	Oryctolagus_cuniculus
ENSPPAG00000038886	MBD1	100	84.375	ENSOGAG00000003784	MBD1	96	84.375	Otolemur_garnettii
ENSPPAG00000038886	MBD1	100	82.437	ENSOARG00000004218	MBD1	95	82.595	Ovis_aries
ENSPPAG00000038886	MBD1	100	88.468	ENSPPRG00000021387	MBD1	100	87.809	Panthera_pardus
ENSPPAG00000038886	MBD1	100	88.468	ENSPTIG00000021231	MBD1	100	87.809	Panthera_tigris_altaica
ENSPPAG00000038886	MBD1	100	100.000	ENSPTRG00000010021	MBD1	100	100.000	Pan_troglodytes
ENSPPAG00000038886	MBD1	100	99.389	ENSPANG00000010867	MBD1	100	99.389	Papio_anubis
ENSPPAG00000038886	MBD1	99	63.993	ENSPEMG00000022630	Mbd1	97	63.932	Peromyscus_maniculatus_bairdii
ENSPPAG00000038886	MBD1	92	53.681	ENSPCIG00000027937	-	79	46.809	Phascolarctos_cinereus
ENSPPAG00000038886	MBD1	62	53.846	ENSPMEG00000024145	mbd1b	50	32.338	Poecilia_mexicana
ENSPPAG00000038886	MBD1	100	99.339	ENSPPYG00000009158	MBD1	91	99.339	Pongo_abelii
ENSPPAG00000038886	MBD1	99	76.529	ENSPCAG00000001648	MBD1	99	76.529	Procavia_capensis
ENSPPAG00000038886	MBD1	100	92.574	ENSPCOG00000012450	MBD1	100	92.574	Propithecus_coquereli
ENSPPAG00000038886	MBD1	99	55.272	ENSRNOG00000024104	Mbd1	98	61.258	Rattus_norvegicus
ENSPPAG00000038886	MBD1	100	91.074	ENSRBIG00000041294	MBD1	98	99.079	Rhinopithecus_bieti
ENSPPAG00000038886	MBD1	100	99.174	ENSRROG00000032517	MBD1	100	99.174	Rhinopithecus_roxellana
ENSPPAG00000038886	MBD1	100	95.645	ENSSBOG00000027169	MBD1	100	95.645	Saimiri_boliviensis_boliviensis
ENSPPAG00000038886	MBD1	82	46.253	ENSSHAG00000003661	-	100	47.335	Sarcophilus_harrisii
ENSPPAG00000038886	MBD1	50	51.111	ENSSPAG00000021447	mbd1b	51	33.166	Stegastes_partitus
ENSPPAG00000038886	MBD1	100	86.116	ENSSSCG00000004516	MBD1	100	86.116	Sus_scrofa
ENSPPAG00000038886	MBD1	50	50.538	ENSTRUG00000013422	mbd1b	50	31.026	Takifugu_rubripes
ENSPPAG00000038886	MBD1	68	84.167	ENSTBEG00000012651	-	68	84.167	Tupaia_belangeri
ENSPPAG00000038886	MBD1	100	84.679	ENSTTRG00000015523	MBD1	100	84.185	Tursiops_truncatus
ENSPPAG00000038886	MBD1	100	83.003	ENSUAMG00000004752	MBD1	100	83.993	Ursus_americanus
ENSPPAG00000038886	MBD1	100	87.644	ENSUMAG00000002947	MBD1	100	86.985	Ursus_maritimus