EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPPAG00000039666 (Gene tree)
Gene ID: 100977451
Gene Symbol: CPSF2
Alias: -
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Plus strand
Length: 41170 bases
Position: chr14:92099301-92140470
Accession: 100977451
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000033596	Beta-Casp	PF10996.8	1.4e-20	1	1
ENSPPAP00000033596	Lactamase_B	PF00753.27	2.3e-06	1	1
ENSPPAP00000033596	RMMBL	PF07521.12	1.7e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000056475	CPSF2-202	189	-	ENSPPAP00000033599	62 (aa)	-	A0A2R9C4Z6
ENSPPAT00000056472	CPSF2-201	4469	XM_003832778	ENSPPAP00000033596	782 (aa)	XP_003832826	A0A2R9BVW1

Gene Model

Click here to download ENSPPAG00000039666's gene model file

Pathways

Pathway ID	Pathway Name	Source
pps03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000039666's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000039666	CPSF2	100	100.000	ENSG00000165934	CPSF2	100	100.000	Homo_sapiens
ENSPPAG00000039666	CPSF2	100	85.805	ENSAPOG00000001242	cpsf2	100	85.805	Acanthochromis_polyacanthus
ENSPPAG00000039666	CPSF2	100	86.203	ENSACIG00000009331	cpsf2	100	86.203	Amphilophus_citrinellus
ENSPPAG00000039666	CPSF2	100	85.932	ENSAOCG00000014095	cpsf2	100	85.932	Amphiprion_ocellaris
ENSPPAG00000039666	CPSF2	100	85.932	ENSAPEG00000009158	cpsf2	100	85.932	Amphiprion_percula
ENSPPAG00000039666	CPSF2	96	86.184	ENSATEG00000017644	cpsf2	100	84.307	Anabas_testudineus
ENSPPAG00000039666	CPSF2	100	96.051	ENSAPLG00000006330	CPSF2	100	96.051	Anas_platyrhynchos
ENSPPAG00000039666	CPSF2	100	95.275	ENSACAG00000009245	CPSF2	100	95.275	Anolis_carolinensis
ENSPPAG00000039666	CPSF2	100	99.744	ENSANAG00000022915	CPSF2	100	99.744	Aotus_nancymaae
ENSPPAG00000039666	CPSF2	100	85.642	ENSAMXG00000018696	cpsf2	100	85.642	Astyanax_mexicanus
ENSPPAG00000039666	CPSF2	100	99.616	ENSBTAG00000010227	CPSF2	100	99.616	Bos_taurus
ENSPPAG00000039666	CPSF2	100	41.569	WBGene00017313	cpsf-2	100	41.032	Caenorhabditis_elegans
ENSPPAG00000039666	CPSF2	100	99.744	ENSCJAG00000018069	CPSF2	100	99.744	Callithrix_jacchus
ENSPPAG00000039666	CPSF2	100	99.616	ENSCAFG00000010909	CPSF2	100	99.616	Canis_familiaris
ENSPPAG00000039666	CPSF2	100	99.616	ENSCAFG00020020670	CPSF2	100	99.616	Canis_lupus_dingo
ENSPPAG00000039666	CPSF2	100	99.616	ENSCHIG00000023848	CPSF2	100	99.616	Capra_hircus
ENSPPAG00000039666	CPSF2	100	98.593	ENSTSYG00000009036	CPSF2	100	98.593	Carlito_syrichta
ENSPPAG00000039666	CPSF2	100	99.744	ENSCPOG00000010899	CPSF2	100	99.744	Cavia_porcellus
ENSPPAG00000039666	CPSF2	100	99.744	ENSCCAG00000028088	CPSF2	100	99.744	Cebus_capucinus
ENSPPAG00000039666	CPSF2	100	99.872	ENSCATG00000030132	CPSF2	100	99.872	Cercocebus_atys
ENSPPAG00000039666	CPSF2	100	99.616	ENSCLAG00000012404	CPSF2	100	99.616	Chinchilla_lanigera
ENSPPAG00000039666	CPSF2	100	99.872	ENSCSAG00000011300	CPSF2	100	99.872	Chlorocebus_sabaeus
ENSPPAG00000039666	CPSF2	100	92.583	ENSCHOG00000012904	CPSF2	100	92.583	Choloepus_hoffmanni
ENSPPAG00000039666	CPSF2	100	96.296	ENSCPBG00000008766	CPSF2	97	96.296	Chrysemys_picta_bellii
ENSPPAG00000039666	CPSF2	100	54.875	ENSCING00000007881	-	100	54.500	Ciona_intestinalis
ENSPPAG00000039666	CPSF2	94	99.863	ENSCANG00000041651	CPSF2	100	99.863	Colobus_angolensis_palliatus
ENSPPAG00000039666	CPSF2	100	98.465	ENSCGRG00001006901	Cpsf2	100	98.465	Cricetulus_griseus_chok1gshd
ENSPPAG00000039666	CPSF2	100	98.465	ENSCGRG00000012416	Cpsf2	100	98.465	Cricetulus_griseus_crigri
ENSPPAG00000039666	CPSF2	100	83.777	ENSCSEG00000004116	cpsf2	100	83.777	Cynoglossus_semilaevis
ENSPPAG00000039666	CPSF2	100	85.171	ENSCVAG00000000095	cpsf2	100	85.298	Cyprinodon_variegatus
ENSPPAG00000039666	CPSF2	100	85.696	ENSDARG00000028971	cpsf2	100	85.696	Danio_rerio
ENSPPAG00000039666	CPSF2	100	99.488	ENSDNOG00000042757	CPSF2	100	99.488	Dasypus_novemcinctus
ENSPPAG00000039666	CPSF2	100	99.361	ENSDORG00000013709	Cpsf2	100	99.361	Dipodomys_ordii
ENSPPAG00000039666	CPSF2	100	53.923	FBgn0027873	Cpsf100	100	53.683	Drosophila_melanogaster
ENSPPAG00000039666	CPSF2	100	90.294	ENSETEG00000012123	CPSF2	100	90.294	Echinops_telfairi
ENSPPAG00000039666	CPSF2	52	76.471	ENSEBUG00000012098	cpsf2	93	76.471	Eptatretus_burgeri
ENSPPAG00000039666	CPSF2	91	97.611	ENSEASG00005021193	CPSF2	100	97.611	Equus_asinus_asinus
ENSPPAG00000039666	CPSF2	100	99.488	ENSECAG00000023935	CPSF2	100	99.488	Equus_caballus
ENSPPAG00000039666	CPSF2	100	83.940	ENSELUG00000008442	cpsf2	100	83.940	Esox_lucius
ENSPPAG00000039666	CPSF2	100	99.488	ENSFCAG00000007886	CPSF2	100	99.488	Felis_catus
ENSPPAG00000039666	CPSF2	100	96.296	ENSFALG00000002412	CPSF2	100	96.296	Ficedula_albicollis
ENSPPAG00000039666	CPSF2	100	99.616	ENSFDAG00000006327	CPSF2	100	99.616	Fukomys_damarensis
ENSPPAG00000039666	CPSF2	96	84.575	ENSFHEG00000015465	cpsf2	98	85.098	Fundulus_heteroclitus
ENSPPAG00000039666	CPSF2	100	83.586	ENSGMOG00000008761	cpsf2	100	83.586	Gadus_morhua
ENSPPAG00000039666	CPSF2	100	95.530	ENSGALG00000010783	CPSF2	100	96.041	Gallus_gallus
ENSPPAG00000039666	CPSF2	100	85.425	ENSGAFG00000001407	cpsf2	100	85.425	Gambusia_affinis
ENSPPAG00000039666	CPSF2	100	84.537	ENSGACG00000008418	cpsf2	100	84.537	Gasterosteus_aculeatus
ENSPPAG00000039666	CPSF2	100	96.424	ENSGAGG00000008287	CPSF2	100	96.424	Gopherus_agassizii
ENSPPAG00000039666	CPSF2	100	100.000	ENSGGOG00000011799	CPSF2	100	100.000	Gorilla_gorilla
ENSPPAG00000039666	CPSF2	100	85.171	ENSHBUG00000023466	cpsf2	100	85.171	Haplochromis_burtoni
ENSPPAG00000039666	CPSF2	100	99.488	ENSHGLG00000018311	CPSF2	100	99.488	Heterocephalus_glaber_female
ENSPPAG00000039666	CPSF2	100	99.488	ENSHGLG00100016460	CPSF2	100	99.488	Heterocephalus_glaber_male
ENSPPAG00000039666	CPSF2	100	84.537	ENSHCOG00000019527	cpsf2	98	84.537	Hippocampus_comes
ENSPPAG00000039666	CPSF2	100	85.642	ENSIPUG00000020857	cpsf2	100	85.642	Ictalurus_punctatus
ENSPPAG00000039666	CPSF2	100	99.616	ENSSTOG00000009528	CPSF2	100	99.616	Ictidomys_tridecemlineatus
ENSPPAG00000039666	CPSF2	100	99.233	ENSJJAG00000017925	Cpsf2	100	99.233	Jaculus_jaculus
ENSPPAG00000039666	CPSF2	100	84.664	ENSKMAG00000019429	cpsf2	100	84.664	Kryptolebias_marmoratus
ENSPPAG00000039666	CPSF2	95	84.358	ENSLBEG00000011585	cpsf2	100	84.492	Labrus_bergylta
ENSPPAG00000039666	CPSF2	100	89.655	ENSLACG00000019024	CPSF2	100	89.911	Latimeria_chalumnae
ENSPPAG00000039666	CPSF2	100	87.706	ENSLOCG00000014102	cpsf2	100	87.706	Lepisosteus_oculatus
ENSPPAG00000039666	CPSF2	100	99.490	ENSLAFG00000004891	CPSF2	100	99.490	Loxodonta_africana
ENSPPAG00000039666	CPSF2	100	99.872	ENSMFAG00000041212	CPSF2	100	99.872	Macaca_fascicularis
ENSPPAG00000039666	CPSF2	100	99.872	ENSMMUG00000000699	CPSF2	100	99.872	Macaca_mulatta
ENSPPAG00000039666	CPSF2	100	99.872	ENSMNEG00000031584	CPSF2	100	99.872	Macaca_nemestrina
ENSPPAG00000039666	CPSF2	100	99.872	ENSMLEG00000029394	CPSF2	100	99.872	Mandrillus_leucophaeus
ENSPPAG00000039666	CPSF2	100	85.805	ENSMAMG00000004235	cpsf2	100	85.805	Mastacembelus_armatus
ENSPPAG00000039666	CPSF2	100	85.298	ENSMZEG00005001769	cpsf2	100	85.298	Maylandia_zebra
ENSPPAG00000039666	CPSF2	100	96.046	ENSMGAG00000013122	CPSF2	100	96.046	Meleagris_gallopavo
ENSPPAG00000039666	CPSF2	100	98.465	ENSMAUG00000015160	Cpsf2	100	98.465	Mesocricetus_auratus
ENSPPAG00000039666	CPSF2	100	99.744	ENSMICG00000016441	CPSF2	100	99.744	Microcebus_murinus
ENSPPAG00000039666	CPSF2	100	98.465	ENSMOCG00000015372	Cpsf2	100	98.465	Microtus_ochrogaster
ENSPPAG00000039666	CPSF2	100	80.989	ENSMMOG00000015590	cpsf2	100	80.989	Mola_mola
ENSPPAG00000039666	CPSF2	100	98.849	ENSMODG00000002042	CPSF2	100	98.849	Monodelphis_domestica
ENSPPAG00000039666	CPSF2	100	82.636	ENSMALG00000022275	cpsf2	100	82.636	Monopterus_albus
ENSPPAG00000039666	CPSF2	100	97.954	ENSMUSG00000041781	Cpsf2	100	97.954	Mus_musculus
ENSPPAG00000039666	CPSF2	100	98.210	MGP_PahariEiJ_G0029791	Cpsf2	100	98.210	Mus_pahari
ENSPPAG00000039666	CPSF2	100	97.954	MGP_SPRETEiJ_G0018877	Cpsf2	100	97.954	Mus_spretus
ENSPPAG00000039666	CPSF2	100	99.616	ENSMPUG00000007617	CPSF2	98	99.616	Mustela_putorius_furo
ENSPPAG00000039666	CPSF2	100	98.849	ENSMLUG00000005570	CPSF2	100	98.849	Myotis_lucifugus
ENSPPAG00000039666	CPSF2	100	98.977	ENSNGAG00000020312	Cpsf2	100	98.977	Nannospalax_galili
ENSPPAG00000039666	CPSF2	100	85.678	ENSNBRG00000022402	cpsf2	100	85.678	Neolamprologus_brichardi
ENSPPAG00000039666	CPSF2	100	99.105	ENSNLEG00000017132	CPSF2	100	99.105	Nomascus_leucogenys
ENSPPAG00000039666	CPSF2	91	99.676	ENSMEUG00000008138	CPSF2	91	99.676	Notamacropus_eugenii
ENSPPAG00000039666	CPSF2	94	91.667	ENSOPRG00000008484	-	100	91.667	Ochotona_princeps
ENSPPAG00000039666	CPSF2	100	99.361	ENSODEG00000008682	CPSF2	100	99.361	Octodon_degus
ENSPPAG00000039666	CPSF2	100	86.058	ENSONIG00000005901	cpsf2	100	86.058	Oreochromis_niloticus
ENSPPAG00000039666	CPSF2	100	98.465	ENSOANG00000003822	CPSF2	100	98.465	Ornithorhynchus_anatinus
ENSPPAG00000039666	CPSF2	100	99.233	ENSOCUG00000005713	CPSF2	100	99.233	Oryctolagus_cuniculus
ENSPPAG00000039666	CPSF2	100	80.101	ENSORLG00000011628	cpsf2	100	80.101	Oryzias_latipes
ENSPPAG00000039666	CPSF2	100	84.918	ENSORLG00020016980	cpsf2	100	84.918	Oryzias_latipes_hni
ENSPPAG00000039666	CPSF2	100	84.918	ENSORLG00015011910	cpsf2	100	84.918	Oryzias_latipes_hsok
ENSPPAG00000039666	CPSF2	100	84.284	ENSOMEG00000022876	cpsf2	100	84.284	Oryzias_melastigma
ENSPPAG00000039666	CPSF2	100	96.556	ENSOARG00000012889	CPSF2	100	96.556	Ovis_aries
ENSPPAG00000039666	CPSF2	99	99.488	ENSPPRG00000010869	CPSF2	100	99.488	Panthera_pardus
ENSPPAG00000039666	CPSF2	100	99.488	ENSPTIG00000021202	CPSF2	100	99.488	Panthera_tigris_altaica
ENSPPAG00000039666	CPSF2	100	100.000	ENSPTRG00000006651	CPSF2	100	100.000	Pan_troglodytes
ENSPPAG00000039666	CPSF2	100	99.872	ENSPANG00000017417	CPSF2	100	99.872	Papio_anubis
ENSPPAG00000039666	CPSF2	100	81.957	ENSPKIG00000021453	cpsf2	100	81.957	Paramormyrops_kingsleyae
ENSPPAG00000039666	CPSF2	100	95.785	ENSPSIG00000006289	CPSF2	100	95.785	Pelodiscus_sinensis
ENSPPAG00000039666	CPSF2	76	79.568	ENSPMGG00000002511	cpsf2	100	79.734	Periophthalmus_magnuspinnatus
ENSPPAG00000039666	CPSF2	100	98.721	ENSPEMG00000007917	Cpsf2	100	98.721	Peromyscus_maniculatus_bairdii
ENSPPAG00000039666	CPSF2	100	74.336	ENSPMAG00000006205	cpsf2	100	74.336	Petromyzon_marinus
ENSPPAG00000039666	CPSF2	100	98.849	ENSPCIG00000011393	CPSF2	100	98.849	Phascolarctos_cinereus
ENSPPAG00000039666	CPSF2	100	85.298	ENSPFOG00000018648	cpsf2	100	85.298	Poecilia_formosa
ENSPPAG00000039666	CPSF2	100	85.298	ENSPLAG00000019199	cpsf2	99	85.298	Poecilia_latipinna
ENSPPAG00000039666	CPSF2	96	85.658	ENSPMEG00000012100	cpsf2	100	85.027	Poecilia_mexicana
ENSPPAG00000039666	CPSF2	100	85.171	ENSPREG00000008960	cpsf2	100	85.171	Poecilia_reticulata
ENSPPAG00000039666	CPSF2	63	100.000	ENSPPYG00000029685	-	100	100.000	Pongo_abelii
ENSPPAG00000039666	CPSF2	100	99.488	ENSPCAG00000012477	CPSF2	100	99.488	Procavia_capensis
ENSPPAG00000039666	CPSF2	100	99.744	ENSPCOG00000026387	CPSF2	100	99.744	Propithecus_coquereli
ENSPPAG00000039666	CPSF2	65	100.000	ENSPVAG00000004223	CPSF2	65	100.000	Pteropus_vampyrus
ENSPPAG00000039666	CPSF2	100	85.316	ENSPNYG00000023356	cpsf2	100	85.316	Pundamilia_nyererei
ENSPPAG00000039666	CPSF2	100	86.785	ENSPNAG00000001849	cpsf2	100	86.785	Pygocentrus_nattereri
ENSPPAG00000039666	CPSF2	100	98.338	ENSRNOG00000005733	Cpsf2	100	98.338	Rattus_norvegicus
ENSPPAG00000039666	CPSF2	100	99.872	ENSRBIG00000044792	CPSF2	100	99.872	Rhinopithecus_bieti
ENSPPAG00000039666	CPSF2	100	99.872	ENSRROG00000034875	CPSF2	100	99.872	Rhinopithecus_roxellana
ENSPPAG00000039666	CPSF2	100	99.744	ENSSBOG00000024571	CPSF2	100	99.744	Saimiri_boliviensis_boliviensis
ENSPPAG00000039666	CPSF2	100	98.977	ENSSHAG00000010458	CPSF2	100	98.977	Sarcophilus_harrisii
ENSPPAG00000039666	CPSF2	100	87.675	ENSSFOG00015002117	cpsf2	100	87.675	Scleropages_formosus
ENSPPAG00000039666	CPSF2	100	84.030	ENSSMAG00000002001	cpsf2	100	84.030	Scophthalmus_maximus
ENSPPAG00000039666	CPSF2	100	86.185	ENSSDUG00000004084	cpsf2	100	86.185	Seriola_dumerili
ENSPPAG00000039666	CPSF2	100	85.678	ENSSLDG00000024330	cpsf2	100	85.678	Seriola_lalandi_dorsalis
ENSPPAG00000039666	CPSF2	58	100.000	ENSSARG00000009784	-	63	100.000	Sorex_araneus
ENSPPAG00000039666	CPSF2	100	95.785	ENSSPUG00000013485	CPSF2	100	95.785	Sphenodon_punctatus
ENSPPAG00000039666	CPSF2	100	85.171	ENSSPAG00000013284	cpsf2	100	85.171	Stegastes_partitus
ENSPPAG00000039666	CPSF2	100	99.488	ENSSSCG00000002447	CPSF2	100	99.488	Sus_scrofa
ENSPPAG00000039666	CPSF2	100	96.424	ENSTGUG00000012571	-	100	96.424	Taeniopygia_guttata
ENSPPAG00000039666	CPSF2	100	84.918	ENSTRUG00000003742	cpsf2	100	84.918	Takifugu_rubripes
ENSPPAG00000039666	CPSF2	100	83.692	ENSTNIG00000012228	cpsf2	100	84.450	Tetraodon_nigroviridis
ENSPPAG00000039666	CPSF2	91	100.000	ENSTBEG00000004530	CPSF2	94	100.000	Tupaia_belangeri
ENSPPAG00000039666	CPSF2	88	100.000	ENSTTRG00000008697	CPSF2	88	100.000	Tursiops_truncatus
ENSPPAG00000039666	CPSF2	100	99.744	ENSUAMG00000028071	CPSF2	100	99.744	Ursus_americanus
ENSPPAG00000039666	CPSF2	100	99.744	ENSUMAG00000005029	CPSF2	100	99.744	Ursus_maritimus
ENSPPAG00000039666	CPSF2	99	99.616	ENSVPAG00000003503	CPSF2	100	99.616	Vicugna_pacos
ENSPPAG00000039666	CPSF2	100	99.616	ENSVVUG00000024642	CPSF2	100	99.616	Vulpes_vulpes
ENSPPAG00000039666	CPSF2	100	92.082	ENSXETG00000010289	cpsf2	100	92.082	Xenopus_tropicalis
ENSPPAG00000039666	CPSF2	100	85.678	ENSXCOG00000001764	cpsf2	100	85.678	Xiphophorus_couchianus
ENSPPAG00000039666	CPSF2	100	85.805	ENSXMAG00000017048	cpsf2	100	85.805	Xiphophorus_maculatus