EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPPAG00000039677 (Gene tree)
Gene ID
100982483
Gene Symbol
PABPC1L
Alias
-
Full Name
poly(A) binding protein cytoplasmic 1 like
Gene Type
protein_coding
Species
Pan_paniscus
Status
putative
Strand
Plus strand
Length
42258 bases
Position
chr20:42333593-42375850
Accession
100982483
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPPAP00000033607PABPPF00658.181.3e-2711
ENSPPAP00000033626PABPPF00658.187.6e-2511
ENSPPAP00000033618PABPPF00658.185.1e-2411
ENSPPAP00000033607RRM_5PF13893.61.1e-0911
ENSPPAP00000033607RRM_1PF00076.228.6e-9014
ENSPPAP00000033607RRM_1PF00076.228.6e-9024
ENSPPAP00000033607RRM_1PF00076.228.6e-9034
ENSPPAP00000033607RRM_1PF00076.228.6e-9044
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPPAT00000056502PABPC1L-203450-ENSPPAP00000033626149 (aa)-A0A2R9BVZ0
ENSPPAT00000056494PABPC1L-2022065-ENSPPAP00000033618171 (aa)-A0A2R9BVB0
ENSPPAT00000056483PABPC1L-2012125XM_003825941ENSPPAP00000033607614 (aa)XP_003825989A0A2R9BVA1
Gene Model
Click here to download ENSPPAG00000039677's gene model file
Pathways
Pathway IDPathway NameSource
pps03013RNA transportKEGG
pps03015mRNA surveillance pathwayKEGG
pps03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000039677's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPPAG00000039677PABPC1L5632.692ENSPPAG00000005303HNRNPA05232.692
ENSPPAG00000039677PABPC1L6941.429ENSPPAG00000042402ELAVL49041.429
ENSPPAG00000039677PABPC1L6134.940ENSPPAG00000041539ELAVL29034.940
ENSPPAG00000039677PABPC1L6071.066ENSPPAG00000012920-9971.066
ENSPPAG00000039677PABPC1L5938.710ENSPPAG00000043712RBM196938.710
ENSPPAG00000039677PABPC1L9967.255ENSPPAG00000043625PABPC49866.720
ENSPPAG00000039677PABPC1L9852.961ENSPPAG00000036729-9652.554
ENSPPAG00000039677PABPC1L5630.994ENSPPAG00000043098TIAL17930.682
ENSPPAG00000039677PABPC1L5735.616ENSPPAG00000038551CELF39035.616
ENSPPAG00000039677PABPC1L5935.450ENSPPAG00000030024-5635.450
ENSPPAG00000039677PABPC1L5630.128ENSPPAG00000018027HNRNPA18830.128
ENSPPAG00000039677PABPC1L9965.512ENSPPAG00000037498-9866.332
ENSPPAG00000039677PABPC1L5233.784ENSPPAG00000029170CELF26633.784
ENSPPAG00000039677PABPC1L6338.571ENSPPAG00000033972ELAVL39033.735
ENSPPAG00000039677PABPC1L5934.568ENSPPAG00000035262ELAVL19431.188
ENSPPAG00000039677PABPC1L6361.162ENSPPAG00000043745PABPC4L9561.162
ENSPPAG00000039677PABPC1L6159.551ENSPPAG00000007378PABPC59659.504
ENSPPAG00000039677PABPC1L5235.135ENSPPAG00000033870CELF16935.135
ENSPPAG00000039677PABPC1L8565.217ENSPPAG00000037955-9665.217
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPPAG00000039677PABPC1L100100.000ENSG00000101104PABPC1L100100.000Homo_sapiens
ENSPPAG00000039677PABPC1L9966.401ENSAPOG00000010842pabpc1l9966.188Acanthochromis_polyacanthus
ENSPPAG00000039677PABPC1L9978.125ENSAMEG00000004099PABPC1L10078.438Ailuropoda_melanoleuca
ENSPPAG00000039677PABPC1L9869.074ENSACIG00000021004-9980.220Amphilophus_citrinellus
ENSPPAG00000039677PABPC1L9966.351ENSAOCG00000006167-9966.351Amphiprion_ocellaris
ENSPPAG00000039677PABPC1L9972.422ENSAPEG00000010558-9977.647Amphiprion_percula
ENSPPAG00000039677PABPC1L9969.305ENSATEG00000007428pabpc1l9969.305Anabas_testudineus
ENSPPAG00000039677PABPC1L9774.757ENSAPLG00000008415PABPC1L9874.839Anas_platyrhynchos
ENSPPAG00000039677PABPC1L9974.799ENSACAG00000011841PABPC1L9874.639Anolis_carolinensis
ENSPPAG00000039677PABPC1L10096.417ENSANAG00000026826PABPC1L10096.417Aotus_nancymaae
ENSPPAG00000039677PABPC1L9967.670ENSACLG00000024791pabpc1l9967.670Astatotilapia_calliptera
ENSPPAG00000039677PABPC1L9970.767ENSAMXG00000013552pabpc1l9970.240Astyanax_mexicanus
ENSPPAG00000039677PABPC1L6776.842ENSBTAG00000016849PABPC1L8578.136Bos_taurus
ENSPPAG00000039677PABPC1L9974.830ENSBTAG00000050862-8177.703Bos_taurus
ENSPPAG00000039677PABPC1L5996.429ENSBTAG00000055300-10096.429Bos_taurus
ENSPPAG00000039677PABPC1L10096.906ENSCJAG00000017628PABPC1L10096.906Callithrix_jacchus
ENSPPAG00000039677PABPC1L6076.437ENSCJAG00000038506-10076.437Callithrix_jacchus
ENSPPAG00000039677PABPC1L9974.768ENSCAFG00000009573PABPC1L10074.501Canis_familiaris
ENSPPAG00000039677PABPC1L9987.869ENSCAFG00020013828PABPC1L9987.869Canis_lupus_dingo
ENSPPAG00000039677PABPC1L9786.789ENSCHIG00000025759PABPC1L9186.789Capra_hircus
ENSPPAG00000039677PABPC1L10087.948ENSTSYG00000006645PABPC1L10087.948Carlito_syrichta
ENSPPAG00000039677PABPC1L9980.510ENSCAPG00000014519PABPC1L10080.510Cavia_aperea
ENSPPAG00000039677PABPC1L10083.710ENSCPOG00000013633PABPC1L10083.710Cavia_porcellus
ENSPPAG00000039677PABPC1L10095.765ENSCCAG00000023338PABPC1L10095.765Cebus_capucinus
ENSPPAG00000039677PABPC1L10098.534ENSCATG00000034065PABPC1L10098.534Cercocebus_atys
ENSPPAG00000039677PABPC1L10081.774ENSCLAG00000005298PABPC1L10082.903Chinchilla_lanigera
ENSPPAG00000039677PABPC1L10098.371ENSCSAG00000014242PABPC1L10098.371Chlorocebus_sabaeus
ENSPPAG00000039677PABPC1L5478.788ENSCPBG00000007810-8178.788Chrysemys_picta_bellii
ENSPPAG00000039677PABPC1L10057.718ENSCPBG00000017765-7660.741Chrysemys_picta_bellii
ENSPPAG00000039677PABPC1L7281.982ENSCPBG00000017755-9981.982Chrysemys_picta_bellii
ENSPPAG00000039677PABPC1L9751.220ENSCING00000002796-9750.813Ciona_intestinalis
ENSPPAG00000039677PABPC1L9856.786ENSCSAVG00000003102-10081.507Ciona_savignyi
ENSPPAG00000039677PABPC1L9860.193ENSCSAVG00000004246-8978.313Ciona_savignyi
ENSPPAG00000039677PABPC1L10093.579ENSCANG00000037530PABPC1L10093.579Colobus_angolensis_palliatus
ENSPPAG00000039677PABPC1L9976.461ENSCGRG00001021938Pabpc1l9976.461Cricetulus_griseus_chok1gshd
ENSPPAG00000039677PABPC1L9976.461ENSCGRG00000007946Pabpc1l9976.461Cricetulus_griseus_crigri
ENSPPAG00000039677PABPC1L9865.563ENSCSEG00000021295pabpc1l9965.563Cynoglossus_semilaevis
ENSPPAG00000039677PABPC1L9969.305ENSCVAG00000015943-8685.496Cyprinodon_variegatus
ENSPPAG00000039677PABPC1L9969.984ENSDARG00000002597pabpc1l8886.154Danio_rerio
ENSPPAG00000039677PABPC1L9989.233ENSDNOG00000048450PABPC1L9989.233Dasypus_novemcinctus
ENSPPAG00000039677PABPC1L9985.784ENSDORG00000001067Pabpc1l9985.784Dipodomys_ordii
ENSPPAG00000039677PABPC1L9690.244ENSETEG00000009969PABPC1L7390.244Echinops_telfairi
ENSPPAG00000039677PABPC1L5187.879ENSEASG00005023407-6787.879Equus_asinus_asinus
ENSPPAG00000039677PABPC1L5995.238ENSEASG00005023408-10095.238Equus_asinus_asinus
ENSPPAG00000039677PABPC1L10076.510ENSEASG00005023406-8577.536Equus_asinus_asinus
ENSPPAG00000039677PABPC1L9976.190ENSECAG00000022681PABPC1L9376.282Equus_caballus
ENSPPAG00000039677PABPC1L6786.957ENSECAG00000040139-8286.957Equus_caballus
ENSPPAG00000039677PABPC1L10083.062ENSEEUG00000005978PABPC1L10083.062Erinaceus_europaeus
ENSPPAG00000039677PABPC1L9970.335ENSELUG00000001811pabpc1l9970.128Esox_lucius
ENSPPAG00000039677PABPC1L9988.689ENSFCAG00000011692PABPC1L9988.689Felis_catus
ENSPPAG00000039677PABPC1L8875.138ENSFALG00000005372PABPC1L9075.138Ficedula_albicollis
ENSPPAG00000039677PABPC1L10082.114ENSFDAG00000008291PABPC1L10082.114Fukomys_damarensis
ENSPPAG00000039677PABPC1L9970.358ENSFHEG00000003398pabpc1l9969.219Fundulus_heteroclitus
ENSPPAG00000039677PABPC1L9968.842ENSGMOG00000004437pabpc1l9868.842Gadus_morhua
ENSPPAG00000039677PABPC1L9771.306ENSGALG00000004123PABPC1L9983.453Gallus_gallus
ENSPPAG00000039677PABPC1L9966.308ENSGAFG00000021057pabpc1l9965.948Gambusia_affinis
ENSPPAG00000039677PABPC1L9967.628ENSGACG00000002792pabpc1l9967.468Gasterosteus_aculeatus
ENSPPAG00000039677PABPC1L9976.045ENSGAGG00000000589PABPC1L9584.262Gopherus_agassizii
ENSPPAG00000039677PABPC1L10099.511ENSGGOG00000004584PABPC1L10099.511Gorilla_gorilla
ENSPPAG00000039677PABPC1L9967.512ENSHBUG00000006134pabpc1l9967.512Haplochromis_burtoni
ENSPPAG00000039677PABPC1L10083.548ENSHGLG00000008434PABPC1L10083.548Heterocephalus_glaber_female
ENSPPAG00000039677PABPC1L10083.548ENSHGLG00100012151PABPC1L10083.548Heterocephalus_glaber_male
ENSPPAG00000039677PABPC1L5981.461ENSHGLG00100019506-10081.461Heterocephalus_glaber_male
ENSPPAG00000039677PABPC1L9967.657ENSHCOG00000009270pabpc1l9967.323Hippocampus_comes
ENSPPAG00000039677PABPC1L9971.040ENSIPUG00000012602pabpc1l9971.040Ictalurus_punctatus
ENSPPAG00000039677PABPC1L5961.494ENSIPUG00000006760-8861.494Ictalurus_punctatus
ENSPPAG00000039677PABPC1L6062.069ENSIPUG00000006780-8562.069Ictalurus_punctatus
ENSPPAG00000039677PABPC1L10088.274ENSSTOG00000003739PABPC1L10088.274Ictidomys_tridecemlineatus
ENSPPAG00000039677PABPC1L9967.636ENSJJAG00000022406Pabpc1l9963.961Jaculus_jaculus
ENSPPAG00000039677PABPC1L9969.628ENSKMAG00000016847pabpc1l9969.530Kryptolebias_marmoratus
ENSPPAG00000039677PABPC1L9967.192ENSLBEG00000010084pabpc1l9966.877Labrus_bergylta
ENSPPAG00000039677PABPC1L9969.952ENSLACG00000005762PABPC1L9971.324Latimeria_chalumnae
ENSPPAG00000039677PABPC1L9970.560ENSLOCG00000007519pabpc1l9870.513Lepisosteus_oculatus
ENSPPAG00000039677PABPC1L9984.776ENSLAFG00000003553PABPC1L10084.776Loxodonta_africana
ENSPPAG00000039677PABPC1L10098.697ENSMFAG00000040365PABPC1L10098.697Macaca_fascicularis
ENSPPAG00000039677PABPC1L10097.315ENSMMUG00000013209-10097.315Macaca_mulatta
ENSPPAG00000039677PABPC1L10095.786ENSMNEG00000032298PABPC1L10095.786Macaca_nemestrina
ENSPPAG00000039677PABPC1L10098.534ENSMLEG00000043139PABPC1L10098.534Mandrillus_leucophaeus
ENSPPAG00000039677PABPC1L9768.197ENSMAMG00000011854pabpc1l9768.144Mastacembelus_armatus
ENSPPAG00000039677PABPC1L9967.670ENSMZEG00005023713pabpc1l9967.670Maylandia_zebra
ENSPPAG00000039677PABPC1L9975.040ENSMGAG00000003674PABPC1L9875.040Meleagris_gallopavo
ENSPPAG00000039677PABPC1L10084.564ENSMICG00000000974-9286.131Microcebus_murinus
ENSPPAG00000039677PABPC1L9974.675ENSMOCG00000013186Pabpc1l9974.675Microtus_ochrogaster
ENSPPAG00000039677PABPC1L9967.680ENSMMOG00000020574-9086.154Mola_mola
ENSPPAG00000039677PABPC1L9779.833ENSMODG00000016198PABPC1L9979.667Monodelphis_domestica
ENSPPAG00000039677PABPC1L9766.613ENSMALG00000021622pabpc1l10066.396Monopterus_albus
ENSPPAG00000039677PABPC1L9976.797MGP_CAROLIEiJ_G0024627Pabpc1l9976.797Mus_caroli
ENSPPAG00000039677PABPC1L9976.634ENSMUSG00000054582Pabpc1l9976.634Mus_musculus
ENSPPAG00000039677PABPC1L9976.998MGP_PahariEiJ_G0026071Pabpc1l9976.998Mus_pahari
ENSPPAG00000039677PABPC1L9976.797MGP_SPRETEiJ_G0025549Pabpc1l9976.797Mus_spretus
ENSPPAG00000039677PABPC1L9986.201ENSMPUG00000017646PABPC1L9986.201Mustela_putorius_furo
ENSPPAG00000039677PABPC1L9879.032ENSMLUG00000006324PABPC1L9779.032Myotis_lucifugus
ENSPPAG00000039677PABPC1L9979.254ENSNGAG00000010458Pabpc1l9979.254Nannospalax_galili
ENSPPAG00000039677PABPC1L9872.902ENSNBRG00000016633pabpc1l9979.310Neolamprologus_brichardi
ENSPPAG00000039677PABPC1L9396.855ENSNLEG00000006653-9396.855Nomascus_leucogenys
ENSPPAG00000039677PABPC1L10068.567ENSMEUG00000007905-10068.567Notamacropus_eugenii
ENSPPAG00000039677PABPC1L10086.504ENSOPRG00000011846PABPC1L10086.504Ochotona_princeps
ENSPPAG00000039677PABPC1L10076.059ENSODEG00000015482PABPC1L10076.059Octodon_degus
ENSPPAG00000039677PABPC1L5874.375ENSODEG00000002920-9774.375Octodon_degus
ENSPPAG00000039677PABPC1L9967.453ENSONIG00000017314pabpc1l9967.670Oreochromis_niloticus
ENSPPAG00000039677PABPC1L8968.174ENSOANG00000015793-10068.174Ornithorhynchus_anatinus
ENSPPAG00000039677PABPC1L9980.247ENSOCUG00000003005PABPC1L10080.247Oryctolagus_cuniculus
ENSPPAG00000039677PABPC1L9772.066ENSORLG00000010322pabpc1l9972.902Oryzias_latipes
ENSPPAG00000039677PABPC1L9772.066ENSORLG00020021193pabpc1l9972.902Oryzias_latipes_hni
ENSPPAG00000039677PABPC1L9772.066ENSORLG00015017018pabpc1l9972.902Oryzias_latipes_hsok
ENSPPAG00000039677PABPC1L9964.679ENSOMEG00000010789pabpc1l9964.472Oryzias_melastigma
ENSPPAG00000039677PABPC1L9987.500ENSOGAG00000032999PABPC1L10087.500Otolemur_garnettii
ENSPPAG00000039677PABPC1L9987.213ENSOARG00000004578PABPC1L9987.213Ovis_aries
ENSPPAG00000039677PABPC1L9980.405ENSPPRG00000020242-9281.618Panthera_pardus
ENSPPAG00000039677PABPC1L6381.481ENSPPRG00000019327-9881.481Panthera_pardus
ENSPPAG00000039677PABPC1L9888.742ENSPTIG00000006524PABPC1L9988.742Panthera_tigris_altaica
ENSPPAG00000039677PABPC1L63100.000ENSPTRG00000013531PABPC1L99100.000Pan_troglodytes
ENSPPAG00000039677PABPC1L100100.000ENSPTRG00000044192-100100.000Pan_troglodytes
ENSPPAG00000039677PABPC1L10098.534ENSPANG00000018788PABPC1L10098.534Papio_anubis
ENSPPAG00000039677PABPC1L9971.429ENSPKIG00000007322pabpc1l9971.014Paramormyrops_kingsleyae
ENSPPAG00000039677PABPC1L5382.308ENSPKIG00000016810-9382.308Paramormyrops_kingsleyae
ENSPPAG00000039677PABPC1L6883.693ENSPSIG00000013289PABPC1L9983.693Pelodiscus_sinensis
ENSPPAG00000039677PABPC1L6179.070ENSPMGG00000023117pabpc1l9286.364Periophthalmus_magnuspinnatus
ENSPPAG00000039677PABPC1L7266.834ENSPMGG00000023121-9366.667Periophthalmus_magnuspinnatus
ENSPPAG00000039677PABPC1L9976.471ENSPEMG00000020671Pabpc1l9976.634Peromyscus_maniculatus_bairdii
ENSPPAG00000039677PABPC1L9969.692ENSPFOG00000013241pabpc1l9969.206Poecilia_formosa
ENSPPAG00000039677PABPC1L9969.417ENSPLAG00000017490-9969.368Poecilia_latipinna
ENSPPAG00000039677PABPC1L5386.260ENSPLAG00000023686-9286.260Poecilia_latipinna
ENSPPAG00000039677PABPC1L9969.481ENSPMEG00000007677pabpc1l9969.106Poecilia_mexicana
ENSPPAG00000039677PABPC1L5386.260ENSPMEG00000009185-8986.260Poecilia_mexicana
ENSPPAG00000039677PABPC1L6776.755ENSPREG00000015886pabpc1l9976.755Poecilia_reticulata
ENSPPAG00000039677PABPC1L5281.818ENSPREG00000015197-7380.000Poecilia_reticulata
ENSPPAG00000039677PABPC1L10099.023ENSPPYG00000011042PABPC1L10099.023Pongo_abelii
ENSPPAG00000039677PABPC1L6293.750ENSPCAG00000011787-7593.750Procavia_capensis
ENSPPAG00000039677PABPC1L9989.951ENSPCOG00000020630PABPC1L9989.951Propithecus_coquereli
ENSPPAG00000039677PABPC1L9985.738ENSPVAG00000012663PABPC1L9985.738Pteropus_vampyrus
ENSPPAG00000039677PABPC1L9872.902ENSPNYG00000004101pabpc1l9978.409Pundamilia_nyererei
ENSPPAG00000039677PABPC1L9964.000ENSPNAG00000021248pabpc1l9963.301Pygocentrus_nattereri
ENSPPAG00000039677PABPC1L9976.661ENSRNOG00000012750Pabpc1l10076.823Rattus_norvegicus
ENSPPAG00000039677PABPC1L10098.534ENSRBIG00000035381PABPC1L10098.534Rhinopithecus_bieti
ENSPPAG00000039677PABPC1L10098.371ENSRROG00000044498PABPC1L10098.371Rhinopithecus_roxellana
ENSPPAG00000039677PABPC1L10095.928ENSSBOG00000009532-10095.928Saimiri_boliviensis_boliviensis
ENSPPAG00000039677PABPC1L9876.190ENSSBOG00000020828-9277.564Saimiri_boliviensis_boliviensis
ENSPPAG00000039677PABPC1L9774.029ENSSHAG00000011446PABPC1L10074.029Sarcophilus_harrisii
ENSPPAG00000039677PABPC1L9971.635ENSSFOG00015017304pabpc1l9971.268Scleropages_formosus
ENSPPAG00000039677PABPC1L9968.058ENSSMAG00000010516pabpc1l9887.597Scophthalmus_maximus
ENSPPAG00000039677PABPC1L9968.304ENSSDUG00000014743pabpc1l9968.304Seriola_dumerili
ENSPPAG00000039677PABPC1L9873.861ENSSLDG00000006981pabpc1l9577.169Seriola_lalandi_dorsalis
ENSPPAG00000039677PABPC1L9974.157ENSSPUG00000004233PABPC1L9874.157Sphenodon_punctatus
ENSPPAG00000039677PABPC1L9965.239ENSSPAG00000017137pabpc1l9963.921Stegastes_partitus
ENSPPAG00000039677PABPC1L9986.513ENSSSCG00000007382PABPC1L9986.513Sus_scrofa
ENSPPAG00000039677PABPC1L9974.528ENSTGUG00000005114PABPC1L9974.528Taeniopygia_guttata
ENSPPAG00000039677PABPC1L9767.208ENSTRUG00000011085pabpc1l9767.208Takifugu_rubripes
ENSPPAG00000039677PABPC1L9966.134ENSTNIG00000017903pabpc1l9866.134Tetraodon_nigroviridis
ENSPPAG00000039677PABPC1L9493.836ENSTBEG00000002851PABPC1L8093.836Tupaia_belangeri
ENSPPAG00000039677PABPC1L9486.111ENSTTRG00000007618PABPC1L10086.149Tursiops_truncatus
ENSPPAG00000039677PABPC1L9985.502ENSUAMG00000017682PABPC1L9985.502Ursus_americanus
ENSPPAG00000039677PABPC1L6789.973ENSUMAG00000025436PABPC1L9489.973Ursus_maritimus
ENSPPAG00000039677PABPC1L9892.490ENSVVUG00000018939PABPC1L9992.490Vulpes_vulpes
ENSPPAG00000039677PABPC1L9970.192ENSXETG00000022831pabpc1l9870.209Xenopus_tropicalis
ENSPPAG00000039677PABPC1L9772.706ENSXCOG00000005459pabpc1l9982.270Xiphophorus_couchianus
ENSPPAG00000039677PABPC1L9969.741ENSXMAG00000017135pabpc1l9969.368Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us