EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSPPAG00000039680 (Gene tree)
Gene ID
100980865
Gene Symbol
RPA1
Alias
-
Full Name
replication protein A1
Gene Type
protein_coding
Species
Pan_paniscus
Status
putative
Strand
Plus strand
Length
70217 bases
Position
chr17:1705380-1775596
Accession
100980865
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPPAP00000033667tRNA_anti-codonPF01336.255.7e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPPAT00000056543RPA1-2012859XM_003816854ENSPPAP00000033667616 (aa)XP_003816902A0A2R9BVF9
Gene Model
Click here to download ENSPPAG00000039680's gene model file
Pathways
Pathway IDPathway NameSource
pps03030DNA replicationKEGG
pps03420Nucleotide excision repairKEGG
pps03430Mismatch repairKEGG
pps03440Homologous recombinationKEGG
pps03460Fanconi anemia pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000039680's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPPAG00000039680RPA19063.761ENSAPOG00000019409RPA18063.761Acanthochromis_polyacanthus
ENSPPAG00000039680RPA19963.458ENSAPOG00000011658rpa19963.458Acanthochromis_polyacanthus
ENSPPAG00000039680RPA19988.342ENSAMEG00000007706RPA19888.342Ailuropoda_melanoleuca
ENSPPAG00000039680RPA19558.913ENSACIG00000012881RPA19958.913Amphilophus_citrinellus
ENSPPAG00000039680RPA19558.136ENSACIG00000007277rpa19958.206Amphilophus_citrinellus
ENSPPAG00000039680RPA19954.992ENSAOCG00000009003RPA19954.992Amphiprion_ocellaris
ENSPPAG00000039680RPA19963.192ENSAOCG00000023376rpa19963.103Amphiprion_ocellaris
ENSPPAG00000039680RPA19963.029ENSAPEG00000008634rpa19962.931Amphiprion_percula
ENSPPAG00000039680RPA19953.904ENSAPEG00000019132RPA19953.754Amphiprion_percula
ENSPPAG00000039680RPA19464.433ENSATEG00000022024rpa19964.261Anabas_testudineus
ENSPPAG00000039680RPA19954.977ENSATEG00000006443RPA19953.752Anabas_testudineus
ENSPPAG00000039680RPA19864.749ENSAPLG00000012442RPA110064.749Anas_platyrhynchos
ENSPPAG00000039680RPA19963.328ENSACAG00000014490RPA19963.446Anolis_carolinensis
ENSPPAG00000039680RPA19894.868ENSANAG00000023456RPA110094.362Aotus_nancymaae
ENSPPAG00000039680RPA19957.524ENSACLG00000005223RPA19957.524Astatotilapia_calliptera
ENSPPAG00000039680RPA19363.937ENSACLG00000006640rpa19963.589Astatotilapia_calliptera
ENSPPAG00000039680RPA19961.564ENSAMXG00000008418rpa19962.439Astyanax_mexicanus
ENSPPAG00000039680RPA110089.773ENSBTAG00000009711RPA110089.773Bos_taurus
ENSPPAG00000039680RPA17830.675WBGene00017546rpa-17130.867Caenorhabditis_elegans
ENSPPAG00000039680RPA110093.831ENSCJAG00000001848RPA110093.831Callithrix_jacchus
ENSPPAG00000039680RPA110088.655ENSCAFG00000019249RPA110088.149Canis_familiaris
ENSPPAG00000039680RPA110088.655ENSCAFG00020009847RPA110088.149Canis_lupus_dingo
ENSPPAG00000039680RPA110090.422ENSCHIG00000026308RPA110090.422Capra_hircus
ENSPPAG00000039680RPA110092.058ENSTSYG00000003482-10091.248Carlito_syrichta
ENSPPAG00000039680RPA110088.474ENSCPOG00000000035RPA110088.474Cavia_porcellus
ENSPPAG00000039680RPA110083.468ENSCCAG00000010981RPA110083.468Cebus_capucinus
ENSPPAG00000039680RPA110084.578ENSCLAG00000015045-10084.578Chinchilla_lanigera
ENSPPAG00000039680RPA19989.756ENSCLAG00000005185-9989.251Chinchilla_lanigera
ENSPPAG00000039680RPA110084.765ENSCSAG00000013833RPA110084.765Chlorocebus_sabaeus
ENSPPAG00000039680RPA17192.255ENSCHOG00000009454-10092.255Choloepus_hoffmanni
ENSPPAG00000039680RPA19586.565ENSCHOG00000013540-10086.565Choloepus_hoffmanni
ENSPPAG00000039680RPA19976.911ENSCPBG00000020377RPA19976.667Chrysemys_picta_bellii
ENSPPAG00000039680RPA19942.557ENSCING00000023482-9842.553Ciona_intestinalis
ENSPPAG00000039680RPA19891.570ENSCANG00000030911RPA110091.570Colobus_angolensis_palliatus
ENSPPAG00000039680RPA19987.399ENSCGRG00001008197Rpa19987.055Cricetulus_griseus_chok1gshd
ENSPPAG00000039680RPA18186.220ENSCGRG00000000582Rpa19985.799Cricetulus_griseus_crigri
ENSPPAG00000039680RPA19960.784ENSCSEG00000013066rpa19960.621Cynoglossus_semilaevis
ENSPPAG00000039680RPA19952.866ENSCSEG00000012726RPA19852.811Cynoglossus_semilaevis
ENSPPAG00000039680RPA19653.005ENSCVAG00000013446-9653.005Cyprinodon_variegatus
ENSPPAG00000039680RPA19963.889ENSCVAG00000019431rpa19964.789Cyprinodon_variegatus
ENSPPAG00000039680RPA19963.415ENSDARG00000003938rpa19963.415Danio_rerio
ENSPPAG00000039680RPA19988.962ENSDNOG00000017218RPA19988.962Dasypus_novemcinctus
ENSPPAG00000039680RPA110089.448ENSDORG00000006199Rpa110089.448Dipodomys_ordii
ENSPPAG00000039680RPA19941.842FBgn0010173RpA-709842.165Drosophila_melanogaster
ENSPPAG00000039680RPA18382.367ENSETEG00000017608RPA18282.367Echinops_telfairi
ENSPPAG00000039680RPA19890.381ENSEASG00005009372RPA110087.884Equus_asinus_asinus
ENSPPAG00000039680RPA110090.600ENSECAG00000023886RPA110090.097Equus_caballus
ENSPPAG00000039680RPA16890.000ENSEEUG00000002186-6890.000Erinaceus_europaeus
ENSPPAG00000039680RPA19961.974ENSELUG00000021071rpa19961.812Esox_lucius
ENSPPAG00000039680RPA18856.906ENSELUG00000006136RPA19956.906Esox_lucius
ENSPPAG00000039680RPA110087.702ENSFCAG00000006306RPA19987.034Felis_catus
ENSPPAG00000039680RPA110074.313ENSFALG00000006575RPA19973.990Ficedula_albicollis
ENSPPAG00000039680RPA19989.414ENSFDAG00000007720RPA19989.414Fukomys_damarensis
ENSPPAG00000039680RPA19962.007ENSFHEG00000003580rpa19961.803Fundulus_heteroclitus
ENSPPAG00000039680RPA19959.150ENSGMOG00000010382rpa19959.150Gadus_morhua
ENSPPAG00000039680RPA110074.392ENSGALG00000003072RPA19974.230Gallus_gallus
ENSPPAG00000039680RPA19954.932ENSGAFG00000020953RPA19955.083Gambusia_affinis
ENSPPAG00000039680RPA19963.262ENSGAFG00000012916rpa19963.235Gambusia_affinis
ENSPPAG00000039680RPA19961.401ENSGACG00000010856rpa19960.912Gasterosteus_aculeatus
ENSPPAG00000039680RPA19976.911ENSGAGG00000013611RPA19976.098Gopherus_agassizii
ENSPPAG00000039680RPA110093.994ENSGGOG00000014186RPA110093.994Gorilla_gorilla
ENSPPAG00000039680RPA19963.132ENSHBUG00000017773rpa19963.192Haplochromis_burtoni
ENSPPAG00000039680RPA19654.195ENSHBUG00000009348RPA19954.195Haplochromis_burtoni
ENSPPAG00000039680RPA19989.251ENSHGLG00000008846RPA110089.251Heterocephalus_glaber_female
ENSPPAG00000039680RPA19989.251ENSHGLG00100017755-10089.251Heterocephalus_glaber_male
ENSPPAG00000039680RPA110084.578ENSHGLG00100000799-10084.578Heterocephalus_glaber_male
ENSPPAG00000039680RPA110076.136ENSHGLG00100002005-10076.136Heterocephalus_glaber_male
ENSPPAG00000039680RPA19961.750ENSHCOG00000001401rpa19961.564Hippocampus_comes
ENSPPAG00000039680RPA19944.318ENSHCOG00000000351RPA19944.265Hippocampus_comes
ENSPPAG00000039680RPA19963.269ENSIPUG00000004400rpa19963.107Ictalurus_punctatus
ENSPPAG00000039680RPA19882.730ENSSTOG00000022475RPA19882.730Ictidomys_tridecemlineatus
ENSPPAG00000039680RPA19590.323ENSJJAG00000000876Rpa19889.626Jaculus_jaculus
ENSPPAG00000039680RPA19962.643ENSKMAG00000005605rpa19962.643Kryptolebias_marmoratus
ENSPPAG00000039680RPA19955.466ENSKMAG00000000234RPA19954.808Kryptolebias_marmoratus
ENSPPAG00000039680RPA19863.554ENSLBEG00000002281RPA18063.554Labrus_bergylta
ENSPPAG00000039680RPA19962.153ENSLBEG00000021604rpa19962.052Labrus_bergylta
ENSPPAG00000039680RPA18067.677ENSLACG00000007210RPA19668.842Latimeria_chalumnae
ENSPPAG00000039680RPA19967.752ENSLOCG00000006397rpa19967.264Lepisosteus_oculatus
ENSPPAG00000039680RPA19987.762ENSLAFG00000015354RPA19987.097Loxodonta_africana
ENSPPAG00000039680RPA18296.047ENSMFAG00000036138-10096.047Macaca_fascicularis
ENSPPAG00000039680RPA110088.636ENSMMUG00000002442-10088.636Macaca_mulatta
ENSPPAG00000039680RPA19896.529ENSMMUG00000011604-10096.529Macaca_mulatta
ENSPPAG00000039680RPA110093.831ENSMNEG00000031632-10093.831Macaca_nemestrina
ENSPPAG00000039680RPA18991.332ENSMNEG00000029837-10091.332Macaca_nemestrina
ENSPPAG00000039680RPA19890.445ENSMLEG00000038768-10090.445Mandrillus_leucophaeus
ENSPPAG00000039680RPA19963.622ENSMAMG00000017993rpa19963.518Mastacembelus_armatus
ENSPPAG00000039680RPA19953.116ENSMAMG00000020097RPA19162.054Mastacembelus_armatus
ENSPPAG00000039680RPA19957.524ENSMZEG00005024731RPA19957.524Maylandia_zebra
ENSPPAG00000039680RPA19963.132ENSMZEG00005007551rpa19963.192Maylandia_zebra
ENSPPAG00000039680RPA19973.934ENSMGAG00000005315RPA19873.770Meleagris_gallopavo
ENSPPAG00000039680RPA19788.333ENSMAUG00000010474Rpa19988.333Mesocricetus_auratus
ENSPPAG00000039680RPA110090.762ENSMICG00000012867RPA110090.260Microcebus_murinus
ENSPPAG00000039680RPA19987.785ENSMOCG00000013019Rpa19987.276Microtus_ochrogaster
ENSPPAG00000039680RPA19961.538ENSMMOG00000014292rpa19962.775Mola_mola
ENSPPAG00000039680RPA19756.427ENSMMOG00000010868RPA19756.427Mola_mola
ENSPPAG00000039680RPA19983.740ENSMODG00000010549RPA19983.225Monodelphis_domestica
ENSPPAG00000039680RPA19964.426ENSMALG00000011453rpa19964.157Monopterus_albus
ENSPPAG00000039680RPA19462.557ENSMALG00000001208RPA17762.557Monopterus_albus
ENSPPAG00000039680RPA19986.386MGP_CAROLIEiJ_G0016734Rpa19985.714Mus_caroli
ENSPPAG00000039680RPA19984.270ENSMUSG00000000751Rpa19983.601Mus_musculus
ENSPPAG00000039680RPA19987.258MGP_PahariEiJ_G0017871Rpa19986.753Mus_pahari
ENSPPAG00000039680RPA19984.295MGP_SPRETEiJ_G0017577Rpa19983.467Mus_spretus
ENSPPAG00000039680RPA110087.662ENSMPUG00000013119RPA110087.662Mustela_putorius_furo
ENSPPAG00000039680RPA110086.013ENSMLUG00000006113RPA110085.507Myotis_lucifugus
ENSPPAG00000039680RPA19985.434ENSNGAG00000004522Rpa19785.434Nannospalax_galili
ENSPPAG00000039680RPA19756.667ENSNBRG00000009672RPA19655.760Neolamprologus_brichardi
ENSPPAG00000039680RPA19463.731ENSNBRG00000020595rpa19963.385Neolamprologus_brichardi
ENSPPAG00000039680RPA110097.565ENSNLEG00000017149RPA110097.565Nomascus_leucogenys
ENSPPAG00000039680RPA19872.591ENSMEUG00000006714RPA19972.591Notamacropus_eugenii
ENSPPAG00000039680RPA19587.458ENSODEG00000009038RPA19687.102Octodon_degus
ENSPPAG00000039680RPA19963.328ENSONIG00000013135rpa19963.344Oreochromis_niloticus
ENSPPAG00000039680RPA19882.255ENSOANG00000010880RPA19981.728Ornithorhynchus_anatinus
ENSPPAG00000039680RPA110085.449ENSOCUG00000001504RPA110085.449Oryctolagus_cuniculus
ENSPPAG00000039680RPA19963.622ENSORLG00000004856rpa19962.927Oryzias_latipes
ENSPPAG00000039680RPA19953.951ENSORLG00000003368RPA18464.384Oryzias_latipes
ENSPPAG00000039680RPA19963.235ENSORLG00020008980rpa19963.089Oryzias_latipes_hni
ENSPPAG00000039680RPA19952.030ENSORLG00020015284RPA18363.699Oryzias_latipes_hni
ENSPPAG00000039680RPA19954.348ENSORLG00015020383RPA19953.894Oryzias_latipes_hsok
ENSPPAG00000039680RPA16663.054ENSORLG00015005867-9760.981Oryzias_latipes_hsok
ENSPPAG00000039680RPA19963.235ENSORLG00015013982rpa19963.089Oryzias_latipes_hsok
ENSPPAG00000039680RPA19961.726ENSOMEG00000004704rpa19961.264Oryzias_melastigma
ENSPPAG00000039680RPA19654.992ENSOMEG00000011040RPA19956.873Oryzias_melastigma
ENSPPAG00000039680RPA19487.413ENSOGAG00000029379-10085.965Otolemur_garnettii
ENSPPAG00000039680RPA110090.113ENSOGAG00000005581-10089.448Otolemur_garnettii
ENSPPAG00000039680RPA110090.260ENSOARG00000014479RPA110090.260Ovis_aries
ENSPPAG00000039680RPA110087.379ENSPPRG00000011807RPA19986.710Panthera_pardus
ENSPPAG00000039680RPA110087.217ENSPTIG00000007898RPA19986.548Panthera_tigris_altaica
ENSPPAG00000039680RPA110099.513ENSPTRG00000008539RPA110099.513Pan_troglodytes
ENSPPAG00000039680RPA110096.753ENSPANG00000024592RPA110096.753Papio_anubis
ENSPPAG00000039680RPA19462.779ENSPKIG00000008053rpa19462.779Paramormyrops_kingsleyae
ENSPPAG00000039680RPA19776.167ENSPSIG00000015617RPA19975.833Pelodiscus_sinensis
ENSPPAG00000039680RPA19960.848ENSPMGG00000011589rpa19960.848Periophthalmus_magnuspinnatus
ENSPPAG00000039680RPA19954.369ENSPMGG00000000543RPA19955.789Periophthalmus_magnuspinnatus
ENSPPAG00000039680RPA19988.436ENSPEMG00000021061Rpa19987.765Peromyscus_maniculatus_bairdii
ENSPPAG00000039680RPA19982.439ENSPCIG00000019049RPA19982.276Phascolarctos_cinereus
ENSPPAG00000039680RPA19963.889ENSPFOG00000003987rpa19963.458Poecilia_formosa
ENSPPAG00000039680RPA19454.750ENSPLAG00000008844-9754.750Poecilia_latipinna
ENSPPAG00000039680RPA19963.770ENSPLAG00000004984rpa19963.666Poecilia_latipinna
ENSPPAG00000039680RPA19455.395ENSPMEG00000003627-9755.233Poecilia_mexicana
ENSPPAG00000039680RPA19963.889ENSPMEG00000020602rpa19964.021Poecilia_mexicana
ENSPPAG00000039680RPA19958.893ENSPREG00000010119RPA19661.571Poecilia_reticulata
ENSPPAG00000039680RPA19455.993ENSPREG00000010174rpa19655.726Poecilia_reticulata
ENSPPAG00000039680RPA110091.086ENSPCOG00000001799RPA110090.584Propithecus_coquereli
ENSPPAG00000039680RPA110089.303ENSPVAG00000002149RPA110088.799Pteropus_vampyrus
ENSPPAG00000039680RPA19963.295ENSPNYG00000016316rpa19963.542Pundamilia_nyererei
ENSPPAG00000039680RPA19957.210ENSPNYG00000024165RPA19957.210Pundamilia_nyererei
ENSPPAG00000039680RPA19855.648ENSPNAG00000008599rpa19954.019Pygocentrus_nattereri
ENSPPAG00000039680RPA19987.439ENSRNOG00000003123Rpa19987.439Rattus_norvegicus
ENSPPAG00000039680RPA110094.968ENSRBIG00000036587RPA110094.968Rhinopithecus_bieti
ENSPPAG00000039680RPA110089.448ENSRROG00000043278RPA110089.448Rhinopithecus_roxellana
ENSPPAG00000039680RPA19932.000YAR007CRFA19932.000Saccharomyces_cerevisiae
ENSPPAG00000039680RPA19890.397ENSSBOG00000030233RPA19990.397Saimiri_boliviensis_boliviensis
ENSPPAG00000039680RPA19982.651ENSSHAG00000007969RPA19882.623Sarcophilus_harrisii
ENSPPAG00000039680RPA19966.069ENSSFOG00015005362rpa19265.686Scleropages_formosus
ENSPPAG00000039680RPA19953.111ENSSMAG00000019746RPA19951.584Scophthalmus_maximus
ENSPPAG00000039680RPA19165.820ENSSDUG00000016358RPA18365.306Seriola_dumerili
ENSPPAG00000039680RPA19963.785ENSSDUG00000011949rpa19963.844Seriola_dumerili
ENSPPAG00000039680RPA19964.111ENSSLDG00000011806rpa19964.169Seriola_lalandi_dorsalis
ENSPPAG00000039680RPA19065.661ENSSLDG00000020784RPA18265.148Seriola_lalandi_dorsalis
ENSPPAG00000039680RPA18882.353ENSSARG00000007506RPA18982.353Sorex_araneus
ENSPPAG00000039680RPA19672.559ENSSPUG00000007223RPA19872.054Sphenodon_punctatus
ENSPPAG00000039680RPA19963.132ENSSPAG00000009903rpa19963.029Stegastes_partitus
ENSPPAG00000039680RPA19757.190ENSSPAG00000011165RPA19758.532Stegastes_partitus
ENSPPAG00000039680RPA19889.552ENSSSCG00000017822RPA110089.552Sus_scrofa
ENSPPAG00000039680RPA110073.906ENSTGUG00000005775RPA19973.744Taeniopygia_guttata
ENSPPAG00000039680RPA19955.725ENSTRUG00000000405RPA17763.014Takifugu_rubripes
ENSPPAG00000039680RPA19963.607ENSTRUG00000003616rpa19963.607Takifugu_rubripes
ENSPPAG00000039680RPA19964.136ENSTNIG00000016199rpa19964.065Tetraodon_nigroviridis
ENSPPAG00000039680RPA18795.349ENSTBEG00000002709RPA18195.349Tupaia_belangeri
ENSPPAG00000039680RPA19988.274ENSTTRG00000001169RPA19988.274Tursiops_truncatus
ENSPPAG00000039680RPA18891.489ENSUAMG00000015676RPA19989.017Ursus_americanus
ENSPPAG00000039680RPA110088.799ENSUMAG00000009328RPA110088.799Ursus_maritimus
ENSPPAG00000039680RPA110087.662ENSVPAG00000009443RPA110087.662Vicugna_pacos
ENSPPAG00000039680RPA110088.474ENSVVUG00000021715RPA110088.474Vulpes_vulpes
ENSPPAG00000039680RPA19973.115ENSXETG00000013538rpa19974.426Xenopus_tropicalis
ENSPPAG00000039680RPA19556.485ENSXCOG00000009899-9956.314Xiphophorus_couchianus
ENSPPAG00000039680RPA19361.257ENSXCOG00000010068rpa19462.298Xiphophorus_couchianus
ENSPPAG00000039680RPA19962.418ENSXMAG00000004102rpa19963.684Xiphophorus_maculatus
ENSPPAG00000039680RPA19664.172ENSXMAG00000010333RPA18564.172Xiphophorus_maculatus

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