EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPAG00000039826 (Gene tree)
Gene ID: 103786608
Gene Symbol: SCAF8
Alias: -
Full Name: SR-related CTD associated factor 8
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Plus strand
Length: 100143 bases
Position: chr6:158514265-158614407
Accession: 103786608
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000034066	RRM_1	PF00076.22	2.5e-09	1	1
ENSPPAP00000034055	RRM_1	PF00076.22	2.5e-09	1	1
ENSPPAP00000034071	RRM_1	PF00076.22	2.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000056936	SCAF8-201	4966	XM_008975034	ENSPPAP00000034055	1271 (aa)	XP_008973282	A0A2R9BZY1
ENSPPAT00000056952	SCAF8-203	3930	-	ENSPPAP00000034071	1309 (aa)	-	A0A2R9BX77
ENSPPAT00000056947	SCAF8-202	3804	-	ENSPPAP00000034066	1267 (aa)	-	A0A2R9BX73

Gene Model

Click here to download ENSPPAG00000039826's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000039826's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000039826	SCAF8	100	99.843	ENSG00000213079	SCAF8	100	99.843	Homo_sapiens
ENSPPAG00000039826	SCAF8	87	68.825	ENSAPOG00000015527	SCAF8	77	68.465	Acanthochromis_polyacanthus
ENSPPAG00000039826	SCAF8	99	96.431	ENSAMEG00000007583	SCAF8	97	94.814	Ailuropoda_melanoleuca
ENSPPAG00000039826	SCAF8	87	68.825	ENSAOCG00000002421	SCAF8	76	68.465	Amphiprion_ocellaris
ENSPPAG00000039826	SCAF8	88	65.745	ENSATEG00000006959	SCAF8	97	65.102	Anabas_testudineus
ENSPPAG00000039826	SCAF8	100	79.423	ENSAPLG00000005765	SCAF8	100	79.423	Anas_platyrhynchos
ENSPPAG00000039826	SCAF8	99	74.508	ENSACAG00000005282	SCAF8	99	74.430	Anolis_carolinensis
ENSPPAG00000039826	SCAF8	100	98.662	ENSANAG00000036184	SCAF8	100	98.662	Aotus_nancymaae
ENSPPAG00000039826	SCAF8	86	69.184	ENSACLG00000018828	SCAF8	80	68.780	Astatotilapia_calliptera
ENSPPAG00000039826	SCAF8	100	95.122	ENSBTAG00000031917	SCAF8	100	95.122	Bos_taurus
ENSPPAG00000039826	SCAF8	100	98.190	ENSCJAG00000012631	SCAF8	97	96.594	Callithrix_jacchus
ENSPPAG00000039826	SCAF8	99	96.355	ENSCAFG00000000570	SCAF8	99	96.355	Canis_familiaris
ENSPPAG00000039826	SCAF8	99	96.282	ENSCAFG00020015048	SCAF8	99	96.212	Canis_lupus_dingo
ENSPPAG00000039826	SCAF8	100	95.201	ENSCHIG00000025041	SCAF8	100	95.201	Capra_hircus
ENSPPAG00000039826	SCAF8	99	97.066	ENSTSYG00000010991	SCAF8	97	97.066	Carlito_syrichta
ENSPPAG00000039826	SCAF8	79	70.370	ENSCAPG00000003300	SCAF8	85	98.684	Cavia_aperea
ENSPPAG00000039826	SCAF8	99	87.994	ENSCPOG00000022216	-	99	87.204	Cavia_porcellus
ENSPPAG00000039826	SCAF8	100	98.190	ENSCCAG00000024952	SCAF8	100	98.190	Cebus_capucinus
ENSPPAG00000039826	SCAF8	100	99.056	ENSCATG00000035361	SCAF8	100	99.056	Cercocebus_atys
ENSPPAG00000039826	SCAF8	100	94.953	ENSCLAG00000004910	SCAF8	100	95.404	Chinchilla_lanigera
ENSPPAG00000039826	SCAF8	99	99.207	ENSCSAG00000013430	SCAF8	100	97.601	Chlorocebus_sabaeus
ENSPPAG00000039826	SCAF8	100	76.029	ENSCPBG00000016330	SCAF8	99	80.241	Chrysemys_picta_bellii
ENSPPAG00000039826	SCAF8	100	98.977	ENSCANG00000039499	SCAF8	99	98.969	Colobus_angolensis_palliatus
ENSPPAG00000039826	SCAF8	100	91.903	ENSCGRG00001020167	Scaf8	100	91.903	Cricetulus_griseus_chok1gshd
ENSPPAG00000039826	SCAF8	99	91.838	ENSCGRG00000004120	Scaf8	99	91.766	Cricetulus_griseus_crigri
ENSPPAG00000039826	SCAF8	87	66.145	ENSCSEG00000000043	-	78	67.349	Cynoglossus_semilaevis
ENSPPAG00000039826	SCAF8	82	67.104	ENSCVAG00000000925	SCAF8	77	66.710	Cyprinodon_variegatus
ENSPPAG00000039826	SCAF8	96	89.992	ENSDNOG00000025271	SCAF8	100	93.601	Dasypus_novemcinctus
ENSPPAG00000039826	SCAF8	99	93.592	ENSDORG00000006391	Scaf8	100	93.375	Dipodomys_ordii
ENSPPAG00000039826	SCAF8	100	96.462	ENSEASG00005018879	SCAF8	100	96.462	Equus_asinus_asinus
ENSPPAG00000039826	SCAF8	100	96.617	ENSECAG00000005540	SCAF8	100	96.617	Equus_caballus
ENSPPAG00000039826	SCAF8	88	65.000	ENSELUG00000002779	SCAF8	75	64.988	Esox_lucius
ENSPPAG00000039826	SCAF8	100	97.089	ENSFCAG00000023424	SCAF8	100	97.089	Felis_catus
ENSPPAG00000039826	SCAF8	100	78.816	ENSFALG00000012433	SCAF8	100	79.066	Ficedula_albicollis
ENSPPAG00000039826	SCAF8	99	95.800	ENSFDAG00000010335	SCAF8	99	95.800	Fukomys_damarensis
ENSPPAG00000039826	SCAF8	92	68.804	ENSFHEG00000008284	SCAF8	77	68.434	Fundulus_heteroclitus
ENSPPAG00000039826	SCAF8	60	68.594	ENSGMOG00000018812	SCAF8	77	61.164	Gadus_morhua
ENSPPAG00000039826	SCAF8	100	80.250	ENSGALG00000013635	SCAF8	99	79.439	Gallus_gallus
ENSPPAG00000039826	SCAF8	85	68.550	ENSGAFG00000018033	SCAF8	78	65.233	Gambusia_affinis
ENSPPAG00000039826	SCAF8	93	54.160	ENSGACG00000006909	SCAF8	100	55.139	Gasterosteus_aculeatus
ENSPPAG00000039826	SCAF8	63	72.660	ENSGAGG00000017820	-	88	73.153	Gopherus_agassizii
ENSPPAG00000039826	SCAF8	100	99.685	ENSGGOG00000008645	SCAF8	100	99.685	Gorilla_gorilla
ENSPPAG00000039826	SCAF8	86	69.062	ENSHBUG00000019537	SCAF8	80	68.659	Haplochromis_burtoni
ENSPPAG00000039826	SCAF8	100	95.440	ENSHGLG00000003619	SCAF8	100	95.440	Heterocephalus_glaber_female
ENSPPAG00000039826	SCAF8	100	94.811	ENSHGLG00100004708	SCAF8	100	95.404	Heterocephalus_glaber_male
ENSPPAG00000039826	SCAF8	99	96.513	ENSSTOG00000026043	SCAF8	99	96.513	Ictidomys_tridecemlineatus
ENSPPAG00000039826	SCAF8	100	92.846	ENSJJAG00000020480	Scaf8	100	92.846	Jaculus_jaculus
ENSPPAG00000039826	SCAF8	87	68.351	ENSKMAG00000012767	SCAF8	78	67.990	Kryptolebias_marmoratus
ENSPPAG00000039826	SCAF8	63	76.296	ENSLBEG00000012484	-	59	76.429	Labrus_bergylta
ENSPPAG00000039826	SCAF8	88	76.074	ENSLACG00000001394	SCAF8	99	63.078	Latimeria_chalumnae
ENSPPAG00000039826	SCAF8	100	61.611	ENSLOCG00000016856	SCAF8	100	60.751	Lepisosteus_oculatus
ENSPPAG00000039826	SCAF8	100	93.637	ENSLAFG00000000022	SCAF8	100	94.187	Loxodonta_africana
ENSPPAG00000039826	SCAF8	100	99.213	ENSMFAG00000032738	SCAF8	100	99.213	Macaca_fascicularis
ENSPPAG00000039826	SCAF8	100	99.213	ENSMMUG00000015163	SCAF8	100	99.213	Macaca_mulatta
ENSPPAG00000039826	SCAF8	100	99.213	ENSMNEG00000043466	SCAF8	100	99.213	Macaca_nemestrina
ENSPPAG00000039826	SCAF8	99	99.048	ENSMLEG00000034845	SCAF8	99	99.048	Mandrillus_leucophaeus
ENSPPAG00000039826	SCAF8	83	65.478	ENSMAMG00000009457	SCAF8	76	64.586	Mastacembelus_armatus
ENSPPAG00000039826	SCAF8	86	69.062	ENSMZEG00005005698	SCAF8	80	68.659	Maylandia_zebra
ENSPPAG00000039826	SCAF8	99	80.016	ENSMGAG00000012762	SCAF8	100	79.627	Meleagris_gallopavo
ENSPPAG00000039826	SCAF8	99	91.363	ENSMAUG00000009513	Scaf8	100	91.363	Mesocricetus_auratus
ENSPPAG00000039826	SCAF8	100	96.226	ENSMICG00000028965	SCAF8	100	96.226	Microcebus_murinus
ENSPPAG00000039826	SCAF8	100	92.374	ENSMOCG00000014950	Scaf8	100	92.374	Microtus_ochrogaster
ENSPPAG00000039826	SCAF8	84	65.228	ENSMMOG00000002216	SCAF8	78	63.041	Mola_mola
ENSPPAG00000039826	SCAF8	99	86.857	ENSMODG00000008301	SCAF8	99	86.857	Monodelphis_domestica
ENSPPAG00000039826	SCAF8	87	67.866	ENSMALG00000011584	SCAF8	78	68.402	Monopterus_albus
ENSPPAG00000039826	SCAF8	100	91.188	MGP_CAROLIEiJ_G0021016	Scaf8	100	91.188	Mus_caroli
ENSPPAG00000039826	SCAF8	100	91.267	ENSMUSG00000046201	Scaf8	100	91.267	Mus_musculus
ENSPPAG00000039826	SCAF8	100	91.975	MGP_PahariEiJ_G0023334	Scaf8	100	91.975	Mus_pahari
ENSPPAG00000039826	SCAF8	99	96.035	ENSMPUG00000001974	SCAF8	100	94.505	Mustela_putorius_furo
ENSPPAG00000039826	SCAF8	100	93.627	ENSMLUG00000029190	SCAF8	100	93.627	Myotis_lucifugus
ENSPPAG00000039826	SCAF8	100	93.003	ENSNGAG00000012332	Scaf8	100	93.003	Nannospalax_galili
ENSPPAG00000039826	SCAF8	100	52.887	ENSNBRG00000009067	SCAF8	100	52.823	Neolamprologus_brichardi
ENSPPAG00000039826	SCAF8	100	98.352	ENSNLEG00000015509	SCAF8	99	99.604	Nomascus_leucogenys
ENSPPAG00000039826	SCAF8	70	92.762	ENSOPRG00000018413	-	76	92.929	Ochotona_princeps
ENSPPAG00000039826	SCAF8	100	95.522	ENSODEG00000007296	SCAF8	100	95.522	Octodon_degus
ENSPPAG00000039826	SCAF8	100	55.359	ENSONIG00000008119	SCAF8	99	55.383	Oreochromis_niloticus
ENSPPAG00000039826	SCAF8	99	96.513	ENSOCUG00000026063	SCAF8	99	96.513	Oryctolagus_cuniculus
ENSPPAG00000039826	SCAF8	86	68.927	ENSORLG00000017358	SCAF8	78	68.927	Oryzias_latipes
ENSPPAG00000039826	SCAF8	86	69.051	ENSORLG00020002214	SCAF8	78	67.788	Oryzias_latipes_hni
ENSPPAG00000039826	SCAF8	86	69.174	ENSORLG00015015779	SCAF8	78	69.174	Oryzias_latipes_hsok
ENSPPAG00000039826	SCAF8	93	56.766	ENSOMEG00000015471	SCAF8	77	66.053	Oryzias_melastigma
ENSPPAG00000039826	SCAF8	99	96.590	ENSOGAG00000034223	SCAF8	97	95.046	Otolemur_garnettii
ENSPPAG00000039826	SCAF8	99	95.083	ENSOARG00000004159	SCAF8	100	95.008	Ovis_aries
ENSPPAG00000039826	SCAF8	100	97.168	ENSPPRG00000023175	SCAF8	100	97.168	Panthera_pardus
ENSPPAG00000039826	SCAF8	99	97.070	ENSPTIG00000014836	SCAF8	100	97.070	Panthera_tigris_altaica
ENSPPAG00000039826	SCAF8	100	99.843	ENSPTRG00000018727	SCAF8	100	99.843	Pan_troglodytes
ENSPPAG00000039826	SCAF8	100	99.056	ENSPANG00000017489	SCAF8	100	97.089	Papio_anubis
ENSPPAG00000039826	SCAF8	100	56.929	ENSPKIG00000021212	SCAF8	100	57.078	Paramormyrops_kingsleyae
ENSPPAG00000039826	SCAF8	89	74.265	ENSPSIG00000008614	SCAF8	95	76.972	Pelodiscus_sinensis
ENSPPAG00000039826	SCAF8	99	92.076	ENSPEMG00000010531	Scaf8	100	92.076	Peromyscus_maniculatus_bairdii
ENSPPAG00000039826	SCAF8	100	87.431	ENSPCIG00000001141	SCAF8	100	87.431	Phascolarctos_cinereus
ENSPPAG00000039826	SCAF8	100	54.767	ENSPFOG00000004176	SCAF8	100	55.057	Poecilia_formosa
ENSPPAG00000039826	SCAF8	85	69.051	ENSPLAG00000021432	SCAF8	77	68.557	Poecilia_latipinna
ENSPPAG00000039826	SCAF8	85	69.297	ENSPMEG00000007591	SCAF8	84	68.258	Poecilia_mexicana
ENSPPAG00000039826	SCAF8	85	69.051	ENSPREG00000000652	SCAF8	77	68.557	Poecilia_reticulata
ENSPPAG00000039826	SCAF8	100	98.036	ENSPPYG00000017121	SCAF8	100	98.036	Pongo_abelii
ENSPPAG00000039826	SCAF8	85	97.152	ENSPCAG00000013044	SCAF8	90	97.152	Procavia_capensis
ENSPPAG00000039826	SCAF8	100	96.541	ENSPCOG00000002067	SCAF8	99	96.513	Propithecus_coquereli
ENSPPAG00000039826	SCAF8	99	92.252	ENSPVAG00000005582	SCAF8	100	93.291	Pteropus_vampyrus
ENSPPAG00000039826	SCAF8	86	69.184	ENSPNYG00000007277	SCAF8	80	68.780	Pundamilia_nyererei
ENSPPAG00000039826	SCAF8	86	68.543	ENSPNAG00000024740	SCAF8	82	68.911	Pygocentrus_nattereri
ENSPPAG00000039826	SCAF8	100	91.503	ENSRNOG00000016919	Scaf8	100	91.503	Rattus_norvegicus
ENSPPAG00000039826	SCAF8	100	98.977	ENSRBIG00000035769	SCAF8	100	98.977	Rhinopithecus_bieti
ENSPPAG00000039826	SCAF8	100	99.056	ENSRROG00000013580	SCAF8	100	99.056	Rhinopithecus_roxellana
ENSPPAG00000039826	SCAF8	100	98.190	ENSSBOG00000027023	SCAF8	100	98.190	Saimiri_boliviensis_boliviensis
ENSPPAG00000039826	SCAF8	100	86.735	ENSSHAG00000009915	SCAF8	100	86.735	Sarcophilus_harrisii
ENSPPAG00000039826	SCAF8	100	54.573	ENSSFOG00015009481	SCAF8	93	70.263	Scleropages_formosus
ENSPPAG00000039826	SCAF8	87	67.947	ENSSMAG00000008275	SCAF8	77	67.347	Scophthalmus_maximus
ENSPPAG00000039826	SCAF8	100	77.660	ENSSPUG00000015219	SCAF8	100	77.870	Sphenodon_punctatus
ENSPPAG00000039826	SCAF8	100	96.145	ENSSSCG00000004070	SCAF8	100	96.145	Sus_scrofa
ENSPPAG00000039826	SCAF8	99	80.330	ENSTGUG00000011151	SCAF8	100	80.503	Taeniopygia_guttata
ENSPPAG00000039826	SCAF8	85	67.857	ENSTRUG00000009243	SCAF8	78	67.857	Takifugu_rubripes
ENSPPAG00000039826	SCAF8	93	65.164	ENSTNIG00000016885	SCAF8	99	65.463	Tetraodon_nigroviridis
ENSPPAG00000039826	SCAF8	99	95.638	ENSTTRG00000014538	SCAF8	100	95.638	Tursiops_truncatus
ENSPPAG00000039826	SCAF8	100	96.381	ENSUAMG00000024736	SCAF8	99	96.355	Ursus_americanus
ENSPPAG00000039826	SCAF8	98	96.388	ENSUMAG00000013404	SCAF8	100	96.388	Ursus_maritimus
ENSPPAG00000039826	SCAF8	67	85.698	ENSVPAG00000012465	SCAF8	99	85.104	Vicugna_pacos
ENSPPAG00000039826	SCAF8	99	96.431	ENSVVUG00000007532	SCAF8	100	96.388	Vulpes_vulpes
ENSPPAG00000039826	SCAF8	100	61.485	ENSXETG00000013132	scaf8	100	61.503	Xenopus_tropicalis
ENSPPAG00000039826	SCAF8	85	69.174	ENSXMAG00000019192	SCAF8	78	68.681	Xiphophorus_maculatus