EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPPAG00000039842 (Gene tree)
Gene ID: 100994093
Gene Symbol: EXOSC1
Alias: -
Full Name: exosome component 1
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 9360 bases
Position: chr10:97552874-97562233
Accession: 100994093
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000033975	ECR1_N	PF14382.6	6.8e-09	1	1
ENSPPAP00000033973	ECR1_N	PF14382.6	1.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000056856	EXOSC1-202	465	-	ENSPPAP00000033975	154 (aa)	XP_024786079	A0A2R9BZQ2
ENSPPAT00000056854	EXOSC1-201	594	XM_014346513	ENSPPAP00000033973	197 (aa)	-	A0A2R9BWB6

Gene Model

Click here to download ENSPPAG00000039842's gene model file

Pathways

Pathway ID	Pathway Name	Source
pps03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000039842's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000039842	EXOSC1	100	100.000	ENSG00000171311	EXOSC1	100	93.909	Homo_sapiens
ENSPPAG00000039842	EXOSC1	98	74.093	ENSAPOG00000007822	exosc1	98	74.093	Acanthochromis_polyacanthus
ENSPPAG00000039842	EXOSC1	100	91.371	ENSAMEG00000000129	EXOSC1	100	91.371	Ailuropoda_melanoleuca
ENSPPAG00000039842	EXOSC1	96	73.684	ENSACIG00000018956	exosc1	92	73.684	Amphilophus_citrinellus
ENSPPAG00000039842	EXOSC1	98	74.093	ENSAOCG00000010699	exosc1	98	74.093	Amphiprion_ocellaris
ENSPPAG00000039842	EXOSC1	92	65.217	ENSAPEG00000012690	exosc1	96	65.217	Amphiprion_percula
ENSPPAG00000039842	EXOSC1	97	78.000	ENSATEG00000018683	exosc1	97	78.000	Anabas_testudineus
ENSPPAG00000039842	EXOSC1	99	79.592	ENSACAG00000002101	EXOSC1	99	79.592	Anolis_carolinensis
ENSPPAG00000039842	EXOSC1	100	98.701	ENSANAG00000034669	EXOSC1	100	98.701	Aotus_nancymaae
ENSPPAG00000039842	EXOSC1	97	78.523	ENSACLG00000021243	exosc1	97	78.523	Astatotilapia_calliptera
ENSPPAG00000039842	EXOSC1	97	80.000	ENSAMXG00000011116	exosc1	97	80.000	Astyanax_mexicanus
ENSPPAG00000039842	EXOSC1	100	92.893	ENSBTAG00000012699	EXOSC1	100	92.893	Bos_taurus
ENSPPAG00000039842	EXOSC1	92	32.984	WBGene00012966	exos-1	90	32.984	Caenorhabditis_elegans
ENSPPAG00000039842	EXOSC1	100	98.701	ENSCJAG00000016586	EXOSC1	100	98.701	Callithrix_jacchus
ENSPPAG00000039842	EXOSC1	100	90.863	ENSCAFG00000009068	EXOSC1	94	90.863	Canis_familiaris
ENSPPAG00000039842	EXOSC1	100	90.863	ENSCAFG00020006002	EXOSC1	94	90.863	Canis_lupus_dingo
ENSPPAG00000039842	EXOSC1	100	90.863	ENSCHIG00000015253	EXOSC1	100	90.863	Capra_hircus
ENSPPAG00000039842	EXOSC1	100	96.104	ENSTSYG00000000760	EXOSC1	100	96.104	Carlito_syrichta
ENSPPAG00000039842	EXOSC1	100	96.753	ENSCPOG00000001173	EXOSC1	100	96.753	Cavia_porcellus
ENSPPAG00000039842	EXOSC1	100	60.870	ENSCCAG00000023986	EXOSC1	100	60.870	Cebus_capucinus
ENSPPAG00000039842	EXOSC1	100	100.000	ENSCATG00000034114	EXOSC1	100	100.000	Cercocebus_atys
ENSPPAG00000039842	EXOSC1	100	97.403	ENSCLAG00000002463	EXOSC1	100	97.403	Chinchilla_lanigera
ENSPPAG00000039842	EXOSC1	100	93.401	ENSCSAG00000005870	EXOSC1	100	93.401	Chlorocebus_sabaeus
ENSPPAG00000039842	EXOSC1	96	77.249	ENSCHOG00000006477	EXOSC1	100	77.249	Choloepus_hoffmanni
ENSPPAG00000039842	EXOSC1	95	51.053	ENSCING00000022734	-	89	51.053	Ciona_intestinalis
ENSPPAG00000039842	EXOSC1	95	53.927	ENSCSAVG00000010865	-	95	53.927	Ciona_savignyi
ENSPPAG00000039842	EXOSC1	100	100.000	ENSCANG00000034159	EXOSC1	100	100.000	Colobus_angolensis_palliatus
ENSPPAG00000039842	EXOSC1	100	96.753	ENSCGRG00001000335	Exosc1	100	96.753	Cricetulus_griseus_chok1gshd
ENSPPAG00000039842	EXOSC1	100	96.753	ENSCGRG00000011602	Exosc1	100	96.753	Cricetulus_griseus_crigri
ENSPPAG00000039842	EXOSC1	98	61.140	ENSCSEG00000007895	exosc1	95	61.140	Cynoglossus_semilaevis
ENSPPAG00000039842	EXOSC1	98	71.503	ENSCVAG00000016748	exosc1	98	71.503	Cyprinodon_variegatus
ENSPPAG00000039842	EXOSC1	98	75.130	ENSDARG00000059841	exosc1	98	75.130	Danio_rerio
ENSPPAG00000039842	EXOSC1	76	89.333	ENSDNOG00000007983	EXOSC1	100	89.333	Dasypus_novemcinctus
ENSPPAG00000039842	EXOSC1	100	96.104	ENSDORG00000016528	Exosc1	100	96.104	Dipodomys_ordii
ENSPPAG00000039842	EXOSC1	94	43.455	FBgn0032346	Csl4	92	43.455	Drosophila_melanogaster
ENSPPAG00000039842	EXOSC1	100	89.394	ENSETEG00000002469	-	100	89.394	Echinops_telfairi
ENSPPAG00000039842	EXOSC1	99	56.566	ENSEBUG00000008164	exosc1	98	56.566	Eptatretus_burgeri
ENSPPAG00000039842	EXOSC1	100	81.726	ENSEASG00005008684	EXOSC1	100	81.726	Equus_asinus_asinus
ENSPPAG00000039842	EXOSC1	54	77.358	ENSECAG00000010621	EXOSC1	63	77.358	Equus_caballus
ENSPPAG00000039842	EXOSC1	100	90.863	ENSEEUG00000005647	EXOSC1	100	90.863	Erinaceus_europaeus
ENSPPAG00000039842	EXOSC1	94	75.269	ENSELUG00000017369	exosc1	97	62.371	Esox_lucius
ENSPPAG00000039842	EXOSC1	100	91.371	ENSFCAG00000040563	EXOSC1	94	91.371	Felis_catus
ENSPPAG00000039842	EXOSC1	100	78.283	ENSFALG00000008450	EXOSC1	100	78.283	Ficedula_albicollis
ENSPPAG00000039842	EXOSC1	100	91.371	ENSFDAG00000000846	EXOSC1	100	91.371	Fukomys_damarensis
ENSPPAG00000039842	EXOSC1	98	71.503	ENSFHEG00000009154	exosc1	98	71.503	Fundulus_heteroclitus
ENSPPAG00000039842	EXOSC1	98	74.093	ENSGMOG00000008993	exosc1	98	74.093	Gadus_morhua
ENSPPAG00000039842	EXOSC1	100	67.172	ENSGALG00000039917	EXOSC1	100	79.866	Gallus_gallus
ENSPPAG00000039842	EXOSC1	98	72.021	ENSGAFG00000010265	exosc1	94	72.021	Gambusia_affinis
ENSPPAG00000039842	EXOSC1	98	74.093	ENSGACG00000018936	exosc1	98	74.093	Gasterosteus_aculeatus
ENSPPAG00000039842	EXOSC1	100	80.303	ENSGAGG00000019192	EXOSC1	100	80.303	Gopherus_agassizii
ENSPPAG00000039842	EXOSC1	100	80.203	ENSGGOG00000003099	EXOSC1	100	80.203	Gorilla_gorilla
ENSPPAG00000039842	EXOSC1	98	74.093	ENSHBUG00000017857	exosc1	98	74.093	Haplochromis_burtoni
ENSPPAG00000039842	EXOSC1	100	97.403	ENSHGLG00000016927	EXOSC1	100	97.403	Heterocephalus_glaber_female
ENSPPAG00000039842	EXOSC1	100	97.403	ENSHGLG00100012208	EXOSC1	100	97.403	Heterocephalus_glaber_male
ENSPPAG00000039842	EXOSC1	98	73.057	ENSHCOG00000019882	exosc1	98	73.057	Hippocampus_comes
ENSPPAG00000039842	EXOSC1	98	76.821	ENSIPUG00000007685	exosc1	98	76.821	Ictalurus_punctatus
ENSPPAG00000039842	EXOSC1	100	97.403	ENSSTOG00000006615	EXOSC1	100	97.403	Ictidomys_tridecemlineatus
ENSPPAG00000039842	EXOSC1	54	83.962	ENSSTOG00000029860	-	80	83.962	Ictidomys_tridecemlineatus
ENSPPAG00000039842	EXOSC1	100	90.355	ENSJJAG00000013311	Exosc1	100	90.355	Jaculus_jaculus
ENSPPAG00000039842	EXOSC1	98	72.165	ENSKMAG00000001202	exosc1	81	72.165	Kryptolebias_marmoratus
ENSPPAG00000039842	EXOSC1	98	73.575	ENSLBEG00000011448	exosc1	98	73.575	Labrus_bergylta
ENSPPAG00000039842	EXOSC1	97	75.641	ENSLOCG00000003776	exosc1	98	75.641	Lepisosteus_oculatus
ENSPPAG00000039842	EXOSC1	100	90.863	ENSLAFG00000015983	EXOSC1	100	90.863	Loxodonta_africana
ENSPPAG00000039842	EXOSC1	100	100.000	ENSMFAG00000001493	EXOSC1	100	100.000	Macaca_fascicularis
ENSPPAG00000039842	EXOSC1	100	100.000	ENSMMUG00000020028	EXOSC1	100	100.000	Macaca_mulatta
ENSPPAG00000039842	EXOSC1	100	93.909	ENSMNEG00000029816	EXOSC1	100	93.909	Macaca_nemestrina
ENSPPAG00000039842	EXOSC1	100	100.000	ENSMLEG00000027643	EXOSC1	100	100.000	Mandrillus_leucophaeus
ENSPPAG00000039842	EXOSC1	98	74.611	ENSMAMG00000012200	exosc1	98	74.611	Mastacembelus_armatus
ENSPPAG00000039842	EXOSC1	97	78.523	ENSMZEG00005007042	exosc1	97	78.523	Maylandia_zebra
ENSPPAG00000039842	EXOSC1	100	78.788	ENSMAUG00000020462	-	100	78.788	Mesocricetus_auratus
ENSPPAG00000039842	EXOSC1	100	96.753	ENSMICG00000007664	EXOSC1	100	96.753	Microcebus_murinus
ENSPPAG00000039842	EXOSC1	100	96.753	ENSMOCG00000006004	-	100	96.753	Microtus_ochrogaster
ENSPPAG00000039842	EXOSC1	97	86.458	ENSMOCG00000017124	-	97	86.458	Microtus_ochrogaster
ENSPPAG00000039842	EXOSC1	99	77.124	ENSMMOG00000021403	exosc1	99	77.124	Mola_mola
ENSPPAG00000039842	EXOSC1	100	85.859	ENSMODG00000004213	EXOSC1	100	85.859	Monodelphis_domestica
ENSPPAG00000039842	EXOSC1	94	74.731	ENSMALG00000007061	exosc1	92	74.731	Monopterus_albus
ENSPPAG00000039842	EXOSC1	100	96.104	MGP_CAROLIEiJ_G0022959	Exosc1	100	96.104	Mus_caroli
ENSPPAG00000039842	EXOSC1	100	96.753	ENSMUSG00000034321	Exosc1	100	96.753	Mus_musculus
ENSPPAG00000039842	EXOSC1	100	96.753	MGP_PahariEiJ_G0014449	Exosc1	100	96.753	Mus_pahari
ENSPPAG00000039842	EXOSC1	100	96.104	MGP_SPRETEiJ_G0023880	Exosc1	100	96.104	Mus_spretus
ENSPPAG00000039842	EXOSC1	100	91.371	ENSMPUG00000017044	EXOSC1	100	91.371	Mustela_putorius_furo
ENSPPAG00000039842	EXOSC1	100	90.863	ENSMLUG00000009228	EXOSC1	100	90.863	Myotis_lucifugus
ENSPPAG00000039842	EXOSC1	100	89.394	ENSNGAG00000022033	Exosc1	100	89.394	Nannospalax_galili
ENSPPAG00000039842	EXOSC1	97	78.000	ENSNBRG00000024007	exosc1	97	78.000	Neolamprologus_brichardi
ENSPPAG00000039842	EXOSC1	100	100.000	ENSNLEG00000013872	EXOSC1	100	100.000	Nomascus_leucogenys
ENSPPAG00000039842	EXOSC1	54	88.679	ENSMEUG00000002246	EXOSC1	92	88.679	Notamacropus_eugenii
ENSPPAG00000039842	EXOSC1	100	89.899	ENSOPRG00000005065	EXOSC1	100	89.899	Ochotona_princeps
ENSPPAG00000039842	EXOSC1	100	96.753	ENSODEG00000016709	EXOSC1	100	96.753	Octodon_degus
ENSPPAG00000039842	EXOSC1	98	74.093	ENSONIG00000017683	exosc1	98	74.093	Oreochromis_niloticus
ENSPPAG00000039842	EXOSC1	69	76.636	ENSOANG00000006563	EXOSC1	98	81.746	Ornithorhynchus_anatinus
ENSPPAG00000039842	EXOSC1	100	85.354	ENSOCUG00000026461	-	100	85.354	Oryctolagus_cuniculus
ENSPPAG00000039842	EXOSC1	100	89.848	ENSOCUG00000011898	-	100	89.848	Oryctolagus_cuniculus
ENSPPAG00000039842	EXOSC1	98	72.680	ENSORLG00000011595	exosc1	98	72.680	Oryzias_latipes
ENSPPAG00000039842	EXOSC1	98	72.680	ENSORLG00020005831	exosc1	98	72.680	Oryzias_latipes_hni
ENSPPAG00000039842	EXOSC1	98	72.680	ENSORLG00015004317	exosc1	98	72.680	Oryzias_latipes_hsok
ENSPPAG00000039842	EXOSC1	97	65.318	ENSOMEG00000013907	exosc1	98	65.318	Oryzias_melastigma
ENSPPAG00000039842	EXOSC1	100	90.355	ENSOGAG00000016259	EXOSC1	100	90.355	Otolemur_garnettii
ENSPPAG00000039842	EXOSC1	100	90.355	ENSOARG00000010136	EXOSC1	100	90.355	Ovis_aries
ENSPPAG00000039842	EXOSC1	100	91.371	ENSPPRG00000023366	EXOSC1	100	91.371	Panthera_pardus
ENSPPAG00000039842	EXOSC1	100	91.371	ENSPTIG00000017701	EXOSC1	100	91.371	Panthera_tigris_altaica
ENSPPAG00000039842	EXOSC1	100	100.000	ENSPTRG00000002808	EXOSC1	100	100.000	Pan_troglodytes
ENSPPAG00000039842	EXOSC1	100	100.000	ENSPANG00000021324	EXOSC1	100	100.000	Papio_anubis
ENSPPAG00000039842	EXOSC1	98	74.611	ENSPKIG00000016037	exosc1	98	74.611	Paramormyrops_kingsleyae
ENSPPAG00000039842	EXOSC1	75	81.757	ENSPSIG00000013571	EXOSC1	98	79.839	Pelodiscus_sinensis
ENSPPAG00000039842	EXOSC1	98	61.140	ENSPMGG00000014002	exosc1	98	61.140	Periophthalmus_magnuspinnatus
ENSPPAG00000039842	EXOSC1	100	96.753	ENSPEMG00000010710	-	100	96.753	Peromyscus_maniculatus_bairdii
ENSPPAG00000039842	EXOSC1	95	65.079	ENSPMAG00000000195	exosc1	95	65.079	Petromyzon_marinus
ENSPPAG00000039842	EXOSC1	100	86.802	ENSPCIG00000002210	EXOSC1	99	86.802	Phascolarctos_cinereus
ENSPPAG00000039842	EXOSC1	98	71.134	ENSPFOG00000006755	exosc1	94	71.134	Poecilia_formosa
ENSPPAG00000039842	EXOSC1	98	71.503	ENSPLAG00000005880	exosc1	98	71.503	Poecilia_latipinna
ENSPPAG00000039842	EXOSC1	98	71.134	ENSPMEG00000015598	exosc1	94	71.134	Poecilia_mexicana
ENSPPAG00000039842	EXOSC1	98	59.794	ENSPREG00000000405	exosc1	93	59.794	Poecilia_reticulata
ENSPPAG00000039842	EXOSC1	100	93.401	ENSPPYG00000002531	EXOSC1	100	93.401	Pongo_abelii
ENSPPAG00000039842	EXOSC1	100	90.355	ENSPCAG00000009135	EXOSC1	100	90.355	Procavia_capensis
ENSPPAG00000039842	EXOSC1	100	89.848	ENSPCOG00000027539	EXOSC1	100	89.848	Propithecus_coquereli
ENSPPAG00000039842	EXOSC1	100	91.371	ENSPVAG00000003372	EXOSC1	100	91.371	Pteropus_vampyrus
ENSPPAG00000039842	EXOSC1	98	74.093	ENSPNYG00000021745	exosc1	98	74.093	Pundamilia_nyererei
ENSPPAG00000039842	EXOSC1	98	74.611	ENSPNAG00000001944	exosc1	98	74.611	Pygocentrus_nattereri
ENSPPAG00000039842	EXOSC1	100	96.753	ENSRNOG00000048708	Exosc1	100	96.753	Rattus_norvegicus
ENSPPAG00000039842	EXOSC1	100	100.000	ENSRBIG00000035618	EXOSC1	100	100.000	Rhinopithecus_bieti
ENSPPAG00000039842	EXOSC1	100	100.000	ENSRROG00000032589	EXOSC1	100	100.000	Rhinopithecus_roxellana
ENSPPAG00000039842	EXOSC1	100	92.386	ENSSBOG00000000359	EXOSC1	100	92.386	Saimiri_boliviensis_boliviensis
ENSPPAG00000039842	EXOSC1	75	87.248	ENSSHAG00000018219	EXOSC1	100	87.248	Sarcophilus_harrisii
ENSPPAG00000039842	EXOSC1	98	75.258	ENSSFOG00015009069	exosc1	99	75.258	Scleropages_formosus
ENSPPAG00000039842	EXOSC1	97	72.396	ENSSFOG00015016289	-	98	72.396	Scleropages_formosus
ENSPPAG00000039842	EXOSC1	97	78.667	ENSSMAG00000003721	exosc1	97	78.667	Scophthalmus_maximus
ENSPPAG00000039842	EXOSC1	98	74.611	ENSSDUG00000002993	exosc1	98	74.611	Seriola_dumerili
ENSPPAG00000039842	EXOSC1	98	74.611	ENSSLDG00000025181	exosc1	98	74.611	Seriola_lalandi_dorsalis
ENSPPAG00000039842	EXOSC1	100	77.665	ENSSARG00000000162	EXOSC1	100	77.665	Sorex_araneus
ENSPPAG00000039842	EXOSC1	99	79.188	ENSSPUG00000012263	EXOSC1	99	79.188	Sphenodon_punctatus
ENSPPAG00000039842	EXOSC1	98	66.321	ENSSPAG00000016792	exosc1	82	66.321	Stegastes_partitus
ENSPPAG00000039842	EXOSC1	100	90.355	ENSSSCG00000010518	EXOSC1	91	90.355	Sus_scrofa
ENSPPAG00000039842	EXOSC1	98	75.897	ENSTGUG00000009692	EXOSC1	99	75.897	Taeniopygia_guttata
ENSPPAG00000039842	EXOSC1	97	68.063	ENSTRUG00000007706	exosc1	98	68.063	Takifugu_rubripes
ENSPPAG00000039842	EXOSC1	97	68.041	ENSTNIG00000014079	exosc1	97	68.041	Tetraodon_nigroviridis
ENSPPAG00000039842	EXOSC1	100	82.741	ENSTBEG00000006011	EXOSC1	100	82.741	Tupaia_belangeri
ENSPPAG00000039842	EXOSC1	94	90.860	ENSTTRG00000009887	EXOSC1	100	90.860	Tursiops_truncatus
ENSPPAG00000039842	EXOSC1	100	83.756	ENSUAMG00000010266	EXOSC1	100	83.756	Ursus_americanus
ENSPPAG00000039842	EXOSC1	100	83.249	ENSUMAG00000022002	EXOSC1	100	83.249	Ursus_maritimus
ENSPPAG00000039842	EXOSC1	100	90.863	ENSVVUG00000023192	EXOSC1	63	90.863	Vulpes_vulpes
ENSPPAG00000039842	EXOSC1	98	73.333	ENSXETG00000003434	exosc1	99	73.333	Xenopus_tropicalis
ENSPPAG00000039842	EXOSC1	62	76.230	ENSXCOG00000014499	exosc1	92	76.230	Xiphophorus_couchianus
ENSPPAG00000039842	EXOSC1	98	60.309	ENSXMAG00000023382	exosc1	93	60.309	Xiphophorus_maculatus