EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000039955 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 1510 bases
Position: chr11:122346366-122347875
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000034229	SF3a60_bindingd	PF12108.8	8.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000057110	-	1266	-	ENSPPAP00000034229	421 (aa)	-	A0A2R9C6S1

Gene Model

Click here to download ENSPPAG00000039955's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000039955's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000039955	-	100	76.647	ENSPPAG00000034066	SF3A3	100	77.246

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000039955	-	100	76.647	ENSG00000183431	SF3A3	100	77.246	Homo_sapiens
ENSPPAG00000039955	-	100	69.261	ENSAPOG00000015608	sf3a3	100	69.661	Acanthochromis_polyacanthus
ENSPPAG00000039955	-	100	76.447	ENSAMEG00000001262	SF3A3	100	77.046	Ailuropoda_melanoleuca
ENSPPAG00000039955	-	94	64.300	ENSACIG00000009061	sf3a3	99	64.694	Amphilophus_citrinellus
ENSPPAG00000039955	-	100	69.860	ENSAOCG00000013954	sf3a3	100	70.259	Amphiprion_ocellaris
ENSPPAG00000039955	-	100	69.860	ENSAPEG00000007297	sf3a3	100	70.259	Amphiprion_percula
ENSPPAG00000039955	-	100	69.261	ENSATEG00000008754	sf3a3	100	69.661	Anabas_testudineus
ENSPPAG00000039955	-	92	73.774	ENSAPLG00000014900	SF3A3	100	74.414	Anas_platyrhynchos
ENSPPAG00000039955	-	100	73.253	ENSACAG00000017058	SF3A3	100	73.852	Anolis_carolinensis
ENSPPAG00000039955	-	90	78.462	ENSANAG00000036903	-	100	64.544	Aotus_nancymaae
ENSPPAG00000039955	-	99	72.892	ENSANAG00000014878	SF3A3	100	73.494	Aotus_nancymaae
ENSPPAG00000039955	-	100	69.860	ENSACLG00000017977	sf3a3	100	70.259	Astatotilapia_calliptera
ENSPPAG00000039955	-	100	70.259	ENSAMXG00000016855	sf3a3	87	70.858	Astyanax_mexicanus
ENSPPAG00000039955	-	100	76.248	ENSBTAG00000007299	SF3A3	100	76.846	Bos_taurus
ENSPPAG00000039955	-	100	38.523	WBGene00011758	T13H5.4	100	39.321	Caenorhabditis_elegans
ENSPPAG00000039955	-	100	76.647	ENSCJAG00000002176	SF3A3	100	77.246	Callithrix_jacchus
ENSPPAG00000039955	-	100	76.447	ENSCAFG00000000683	-	100	77.046	Canis_familiaris
ENSPPAG00000039955	-	100	76.447	ENSCAFG00000003222	-	100	77.046	Canis_familiaris
ENSPPAG00000039955	-	100	76.447	ENSCAFG00020006186	SF3A3	100	77.046	Canis_lupus_dingo
ENSPPAG00000039955	-	100	76.248	ENSCHIG00000020638	SF3A3	100	76.846	Capra_hircus
ENSPPAG00000039955	-	100	77.872	ENSTSYG00000008417	SF3A3	100	78.723	Carlito_syrichta
ENSPPAG00000039955	-	59	58.000	ENSCAPG00000003466	SF3A3	100	48.454	Cavia_aperea
ENSPPAG00000039955	-	100	76.248	ENSCPOG00000008660	SF3A3	100	76.846	Cavia_porcellus
ENSPPAG00000039955	-	77	92.308	ENSCCAG00000034048	-	100	58.996	Cebus_capucinus
ENSPPAG00000039955	-	100	76.647	ENSCCAG00000033732	SF3A3	100	77.246	Cebus_capucinus
ENSPPAG00000039955	-	100	71.024	ENSCATG00000043537	-	100	71.336	Cercocebus_atys
ENSPPAG00000039955	-	93	63.991	ENSCATG00000041660	-	99	63.853	Cercocebus_atys
ENSPPAG00000039955	-	100	76.647	ENSCATG00000043496	SF3A3	100	77.246	Cercocebus_atys
ENSPPAG00000039955	-	100	75.848	ENSCLAG00000010838	SF3A3	100	76.447	Chinchilla_lanigera
ENSPPAG00000039955	-	94	75.630	ENSCSAG00000001120	SF3A3	100	76.261	Chlorocebus_sabaeus
ENSPPAG00000039955	-	75	57.143	ENSCHOG00000006849	SF3A3	79	57.143	Choloepus_hoffmanni
ENSPPAG00000039955	-	80	63.506	ENSCPBG00000007472	-	95	62.644	Chrysemys_picta_bellii
ENSPPAG00000039955	-	100	66.866	ENSCPBG00000018291	-	100	67.465	Chrysemys_picta_bellii
ENSPPAG00000039955	-	100	51.394	ENSCING00000002730	-	100	51.195	Ciona_intestinalis
ENSPPAG00000039955	-	100	51.904	ENSCSAVG00000005063	-	100	51.703	Ciona_savignyi
ENSPPAG00000039955	-	100	76.647	ENSCANG00000042083	SF3A3	100	77.246	Colobus_angolensis_palliatus
ENSPPAG00000039955	-	100	70.694	ENSCANG00000035535	-	100	70.640	Colobus_angolensis_palliatus
ENSPPAG00000039955	-	100	75.848	ENSCGRG00001011320	Sf3a3	100	76.447	Cricetulus_griseus_chok1gshd
ENSPPAG00000039955	-	100	75.848	ENSCGRG00000012156	Sf3a3	100	76.447	Cricetulus_griseus_crigri
ENSPPAG00000039955	-	100	68.663	ENSCSEG00000010401	sf3a3	100	68.862	Cynoglossus_semilaevis
ENSPPAG00000039955	-	92	67.377	ENSCVAG00000010239	sf3a3	95	67.804	Cyprinodon_variegatus
ENSPPAG00000039955	-	100	70.060	ENSDARG00000100114	sf3a3	100	70.060	Danio_rerio
ENSPPAG00000039955	-	91	75.711	ENSDNOG00000046628	SF3A3	99	76.368	Dasypus_novemcinctus
ENSPPAG00000039955	-	100	76.048	ENSDORG00000008798	Sf3a3	100	76.647	Dipodomys_ordii
ENSPPAG00000039955	-	100	48.221	FBgn0014366	noi	100	48.419	Drosophila_melanogaster
ENSPPAG00000039955	-	100	62.425	ENSEBUG00000015411	sf3a3	92	62.425	Eptatretus_burgeri
ENSPPAG00000039955	-	100	76.447	ENSEASG00005012906	SF3A3	100	77.046	Equus_asinus_asinus
ENSPPAG00000039955	-	100	76.447	ENSECAG00000017333	SF3A3	100	77.046	Equus_caballus
ENSPPAG00000039955	-	100	67.665	ENSELUG00000010024	sf3a3	100	68.064	Esox_lucius
ENSPPAG00000039955	-	100	76.447	ENSFCAG00000027772	SF3A3	100	77.046	Felis_catus
ENSPPAG00000039955	-	100	74.251	ENSFALG00000001003	SF3A3	100	74.850	Ficedula_albicollis
ENSPPAG00000039955	-	100	76.248	ENSFDAG00000020908	SF3A3	100	76.846	Fukomys_damarensis
ENSPPAG00000039955	-	100	68.064	ENSFHEG00000019107	sf3a3	100	68.463	Fundulus_heteroclitus
ENSPPAG00000039955	-	100	67.864	ENSGMOG00000015540	sf3a3	100	68.263	Gadus_morhua
ENSPPAG00000039955	-	100	74.251	ENSGALG00000001540	SF3A3	100	74.850	Gallus_gallus
ENSPPAG00000039955	-	100	68.463	ENSGAFG00000002320	sf3a3	100	68.862	Gambusia_affinis
ENSPPAG00000039955	-	100	69.461	ENSGACG00000007842	sf3a3	100	69.661	Gasterosteus_aculeatus
ENSPPAG00000039955	-	100	74.251	ENSGAGG00000014980	SF3A3	100	74.850	Gopherus_agassizii
ENSPPAG00000039955	-	100	76.647	ENSGGOG00000013928	SF3A3	100	77.246	Gorilla_gorilla
ENSPPAG00000039955	-	100	91.475	ENSGGOG00000022611	-	100	91.475	Gorilla_gorilla
ENSPPAG00000039955	-	100	69.860	ENSHBUG00000018158	sf3a3	100	70.259	Haplochromis_burtoni
ENSPPAG00000039955	-	100	76.248	ENSHGLG00000012502	SF3A3	100	76.846	Heterocephalus_glaber_female
ENSPPAG00000039955	-	100	76.248	ENSHGLG00100010546	SF3A3	100	76.846	Heterocephalus_glaber_male
ENSPPAG00000039955	-	100	67.665	ENSHCOG00000015109	sf3a3	100	68.064	Hippocampus_comes
ENSPPAG00000039955	-	100	69.461	ENSIPUG00000011603	sf3a3	100	70.060	Ictalurus_punctatus
ENSPPAG00000039955	-	100	76.048	ENSSTOG00000001691	SF3A3	100	76.647	Ictidomys_tridecemlineatus
ENSPPAG00000039955	-	100	76.048	ENSJJAG00000012404	Sf3a3	100	76.647	Jaculus_jaculus
ENSPPAG00000039955	-	100	68.862	ENSKMAG00000007632	sf3a3	100	69.261	Kryptolebias_marmoratus
ENSPPAG00000039955	-	100	62.550	ENSLBEG00000000816	sf3a3	100	62.948	Labrus_bergylta
ENSPPAG00000039955	-	100	70.659	ENSLOCG00000003273	sf3a3	100	71.058	Lepisosteus_oculatus
ENSPPAG00000039955	-	100	65.269	ENSLAFG00000008094	SF3A3	100	65.868	Loxodonta_africana
ENSPPAG00000039955	-	93	68.009	ENSMFAG00000036706	-	99	68.080	Macaca_fascicularis
ENSPPAG00000039955	-	100	76.647	ENSMFAG00000043047	SF3A3	100	77.246	Macaca_fascicularis
ENSPPAG00000039955	-	100	76.647	ENSMMUG00000023199	SF3A3	100	77.246	Macaca_mulatta
ENSPPAG00000039955	-	100	65.625	ENSMMUG00000038820	-	100	65.696	Macaca_mulatta
ENSPPAG00000039955	-	100	76.647	ENSMNEG00000044291	SF3A3	100	77.246	Macaca_nemestrina
ENSPPAG00000039955	-	93	63.938	ENSMNEG00000028686	-	99	63.797	Macaca_nemestrina
ENSPPAG00000039955	-	100	66.194	ENSMLEG00000036714	-	100	66.061	Mandrillus_leucophaeus
ENSPPAG00000039955	-	100	76.647	ENSMLEG00000030641	SF3A3	100	77.246	Mandrillus_leucophaeus
ENSPPAG00000039955	-	100	70.282	ENSMLEG00000028631	-	100	71.150	Mandrillus_leucophaeus
ENSPPAG00000039955	-	100	69.261	ENSMAMG00000001942	sf3a3	100	69.661	Mastacembelus_armatus
ENSPPAG00000039955	-	100	69.860	ENSMZEG00005016987	sf3a3	100	70.259	Maylandia_zebra
ENSPPAG00000039955	-	100	69.781	ENSMGAG00000002875	SF3A3	100	70.378	Meleagris_gallopavo
ENSPPAG00000039955	-	100	70.766	ENSMICG00000043548	-	100	70.363	Microcebus_murinus
ENSPPAG00000039955	-	91	73.581	ENSMICG00000026541	-	100	74.017	Microcebus_murinus
ENSPPAG00000039955	-	100	72.435	ENSMICG00000001485	-	100	73.038	Microcebus_murinus
ENSPPAG00000039955	-	94	70.701	ENSMOCG00000014565	-	97	70.488	Microtus_ochrogaster
ENSPPAG00000039955	-	100	72.056	ENSMOCG00000019939	-	100	72.655	Microtus_ochrogaster
ENSPPAG00000039955	-	100	69.661	ENSMMOG00000014307	sf3a3	100	70.060	Mola_mola
ENSPPAG00000039955	-	100	66.863	ENSMODG00000017729	-	100	67.653	Monodelphis_domestica
ENSPPAG00000039955	-	100	70.060	ENSMODG00000024045	-	100	70.659	Monodelphis_domestica
ENSPPAG00000039955	-	100	68.862	ENSMALG00000004836	sf3a3	100	69.261	Monopterus_albus
ENSPPAG00000039955	-	100	75.848	MGP_CAROLIEiJ_G0026449	Sf3a3	100	76.447	Mus_caroli
ENSPPAG00000039955	-	100	75.848	ENSMUSG00000028902	Sf3a3	100	76.447	Mus_musculus
ENSPPAG00000039955	-	100	70.459	MGP_PahariEiJ_G0028780	Sf3a3	100	71.058	Mus_pahari
ENSPPAG00000039955	-	100	75.848	MGP_SPRETEiJ_G0027428	Sf3a3	100	76.447	Mus_spretus
ENSPPAG00000039955	-	100	76.048	ENSMLUG00000000991	SF3A3	100	76.647	Myotis_lucifugus
ENSPPAG00000039955	-	100	69.860	ENSNGAG00000018032	Sf3a3	100	70.459	Nannospalax_galili
ENSPPAG00000039955	-	100	70.287	ENSNLEG00000011720	SF3A3	100	70.902	Nomascus_leucogenys
ENSPPAG00000039955	-	100	76.248	ENSOPRG00000012785	SF3A3	100	76.846	Ochotona_princeps
ENSPPAG00000039955	-	100	75.050	ENSODEG00000006854	-	100	74.850	Octodon_degus
ENSPPAG00000039955	-	100	74.633	ENSODEG00000018393	-	100	75.052	Octodon_degus
ENSPPAG00000039955	-	100	76.660	ENSODEG00000000937	-	100	77.730	Octodon_degus
ENSPPAG00000039955	-	100	71.058	ENSODEG00000007470	-	100	71.657	Octodon_degus
ENSPPAG00000039955	-	84	69.195	ENSONIG00000010296	sf3a3	100	69.655	Oreochromis_niloticus
ENSPPAG00000039955	-	92	74.627	ENSOANG00000002473	SF3A3	100	75.267	Ornithorhynchus_anatinus
ENSPPAG00000039955	-	100	76.248	ENSOCUG00000005407	SF3A3	100	76.846	Oryctolagus_cuniculus
ENSPPAG00000039955	-	100	68.463	ENSORLG00000008175	sf3a3	100	68.862	Oryzias_latipes
ENSPPAG00000039955	-	100	68.263	ENSORLG00020013708	sf3a3	100	68.663	Oryzias_latipes_hni
ENSPPAG00000039955	-	100	68.263	ENSORLG00015004104	sf3a3	100	68.663	Oryzias_latipes_hsok
ENSPPAG00000039955	-	100	68.663	ENSOMEG00000020177	sf3a3	100	69.062	Oryzias_melastigma
ENSPPAG00000039955	-	100	76.248	ENSOARG00000019950	SF3A3	100	76.846	Ovis_aries
ENSPPAG00000039955	-	100	76.447	ENSPPRG00000001258	SF3A3	100	77.046	Panthera_pardus
ENSPPAG00000039955	-	100	76.447	ENSPTIG00000007515	SF3A3	100	77.046	Panthera_tigris_altaica
ENSPPAG00000039955	-	100	76.647	ENSPTRG00000000559	SF3A3	100	77.246	Pan_troglodytes
ENSPPAG00000039955	-	100	93.088	ENSPTRG00000046013	-	100	93.088	Pan_troglodytes
ENSPPAG00000039955	-	100	68.623	ENSPANG00000029393	-	100	68.485	Papio_anubis
ENSPPAG00000039955	-	100	76.647	ENSPANG00000021859	SF3A3	100	77.246	Papio_anubis
ENSPPAG00000039955	-	100	71.715	ENSPANG00000031214	-	100	70.953	Papio_anubis
ENSPPAG00000039955	-	100	70.659	ENSPKIG00000004719	sf3a3	100	71.058	Paramormyrops_kingsleyae
ENSPPAG00000039955	-	100	72.366	ENSPSIG00000004273	SF3A3	100	73.161	Pelodiscus_sinensis
ENSPPAG00000039955	-	91	67.615	ENSPMGG00000003610	sf3a3	94	68.271	Periophthalmus_magnuspinnatus
ENSPPAG00000039955	-	100	75.848	ENSPEMG00000020805	Sf3a3	100	76.447	Peromyscus_maniculatus_bairdii
ENSPPAG00000039955	-	61	69.517	ENSPMAG00000001044	sf3a3	97	69.517	Petromyzon_marinus
ENSPPAG00000039955	-	100	75.848	ENSPCIG00000025719	SF3A3	100	76.447	Phascolarctos_cinereus
ENSPPAG00000039955	-	100	68.463	ENSPFOG00000005284	sf3a3	100	68.862	Poecilia_formosa
ENSPPAG00000039955	-	99	64.990	ENSPLAG00000003979	sf3a3	92	65.392	Poecilia_latipinna
ENSPPAG00000039955	-	87	72.280	ENSPMEG00000021132	sf3a3	86	73.057	Poecilia_mexicana
ENSPPAG00000039955	-	100	68.463	ENSPREG00000013802	sf3a3	100	68.862	Poecilia_reticulata
ENSPPAG00000039955	-	100	73.852	ENSPPYG00000001519	SF3A3	100	74.451	Pongo_abelii
ENSPPAG00000039955	-	100	70.659	ENSPCAG00000010734	SF3A3	100	71.457	Procavia_capensis
ENSPPAG00000039955	-	100	70.325	ENSPCOG00000020389	-	100	70.935	Propithecus_coquereli
ENSPPAG00000039955	-	100	63.179	ENSPCOG00000017131	-	100	64.185	Propithecus_coquereli
ENSPPAG00000039955	-	87	83.399	ENSPVAG00000010158	SF3A3	88	83.399	Pteropus_vampyrus
ENSPPAG00000039955	-	100	69.860	ENSPNYG00000000786	sf3a3	100	70.259	Pundamilia_nyererei
ENSPPAG00000039955	-	100	70.259	ENSPNAG00000010298	sf3a3	100	70.858	Pygocentrus_nattereri
ENSPPAG00000039955	-	100	75.848	ENSRNOG00000007629	Sf3a3	100	76.447	Rattus_norvegicus
ENSPPAG00000039955	-	100	76.647	ENSRBIG00000043567	SF3A3	100	77.246	Rhinopithecus_bieti
ENSPPAG00000039955	-	100	58.215	ENSRBIG00000043833	-	100	59.432	Rhinopithecus_bieti
ENSPPAG00000039955	-	100	65.302	ENSRBIG00000041123	-	100	65.591	Rhinopithecus_bieti
ENSPPAG00000039955	-	93	66.292	ENSRROG00000032346	-	99	66.592	Rhinopithecus_roxellana
ENSPPAG00000039955	-	100	76.647	ENSRROG00000033888	SF3A3	100	77.246	Rhinopithecus_roxellana
ENSPPAG00000039955	-	84	79.310	ENSSBOG00000026932	-	100	59.459	Saimiri_boliviensis_boliviensis
ENSPPAG00000039955	-	83	87.129	ENSSBOG00000032688	SF3A3	100	87.129	Saimiri_boliviensis_boliviensis
ENSPPAG00000039955	-	89	75.055	ENSSHAG00000014530	SF3A3	100	75.717	Sarcophilus_harrisii
ENSPPAG00000039955	-	100	70.459	ENSSFOG00015005975	sf3a3	100	70.858	Scleropages_formosus
ENSPPAG00000039955	-	100	69.261	ENSSMAG00000020213	sf3a3	100	69.661	Scophthalmus_maximus
ENSPPAG00000039955	-	100	67.066	ENSSDUG00000011590	sf3a3	100	67.465	Seriola_dumerili
ENSPPAG00000039955	-	100	69.661	ENSSLDG00000020635	sf3a3	100	70.060	Seriola_lalandi_dorsalis
ENSPPAG00000039955	-	100	73.453	ENSSPUG00000004010	SF3A3	100	74.052	Sphenodon_punctatus
ENSPPAG00000039955	-	100	69.461	ENSSPAG00000018653	sf3a3	100	69.860	Stegastes_partitus
ENSPPAG00000039955	-	100	76.447	ENSSSCG00000003643	SF3A3	100	77.046	Sus_scrofa
ENSPPAG00000039955	-	84	72.644	ENSTGUG00000001466	SF3A3	99	73.333	Taeniopygia_guttata
ENSPPAG00000039955	-	100	68.263	ENSTRUG00000009089	sf3a3	100	68.663	Takifugu_rubripes
ENSPPAG00000039955	-	100	67.992	ENSTNIG00000009800	sf3a3	100	68.390	Tetraodon_nigroviridis
ENSPPAG00000039955	-	95	82.500	ENSTBEG00000007614	SF3A3	85	82.500	Tupaia_belangeri
ENSPPAG00000039955	-	100	76.600	ENSTTRG00000013519	SF3A3	100	77.200	Tursiops_truncatus
ENSPPAG00000039955	-	100	76.447	ENSUAMG00000006134	SF3A3	100	77.046	Ursus_americanus
ENSPPAG00000039955	-	100	76.447	ENSUMAG00000021250	SF3A3	100	77.046	Ursus_maritimus
ENSPPAG00000039955	-	73	86.411	ENSVPAG00000004778	SF3A3	73	86.411	Vicugna_pacos
ENSPPAG00000039955	-	100	78.719	ENSVVUG00000022908	SF3A3	100	79.545	Vulpes_vulpes
ENSPPAG00000039955	-	100	71.058	ENSXETG00000022923	sf3a3	100	71.856	Xenopus_tropicalis
ENSPPAG00000039955	-	100	68.463	ENSXMAG00000017165	sf3a3	100	68.862	Xiphophorus_maculatus