EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000040211 (Gene tree)
Gene ID: 100988793
Gene Symbol: SKIV2L
Alias: -
Full Name: Ski2 like RNA helicase
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Plus strand
Length: 10522 bases
Position: chr6:32506468-32516989
Accession: 100988793
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000034948	rRNA_proc-arch	PF13234.6	1.4e-41	1	1
ENSPPAP00000034935	rRNA_proc-arch	PF13234.6	1.7e-41	1	1
ENSPPAP00000034948	DEAD	PF00270.29	2.9e-16	1	1
ENSPPAP00000034935	DEAD	PF00270.29	3.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000057637	SKIV2L-201	210	-	ENSPPAP00000034753	69 (aa)	-	A0A2R9BYK6
ENSPPAT00000057820	SKIV2L-202	3738	XM_003831535	ENSPPAP00000034935	1245 (aa)	XP_003831583	A0A2R9C2B5
ENSPPAT00000057833	SKIV2L-203	3459	-	ENSPPAP00000034948	1152 (aa)	-	A0A2R9BZ44

Gene Model

Click here to download ENSPPAG00000040211's gene model file

Pathways

Pathway ID	Pathway Name	Source
pps03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000040211's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000040211	SKIV2L	86	36.506	ENSPPAG00000039291	MTREX	91	36.506

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000040211	SKIV2L	100	98.635	ENSG00000204351	SKIV2L	98	100.000	Homo_sapiens
ENSPPAG00000040211	SKIV2L	100	61.124	ENSAPOG00000008257	skiv2l	99	61.342	Acanthochromis_polyacanthus
ENSPPAG00000040211	SKIV2L	99	93.831	ENSAMEG00000002078	SKIV2L	98	93.760	Ailuropoda_melanoleuca
ENSPPAG00000040211	SKIV2L	99	59.634	ENSACIG00000016719	skiv2l	99	60.096	Amphilophus_citrinellus
ENSPPAG00000040211	SKIV2L	100	60.997	ENSAOCG00000017352	skiv2l	99	61.231	Amphiprion_ocellaris
ENSPPAG00000040211	SKIV2L	100	60.839	ENSAPEG00000001055	skiv2l	99	61.071	Amphiprion_percula
ENSPPAG00000040211	SKIV2L	100	60.587	ENSATEG00000007601	skiv2l	99	60.654	Anabas_testudineus
ENSPPAG00000040211	SKIV2L	100	64.863	ENSACAG00000011746	SKIV2L	99	65.689	Anolis_carolinensis
ENSPPAG00000040211	SKIV2L	100	96.707	ENSANAG00000037992	SKIV2L	99	96.707	Aotus_nancymaae
ENSPPAG00000040211	SKIV2L	100	61.186	ENSACLG00000006886	skiv2l	99	61.280	Astatotilapia_calliptera
ENSPPAG00000040211	SKIV2L	99	58.782	ENSAMXG00000011517	skiv2l	99	58.861	Astyanax_mexicanus
ENSPPAG00000040211	SKIV2L	99	93.922	ENSBTAG00000005587	SKIV2L	98	93.922	Bos_taurus
ENSPPAG00000040211	SKIV2L	96	39.510	WBGene00008502	skih-2	99	39.647	Caenorhabditis_elegans
ENSPPAG00000040211	SKIV2L	100	96.627	ENSCJAG00000002263	SKIV2L	99	96.627	Callithrix_jacchus
ENSPPAG00000040211	SKIV2L	99	93.831	ENSCAFG00000000679	SKIV2L	98	93.760	Canis_familiaris
ENSPPAG00000040211	SKIV2L	99	93.750	ENSCAFG00020000948	SKIV2L	98	93.679	Canis_lupus_dingo
ENSPPAG00000040211	SKIV2L	99	93.922	ENSCHIG00000012897	SKIV2L	98	93.922	Capra_hircus
ENSPPAG00000040211	SKIV2L	99	93.598	ENSTSYG00000012133	SKIV2L	98	93.598	Carlito_syrichta
ENSPPAG00000040211	SKIV2L	99	91.977	ENSCPOG00000001307	SKIV2L	98	91.977	Cavia_porcellus
ENSPPAG00000040211	SKIV2L	100	96.546	ENSCCAG00000026206	SKIV2L	100	96.528	Cebus_capucinus
ENSPPAG00000040211	SKIV2L	100	97.510	ENSCATG00000036901	SKIV2L	99	97.510	Cercocebus_atys
ENSPPAG00000040211	SKIV2L	99	92.382	ENSCLAG00000007678	SKIV2L	98	92.382	Chinchilla_lanigera
ENSPPAG00000040211	SKIV2L	100	97.189	ENSCSAG00000008988	SKIV2L	99	97.189	Chlorocebus_sabaeus
ENSPPAG00000040211	SKIV2L	86	64.912	ENSCPBG00000000343	SKIV2L	96	64.912	Chrysemys_picta_bellii
ENSPPAG00000040211	SKIV2L	94	52.337	ENSCING00000005576	-	99	50.716	Ciona_intestinalis
ENSPPAG00000040211	SKIV2L	100	97.671	ENSCANG00000039709	SKIV2L	100	97.483	Colobus_angolensis_palliatus
ENSPPAG00000040211	SKIV2L	99	92.632	ENSCGRG00001008385	Skiv2l	98	92.632	Cricetulus_griseus_chok1gshd
ENSPPAG00000040211	SKIV2L	100	61.160	ENSCSEG00000011326	skiv2l	98	61.009	Cynoglossus_semilaevis
ENSPPAG00000040211	SKIV2L	100	60.506	ENSCVAG00000003072	skiv2l	99	60.575	Cyprinodon_variegatus
ENSPPAG00000040211	SKIV2L	100	60.236	ENSDARG00000062206	skiv2l	99	60.223	Danio_rerio
ENSPPAG00000040211	SKIV2L	93	94.481	ENSDNOG00000037590	SKIV2L	98	87.409	Dasypus_novemcinctus
ENSPPAG00000040211	SKIV2L	93	44.828	FBgn0039117	tst	97	43.833	Drosophila_melanogaster
ENSPPAG00000040211	SKIV2L	75	91.465	ENSETEG00000009522	SKIV2L	69	91.465	Echinops_telfairi
ENSPPAG00000040211	SKIV2L	89	56.658	ENSEBUG00000013680	-	95	57.075	Eptatretus_burgeri
ENSPPAG00000040211	SKIV2L	94	94.435	ENSEASG00005015534	SKIV2L	99	94.435	Equus_asinus_asinus
ENSPPAG00000040211	SKIV2L	95	93.548	ENSECAG00000021823	SKIV2L	94	94.178	Equus_caballus
ENSPPAG00000040211	SKIV2L	57	98.024	ENSEEUG00000005049	SKIV2L	57	98.024	Erinaceus_europaeus
ENSPPAG00000040211	SKIV2L	100	59.937	ENSELUG00000000181	skiv2l	94	66.222	Esox_lucius
ENSPPAG00000040211	SKIV2L	99	94.318	ENSFCAG00000004519	SKIV2L	98	94.246	Felis_catus
ENSPPAG00000040211	SKIV2L	99	88.988	ENSFDAG00000009438	SKIV2L	98	89.231	Fukomys_damarensis
ENSPPAG00000040211	SKIV2L	100	60.537	ENSFHEG00000008853	skiv2l	99	60.606	Fundulus_heteroclitus
ENSPPAG00000040211	SKIV2L	99	58.946	ENSGMOG00000005926	skiv2l	98	58.918	Gadus_morhua
ENSPPAG00000040211	SKIV2L	86	59.818	ENSGALG00000035499	SKIV2L	99	59.919	Gallus_gallus
ENSPPAG00000040211	SKIV2L	100	60.773	ENSGAFG00000002382	skiv2l	99	60.845	Gambusia_affinis
ENSPPAG00000040211	SKIV2L	100	60.175	ENSGACG00000002927	skiv2l	98	60.161	Gasterosteus_aculeatus
ENSPPAG00000040211	SKIV2L	52	74.664	ENSGAGG00000015556	SKIV2L	81	73.856	Gopherus_agassizii
ENSPPAG00000040211	SKIV2L	100	98.635	ENSGGOG00000002270	SKIV2L	100	98.524	Gorilla_gorilla
ENSPPAG00000040211	SKIV2L	100	61.186	ENSHBUG00000000726	skiv2l	99	61.280	Haplochromis_burtoni
ENSPPAG00000040211	SKIV2L	99	90.615	ENSHGLG00000016596	SKIV2L	98	90.858	Heterocephalus_glaber_female
ENSPPAG00000040211	SKIV2L	99	87.945	ENSHGLG00100014161	SKIV2L	98	88.188	Heterocephalus_glaber_male
ENSPPAG00000040211	SKIV2L	99	59.223	ENSHCOG00000007191	skiv2l	100	59.223	Hippocampus_comes
ENSPPAG00000040211	SKIV2L	100	59.574	ENSIPUG00000016263	skiv2l	100	59.649	Ictalurus_punctatus
ENSPPAG00000040211	SKIV2L	100	93.574	ENSSTOG00000014596	SKIV2L	98	93.679	Ictidomys_tridecemlineatus
ENSPPAG00000040211	SKIV2L	71	60.488	ENSLACG00000002986	-	73	60.202	Latimeria_chalumnae
ENSPPAG00000040211	SKIV2L	99	93.517	ENSLAFG00000014231	SKIV2L	98	93.517	Loxodonta_africana
ENSPPAG00000040211	SKIV2L	100	97.430	ENSMFAG00000034235	SKIV2L	100	97.049	Macaca_fascicularis
ENSPPAG00000040211	SKIV2L	100	97.349	ENSMMUG00000000736	SKIV2L	100	96.962	Macaca_mulatta
ENSPPAG00000040211	SKIV2L	100	97.349	ENSMNEG00000044474	SKIV2L	100	96.962	Macaca_nemestrina
ENSPPAG00000040211	SKIV2L	100	97.590	ENSMLEG00000030512	SKIV2L	99	97.590	Mandrillus_leucophaeus
ENSPPAG00000040211	SKIV2L	100	60.491	ENSMAMG00000002927	skiv2l	99	60.560	Mastacembelus_armatus
ENSPPAG00000040211	SKIV2L	100	61.186	ENSMZEG00005026415	skiv2l	99	61.280	Maylandia_zebra
ENSPPAG00000040211	SKIV2L	68	57.480	ENSMGAG00000001320	SKIV2L	97	51.559	Meleagris_gallopavo
ENSPPAG00000040211	SKIV2L	99	92.065	ENSMAUG00000018613	Skiv2l	98	92.146	Mesocricetus_auratus
ENSPPAG00000040211	SKIV2L	99	94.489	ENSMICG00000046331	SKIV2L	98	94.489	Microcebus_murinus
ENSPPAG00000040211	SKIV2L	99	90.924	ENSMOCG00000014240	Skiv2l	98	91.005	Microtus_ochrogaster
ENSPPAG00000040211	SKIV2L	100	60.751	ENSMMOG00000014547	skiv2l	98	60.824	Mola_mola
ENSPPAG00000040211	SKIV2L	100	87.260	ENSMODG00000015052	SKIV2L	98	87.379	Monodelphis_domestica
ENSPPAG00000040211	SKIV2L	100	59.408	ENSMALG00000010535	skiv2l	98	59.385	Monopterus_albus
ENSPPAG00000040211	SKIV2L	99	92.227	MGP_CAROLIEiJ_G0021477	Skiv2l	98	92.227	Mus_caroli
ENSPPAG00000040211	SKIV2L	99	92.308	ENSMUSG00000040356	Skiv2l	98	92.308	Mus_musculus
ENSPPAG00000040211	SKIV2L	99	91.579	MGP_PahariEiJ_G0020472	Skiv2l	98	91.579	Mus_pahari
ENSPPAG00000040211	SKIV2L	99	92.065	MGP_SPRETEiJ_G0022382	Skiv2l	98	92.065	Mus_spretus
ENSPPAG00000040211	SKIV2L	99	93.588	ENSMPUG00000010567	SKIV2L	98	93.517	Mustela_putorius_furo
ENSPPAG00000040211	SKIV2L	99	92.626	ENSMLUG00000000628	SKIV2L	98	92.626	Myotis_lucifugus
ENSPPAG00000040211	SKIV2L	100	60.508	ENSNBRG00000018650	skiv2l	98	60.866	Neolamprologus_brichardi
ENSPPAG00000040211	SKIV2L	100	94.640	ENSNLEG00000006451	SKIV2L	100	94.640	Nomascus_leucogenys
ENSPPAG00000040211	SKIV2L	78	92.920	ENSMEUG00000006072	SKIV2L	77	92.920	Notamacropus_eugenii
ENSPPAG00000040211	SKIV2L	99	93.193	ENSOPRG00000003972	SKIV2L	98	93.193	Ochotona_princeps
ENSPPAG00000040211	SKIV2L	99	91.410	ENSODEG00000017516	SKIV2L	98	91.410	Octodon_degus
ENSPPAG00000040211	SKIV2L	100	61.606	ENSONIG00000013500	skiv2l	99	61.836	Oreochromis_niloticus
ENSPPAG00000040211	SKIV2L	99	94.003	ENSOCUG00000007019	SKIV2L	98	94.003	Oryctolagus_cuniculus
ENSPPAG00000040211	SKIV2L	100	61.028	ENSORLG00000002021	skiv2l	99	61.102	Oryzias_latipes
ENSPPAG00000040211	SKIV2L	100	60.870	ENSORLG00020009462	skiv2l	99	61.022	Oryzias_latipes_hni
ENSPPAG00000040211	SKIV2L	100	60.553	ENSORLG00015016750	skiv2l	99	60.623	Oryzias_latipes_hsok
ENSPPAG00000040211	SKIV2L	100	61.410	ENSOMEG00000008531	skiv2l	99	61.329	Oryzias_melastigma
ENSPPAG00000040211	SKIV2L	99	93.679	ENSOGAG00000009578	SKIV2L	98	93.679	Otolemur_garnettii
ENSPPAG00000040211	SKIV2L	99	88.300	ENSOARG00000002411	-	98	88.142	Ovis_aries
ENSPPAG00000040211	SKIV2L	99	94.399	ENSPPRG00000005017	SKIV2L	98	94.327	Panthera_pardus
ENSPPAG00000040211	SKIV2L	99	93.994	ENSPTIG00000021656	SKIV2L	98	93.922	Panthera_tigris_altaica
ENSPPAG00000040211	SKIV2L	100	99.036	ENSPTRG00000017997	SKIV2L	100	98.958	Pan_troglodytes
ENSPPAG00000040211	SKIV2L	100	96.323	ENSPANG00000011501	SKIV2L	100	96.323	Papio_anubis
ENSPPAG00000040211	SKIV2L	100	59.890	ENSPKIG00000011876	skiv2l	99	60.032	Paramormyrops_kingsleyae
ENSPPAG00000040211	SKIV2L	100	60.080	ENSPMGG00000019707	skiv2l	98	60.226	Periophthalmus_magnuspinnatus
ENSPPAG00000040211	SKIV2L	99	92.713	ENSPEMG00000019001	Skiv2l	98	92.713	Peromyscus_maniculatus_bairdii
ENSPPAG00000040211	SKIV2L	100	86.869	ENSPCIG00000018792	SKIV2L	98	86.985	Phascolarctos_cinereus
ENSPPAG00000040211	SKIV2L	100	60.695	ENSPFOG00000002424	skiv2l	99	60.925	Poecilia_formosa
ENSPPAG00000040211	SKIV2L	100	60.821	ENSPLAG00000018304	skiv2l	99	60.894	Poecilia_latipinna
ENSPPAG00000040211	SKIV2L	100	60.773	ENSPMEG00000006997	skiv2l	99	60.845	Poecilia_mexicana
ENSPPAG00000040211	SKIV2L	100	58.753	ENSPREG00000002277	skiv2l	98	58.885	Poecilia_reticulata
ENSPPAG00000040211	SKIV2L	100	97.831	ENSPPYG00000016472	SKIV2L	99	97.831	Pongo_abelii
ENSPPAG00000040211	SKIV2L	77	93.421	ENSPCAG00000004178	SKIV2L	77	93.421	Procavia_capensis
ENSPPAG00000040211	SKIV2L	99	95.219	ENSPCOG00000010308	SKIV2L	98	95.219	Propithecus_coquereli
ENSPPAG00000040211	SKIV2L	99	92.788	ENSPVAG00000005136	SKIV2L	98	92.788	Pteropus_vampyrus
ENSPPAG00000040211	SKIV2L	100	59.425	ENSPNYG00000017853	skiv2l	97	66.051	Pundamilia_nyererei
ENSPPAG00000040211	SKIV2L	99	60.128	ENSPNAG00000011823	skiv2l	99	60.304	Pygocentrus_nattereri
ENSPPAG00000040211	SKIV2L	99	92.551	ENSRNOG00000000421	Skiv2l	98	92.551	Rattus_norvegicus
ENSPPAG00000040211	SKIV2L	99	94.767	ENSRBIG00000035485	SKIV2L	99	94.767	Rhinopithecus_bieti
ENSPPAG00000040211	SKIV2L	100	97.510	ENSRROG00000036429	SKIV2L	99	97.510	Rhinopithecus_roxellana
ENSPPAG00000040211	SKIV2L	94	37.801	YLR398C	-	93	37.881	Saccharomyces_cerevisiae
ENSPPAG00000040211	SKIV2L	100	96.546	ENSSBOG00000027920	SKIV2L	99	96.546	Saimiri_boliviensis_boliviensis
ENSPPAG00000040211	SKIV2L	100	86.699	ENSSHAG00000008963	SKIV2L	98	85.761	Sarcophilus_harrisii
ENSPPAG00000040211	SKIV2L	100	61.085	ENSSFOG00015016930	skiv2l	99	61.239	Scleropages_formosus
ENSPPAG00000040211	SKIV2L	100	60.348	ENSSMAG00000020185	skiv2l	99	60.415	Scophthalmus_maximus
ENSPPAG00000040211	SKIV2L	100	60.979	ENSSDUG00000019977	skiv2l	99	61.053	Seriola_dumerili
ENSPPAG00000040211	SKIV2L	100	59.600	ENSSLDG00000024382	skiv2l	98	59.660	Seriola_lalandi_dorsalis
ENSPPAG00000040211	SKIV2L	100	62.122	ENSSPUG00000012945	SKIV2L	98	62.158	Sphenodon_punctatus
ENSPPAG00000040211	SKIV2L	95	60.300	ENSSPAG00000012904	skiv2l	98	60.455	Stegastes_partitus
ENSPPAG00000040211	SKIV2L	100	93.976	ENSSSCG00000001424	SKIV2L	98	94.003	Sus_scrofa
ENSPPAG00000040211	SKIV2L	77	64.965	ENSTRUG00000000966	skiv2l	88	62.534	Takifugu_rubripes
ENSPPAG00000040211	SKIV2L	100	59.777	ENSTNIG00000004382	skiv2l	98	59.663	Tetraodon_nigroviridis
ENSPPAG00000040211	SKIV2L	93	91.849	ENSTBEG00000003462	SKIV2L	93	91.849	Tupaia_belangeri
ENSPPAG00000040211	SKIV2L	99	88.979	ENSTTRG00000005931	SKIV2L	98	88.817	Tursiops_truncatus
ENSPPAG00000040211	SKIV2L	99	94.318	ENSUAMG00000024336	SKIV2L	98	94.246	Ursus_americanus
ENSPPAG00000040211	SKIV2L	94	94.435	ENSUMAG00000012666	SKIV2L	99	94.435	Ursus_maritimus
ENSPPAG00000040211	SKIV2L	99	94.003	ENSVVUG00000022807	SKIV2L	98	94.003	Vulpes_vulpes
ENSPPAG00000040211	SKIV2L	99	57.769	ENSXETG00000010932	skiv2l	98	57.853	Xenopus_tropicalis
ENSPPAG00000040211	SKIV2L	100	61.195	ENSXCOG00000019517	skiv2l	96	61.272	Xiphophorus_couchianus
ENSPPAG00000040211	SKIV2L	100	60.742	ENSXMAG00000014079	skiv2l	99	60.814	Xiphophorus_maculatus