EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000040710 (Gene tree)
Gene ID: 100968063
Gene Symbol: -
Alias: -
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Plus strand
Length: 54008 bases
Position: chr14:77462875-77516882
Accession: 100968063
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000035868	RRM_1	PF00076.22	3.2e-13	1	1
ENSPPAP00000035871	RRM_1	PF00076.22	3.5e-13	1	1
ENSPPAP00000035860	RRM_1	PF00076.22	5.6e-13	1	1
ENSPPAP00000035866	RRM_1	PF00076.22	7.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000058749	-	410	XM_003808884	ENSPPAP00000035860	109 (aa)	XP_003808932	A0A2R9CBZ7
ENSPPAT00000058760	-	279	-	ENSPPAP00000035871	93 (aa)	-	A0A2R9C4R5
ENSPPAT00000058757	-	297	-	ENSPPAP00000035868	98 (aa)	-	A0A2R9C1R0
ENSPPAT00000058755	-	375	-	ENSPPAP00000035866	124 (aa)	-	A0A2R9C4R2

Gene Model

Click here to download ENSPPAG00000040710's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000040710's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000040710	-	87	30.769	ENSPPAG00000043177	HNRNPDL	50	30.233
ENSPPAG00000040710	-	74	36.000	ENSPPAG00000037697	MSI2	62	32.895

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000040710	-	100	100.000	ENSG00000119705	SLIRP	100	100.000	Homo_sapiens
ENSPPAG00000040710	-	77	55.294	ENSAPOG00000001298	slirp	85	55.294	Acanthochromis_polyacanthus
ENSPPAG00000040710	-	96	80.899	ENSAMEG00000003975	SLIRP	85	80.519	Ailuropoda_melanoleuca
ENSPPAG00000040710	-	76	57.143	ENSACIG00000023083	slirp	83	57.143	Amphilophus_citrinellus
ENSPPAG00000040710	-	78	56.977	ENSAOCG00000006342	slirp	87	56.977	Amphiprion_ocellaris
ENSPPAG00000040710	-	78	56.977	ENSAPEG00000015719	-	88	56.977	Amphiprion_percula
ENSPPAG00000040710	-	78	56.977	ENSAPEG00000015917	slirp	87	56.977	Amphiprion_percula
ENSPPAG00000040710	-	72	59.701	ENSATEG00000013525	slirp	77	55.844	Anabas_testudineus
ENSPPAG00000040710	-	80	54.545	ENSAMXG00000018693	slirp	88	54.545	Astyanax_mexicanus
ENSPPAG00000040710	-	100	82.653	ENSCJAG00000016946	SLIRP	89	82.727	Callithrix_jacchus
ENSPPAG00000040710	-	95	78.409	ENSCAFG00020015876	-	86	70.833	Canis_lupus_dingo
ENSPPAG00000040710	-	100	81.452	ENSCCAG00000030130	SLIRP	89	82.727	Cebus_capucinus
ENSPPAG00000040710	-	100	86.022	ENSCATG00000036327	SLIRP	85	86.076	Cercocebus_atys
ENSPPAG00000040710	-	100	81.651	ENSCSAG00000011736	SLIRP	87	80.000	Chlorocebus_sabaeus
ENSPPAG00000040710	-	72	65.672	ENSCPBG00000026327	SLIRP	73	62.500	Chrysemys_picta_bellii
ENSPPAG00000040710	-	85	84.810	ENSCANG00000032892	SLIRP	86	80.952	Colobus_angolensis_palliatus
ENSPPAG00000040710	-	95	73.864	ENSCGRG00001024068	Slirp	86	66.316	Cricetulus_griseus_chok1gshd
ENSPPAG00000040710	-	95	73.864	ENSCGRG00000017440	Slirp	86	66.316	Cricetulus_griseus_crigri
ENSPPAG00000040710	-	100	48.980	ENSCSEG00000015766	slirp	77	54.545	Cynoglossus_semilaevis
ENSPPAG00000040710	-	73	64.706	ENSCVAG00000012504	slirp	69	64.286	Cyprinodon_variegatus
ENSPPAG00000040710	-	73	60.294	ENSDARG00000097753	slirp	72	59.459	Danio_rerio
ENSPPAG00000040710	-	82	65.556	ENSDNOG00000007721	SLIRP	83	64.835	Dasypus_novemcinctus
ENSPPAG00000040710	-	95	73.864	ENSDORG00000012379	Slirp	86	66.316	Dipodomys_ordii
ENSPPAG00000040710	-	90	66.327	ENSETEG00000010345	SLIRP	87	66.316	Echinops_telfairi
ENSPPAG00000040710	-	95	80.682	ENSEASG00005020193	SLIRP	87	71.134	Equus_asinus_asinus
ENSPPAG00000040710	-	96	61.321	ENSEEUG00000007257	SLIRP	90	64.835	Erinaceus_europaeus
ENSPPAG00000040710	-	77	51.765	ENSELUG00000016800	slirp	84	51.765	Esox_lucius
ENSPPAG00000040710	-	97	82.222	ENSFCAG00000036326	SLIRP	83	80.488	Felis_catus
ENSPPAG00000040710	-	72	55.224	ENSFALG00000012583	SLIRP	75	50.000	Ficedula_albicollis
ENSPPAG00000040710	-	96	67.021	ENSFDAG00000008347	SLIRP	79	66.292	Fukomys_damarensis
ENSPPAG00000040710	-	69	59.211	ENSFHEG00000004709	slirp	83	59.211	Fundulus_heteroclitus
ENSPPAG00000040710	-	86	51.250	ENSGMOG00000016948	slirp	83	48.276	Gadus_morhua
ENSPPAG00000040710	-	85	53.165	ENSGALG00000031238	SLIRP	73	56.522	Gallus_gallus
ENSPPAG00000040710	-	75	64.286	ENSGAFG00000010998	slirp	84	60.714	Gambusia_affinis
ENSPPAG00000040710	-	73	57.353	ENSGACG00000020137	slirp	84	55.556	Gasterosteus_aculeatus
ENSPPAG00000040710	-	72	71.642	ENSGAGG00000009953	SLIRP	62	60.000	Gopherus_agassizii
ENSPPAG00000040710	-	100	100.000	ENSGGOG00000011059	-	100	100.000	Gorilla_gorilla
ENSPPAG00000040710	-	100	57.658	ENSHGLG00000018491	SLIRP	83	59.783	Heterocephalus_glaber_female
ENSPPAG00000040710	-	100	57.658	ENSHGLG00100014153	SLIRP	83	59.783	Heterocephalus_glaber_male
ENSPPAG00000040710	-	73	63.235	ENSHCOG00000006795	slirp	90	55.056	Hippocampus_comes
ENSPPAG00000040710	-	77	52.941	ENSIPUG00000010214	SLIRP	85	52.941	Ictalurus_punctatus
ENSPPAG00000040710	-	100	69.369	ENSSTOG00000034316	SLIRP	87	67.010	Ictidomys_tridecemlineatus
ENSPPAG00000040710	-	73	50.000	ENSKMAG00000002038	slirp	73	47.368	Kryptolebias_marmoratus
ENSPPAG00000040710	-	77	52.941	ENSLBEG00000007564	slirp	85	52.941	Labrus_bergylta
ENSPPAG00000040710	-	82	53.333	ENSLACG00000013434	SLIRP	87	53.333	Latimeria_chalumnae
ENSPPAG00000040710	-	100	87.097	ENSMFAG00000042960	SLIRP	85	86.076	Macaca_fascicularis
ENSPPAG00000040710	-	100	87.097	ENSMMUG00000029256	SLIRP	85	86.076	Macaca_mulatta
ENSPPAG00000040710	-	100	87.097	ENSMNEG00000028921	SLIRP	85	86.076	Macaca_nemestrina
ENSPPAG00000040710	-	100	86.022	ENSMLEG00000043644	SLIRP	86	82.143	Mandrillus_leucophaeus
ENSPPAG00000040710	-	77	56.471	ENSMZEG00005004617	slirp	86	56.471	Maylandia_zebra
ENSPPAG00000040710	-	95	73.864	ENSMAUG00000003857	Slirp	85	68.085	Mesocricetus_auratus
ENSPPAG00000040710	-	96	77.528	ENSMICG00000012080	SLIRP	88	73.636	Microcebus_murinus
ENSPPAG00000040710	-	95	72.727	ENSMOCG00000016019	Slirp	83	68.817	Microtus_ochrogaster
ENSPPAG00000040710	-	78	52.326	ENSMMOG00000018268	slirp	85	52.941	Mola_mola
ENSPPAG00000040710	-	74	65.217	ENSMODG00000005207	-	100	64.789	Monodelphis_domestica
ENSPPAG00000040710	-	73	58.824	ENSMALG00000012581	slirp	77	57.333	Monopterus_albus
ENSPPAG00000040710	-	95	76.136	MGP_CAROLIEiJ_G0017995	Slirp	87	69.149	Mus_caroli
ENSPPAG00000040710	-	95	77.273	ENSMUSG00000021040	Slirp	78	77.922	Mus_musculus
ENSPPAG00000040710	-	95	77.273	MGP_SPRETEiJ_G0018840	Slirp	85	69.474	Mus_spretus
ENSPPAG00000040710	-	90	71.591	ENSMLUG00000029544	-	87	64.948	Myotis_lucifugus
ENSPPAG00000040710	-	85	64.211	ENSMLUG00000024998	-	87	63.918	Myotis_lucifugus
ENSPPAG00000040710	-	95	71.591	ENSNGAG00000016363	Slirp	90	69.149	Nannospalax_galili
ENSPPAG00000040710	-	93	83.168	ENSNLEG00000027238	-	91	84.211	Nomascus_leucogenys
ENSPPAG00000040710	-	100	91.935	ENSNLEG00000032459	-	89	92.727	Nomascus_leucogenys
ENSPPAG00000040710	-	96	77.528	ENSODEG00000012580	SLIRP	83	78.947	Octodon_degus
ENSPPAG00000040710	-	72	61.194	ENSONIG00000011692	slirp	89	51.136	Oreochromis_niloticus
ENSPPAG00000040710	-	95	62.500	ENSOANG00000022366	SLIRP	84	62.766	Ornithorhynchus_anatinus
ENSPPAG00000040710	-	75	55.422	ENSORLG00000010761	slirp	64	55.422	Oryzias_latipes
ENSPPAG00000040710	-	72	59.701	ENSORLG00020022188	slirp	83	56.627	Oryzias_latipes_hni
ENSPPAG00000040710	-	95	50.000	ENSORLG00015020171	slirp	84	54.118	Oryzias_latipes_hsok
ENSPPAG00000040710	-	75	57.831	ENSOMEG00000019321	slirp	83	57.831	Oryzias_melastigma
ENSPPAG00000040710	-	98	81.250	ENSPPRG00000014350	SLIRP	83	81.707	Panthera_pardus
ENSPPAG00000040710	-	98	81.250	ENSPTIG00000014196	SLIRP	83	81.707	Panthera_tigris_altaica
ENSPPAG00000040710	-	100	100.000	ENSPTRG00000030691	SLIRP	100	100.000	Pan_troglodytes
ENSPPAG00000040710	-	100	87.097	ENSPANG00000026323	SLIRP	85	87.342	Papio_anubis
ENSPPAG00000040710	-	62	58.621	ENSPKIG00000008831	slirp	69	54.286	Paramormyrops_kingsleyae
ENSPPAG00000040710	-	73	69.118	ENSPMGG00000010541	slirp	87	63.158	Periophthalmus_magnuspinnatus
ENSPPAG00000040710	-	74	76.812	ENSPEMG00000013234	Slirp	75	71.053	Peromyscus_maniculatus_bairdii
ENSPPAG00000040710	-	65	53.333	ENSPMAG00000009355	slirp	76	50.000	Petromyzon_marinus
ENSPPAG00000040710	-	95	59.091	ENSPCIG00000026842	-	74	69.565	Phascolarctos_cinereus
ENSPPAG00000040710	-	73	61.765	ENSPFOG00000006758	slirp	86	55.814	Poecilia_formosa
ENSPPAG00000040710	-	78	56.977	ENSPLAG00000011140	slirp	85	57.647	Poecilia_latipinna
ENSPPAG00000040710	-	73	61.765	ENSPMEG00000019535	slirp	86	55.814	Poecilia_mexicana
ENSPPAG00000040710	-	73	61.765	ENSPREG00000011673	slirp	86	55.814	Poecilia_reticulata
ENSPPAG00000040710	-	100	88.073	ENSPPYG00000006030	SLIRP	87	87.368	Pongo_abelii
ENSPPAG00000040710	-	96	77.528	ENSPCOG00000015159	SLIRP	88	74.545	Propithecus_coquereli
ENSPPAG00000040710	-	73	64.706	ENSPNAG00000008633	slirp	90	56.180	Pygocentrus_nattereri
ENSPPAG00000040710	-	100	87.097	ENSRBIG00000032222	-	85	86.076	Rhinopithecus_bieti
ENSPPAG00000040710	-	92	84.884	ENSRBIG00000031396	-	72	84.722	Rhinopithecus_bieti
ENSPPAG00000040710	-	96	80.899	ENSRBIG00000035817	-	86	76.087	Rhinopithecus_bieti
ENSPPAG00000040710	-	100	81.633	ENSRBIG00000032998	-	78	79.762	Rhinopithecus_bieti
ENSPPAG00000040710	-	100	86.022	ENSRROG00000036656	-	85	86.076	Rhinopithecus_roxellana
ENSPPAG00000040710	-	100	82.292	ENSRROG00000017133	-	85	81.707	Rhinopithecus_roxellana
ENSPPAG00000040710	-	92	83.721	ENSRROG00000035604	-	72	83.333	Rhinopithecus_roxellana
ENSPPAG00000040710	-	96	85.393	ENSRROG00000041312	-	77	84.615	Rhinopithecus_roxellana
ENSPPAG00000040710	-	100	82.258	ENSSBOG00000020014	SLIRP	88	83.636	Saimiri_boliviensis_boliviensis
ENSPPAG00000040710	-	91	51.515	ENSSFOG00015011165	slirp	88	54.023	Scleropages_formosus
ENSPPAG00000040710	-	85	41.772	ENSSMAG00000012930	slirp	73	47.297	Scophthalmus_maximus
ENSPPAG00000040710	-	73	61.765	ENSSDUG00000021883	slirp	55	54.762	Seriola_dumerili
ENSPPAG00000040710	-	73	61.765	ENSSLDG00000023136	slirp	75	54.762	Seriola_lalandi_dorsalis
ENSPPAG00000040710	-	86	61.728	ENSSPUG00000009346	SLIRP	72	64.789	Sphenodon_punctatus
ENSPPAG00000040710	-	72	56.716	ENSSPAG00000013477	slirp	78	55.128	Stegastes_partitus
ENSPPAG00000040710	-	95	75.000	ENSSSCG00000028167	SLIRP	87	67.010	Sus_scrofa
ENSPPAG00000040710	-	72	55.224	ENSTGUG00000012337	SLIRP	66	54.286	Taeniopygia_guttata
ENSPPAG00000040710	-	95	48.315	ENSTRUG00000020127	slirp	88	50.562	Takifugu_rubripes
ENSPPAG00000040710	-	95	79.545	ENSUAMG00000022445	SLIRP	87	72.165	Ursus_americanus
ENSPPAG00000040710	-	95	79.545	ENSUMAG00000007166	SLIRP	87	72.165	Ursus_maritimus
ENSPPAG00000040710	-	100	70.642	ENSVPAG00000001781	SLIRP	87	70.526	Vicugna_pacos
ENSPPAG00000040710	-	83	77.922	ENSVVUG00000004436	SLIRP	86	70.833	Vulpes_vulpes
ENSPPAG00000040710	-	73	63.235	ENSXETG00000030343	SLIRP	80	63.380	Xenopus_tropicalis
ENSPPAG00000040710	-	75	61.429	ENSXCOG00000009422	slirp	85	56.471	Xiphophorus_couchianus
ENSPPAG00000040710	-	75	62.857	ENSXMAG00000015655	slirp	85	58.824	Xiphophorus_maculatus