EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000040796 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 1059 bases
Position: chr8:97729093-97730151
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000036093	zf-CCHC	PF00098.23	6.2e-05	1	1
ENSPPAP00000036081	zf-CCHC	PF00098.23	6.6e-05	1	1
ENSPPAP00000036081	RRM_1	PF00076.22	1.4e-10	1	1
ENSPPAP00000036093	RRM_1	PF00076.22	2.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000058983	-	870	-	ENSPPAP00000036093	289 (aa)	-	A0A2R9C5C6
ENSPPAT00000058971	-	909	-	ENSPPAP00000036081	302 (aa)	-	A0A2R9C2C7

Gene Model

Click here to download ENSPPAG00000040796's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000040796's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000040796	-	100	72.807	ENSPPAG00000015125	RBM4B	97	78.049
ENSPPAG00000040796	-	100	64.265	ENSPPAG00000033403	RBM14	97	75.610

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000040796	-	100	53.959	ENSACAG00000007777	-	99	54.545	Anolis_carolinensis
ENSPPAG00000040796	-	100	59.451	ENSCCAG00000029710	-	95	59.451	Cebus_capucinus
ENSPPAG00000040796	-	59	74.510	ENSCANG00000043380	-	98	74.510	Colobus_angolensis_palliatus
ENSPPAG00000040796	-	100	95.286	ENSGGOG00000025398	-	98	95.286	Gorilla_gorilla
ENSPPAG00000040796	-	98	53.205	ENSHGLG00000007536	-	99	52.885	Heterocephalus_glaber_female
ENSPPAG00000040796	-	98	53.016	ENSHGLG00100011767	-	99	53.016	Heterocephalus_glaber_male
ENSPPAG00000040796	-	64	38.889	ENSLACG00000009547	-	82	38.806	Latimeria_chalumnae
ENSPPAG00000040796	-	60	77.436	ENSMFAG00000041731	-	86	77.436	Macaca_fascicularis
ENSPPAG00000040796	-	95	70.455	ENSMMUG00000003366	-	94	68.506	Macaca_mulatta
ENSPPAG00000040796	-	60	77.436	ENSMNEG00000036946	-	86	77.436	Macaca_nemestrina
ENSPPAG00000040796	-	60	72.464	ENSMLEG00000038589	-	91	72.464	Mandrillus_leucophaeus
ENSPPAG00000040796	-	100	75.556	ENSNLEG00000027654	-	98	78.247	Nomascus_leucogenys
ENSPPAG00000040796	-	100	99.308	ENSPTRG00000046155	-	100	99.308	Pan_troglodytes
ENSPPAG00000040796	-	60	71.014	ENSPANG00000018676	-	91	71.014	Papio_anubis
ENSPPAG00000040796	-	100	66.279	ENSPCAG00000003414	-	99	68.314	Procavia_capensis
ENSPPAG00000040796	-	93	60.828	ENSRBIG00000035855	-	97	67.320	Rhinopithecus_bieti
ENSPPAG00000040796	-	98	62.500	ENSRROG00000038956	-	97	67.320	Rhinopithecus_roxellana
ENSPPAG00000040796	-	79	60.142	ENSSHAG00000008133	-	99	61.922	Sarcophilus_harrisii
ENSPPAG00000040796	-	100	71.637	ENSSSCG00000038304	-	99	73.392	Sus_scrofa