EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPAG00000041090 (Gene tree)
Gene ID: 100979001
Gene Symbol: SRRT
Alias: -
Full Name: serrate%2C RNA effector molecule
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Plus strand
Length: 13770 bases
Position: chr7:106296488-106310257
Accession: 100979001
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000036933	ARS2	PF04959.13	2e-90	1	1
ENSPPAP00000037001	ARS2	PF04959.13	1.1e-73	1	1
ENSPPAP00000036996	ARS2	PF04959.13	1.2e-73	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000059892	SRRT-202	2598	-	ENSPPAP00000036996	865 (aa)	-	A0A2R9C4Y6
ENSPPAT00000059828	SRRT-201	3097	XM_003812897	ENSPPAP00000036933	871 (aa)	XP_003812945	A0A2R9C7P4
ENSPPAT00000059897	SRRT-203	2538	-	ENSPPAP00000037001	845 (aa)	-	A0A2R9C4Z1

Gene Model

Click here to download ENSPPAG00000041090's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000041090's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000041090	SRRT	100	99.885	ENSG00000087087	SRRT	100	99.885	Homo_sapiens
ENSPPAG00000041090	SRRT	53	76.190	ENSAPOG00000002304	srrt	51	76.190	Acanthochromis_polyacanthus
ENSPPAG00000041090	SRRT	100	94.667	ENSAMEG00000014506	SRRT	100	94.667	Ailuropoda_melanoleuca
ENSPPAG00000041090	SRRT	79	75.974	ENSACIG00000015795	srrt	90	75.974	Amphilophus_citrinellus
ENSPPAG00000041090	SRRT	84	76.407	ENSAOCG00000009693	srrt	85	76.407	Amphiprion_ocellaris
ENSPPAG00000041090	SRRT	93	54.862	ENSAOCG00000009189	-	96	56.286	Amphiprion_ocellaris
ENSPPAG00000041090	SRRT	93	54.862	ENSAPEG00000020016	-	96	56.286	Amphiprion_percula
ENSPPAG00000041090	SRRT	79	75.974	ENSAPEG00000003646	srrt	85	75.974	Amphiprion_percula
ENSPPAG00000041090	SRRT	55	61.616	ENSATEG00000003652	-	85	64.076	Anabas_testudineus
ENSPPAG00000041090	SRRT	81	73.810	ENSATEG00000014425	srrt	88	74.675	Anabas_testudineus
ENSPPAG00000041090	SRRT	95	77.262	ENSACAG00000001014	SRRT	96	77.370	Anolis_carolinensis
ENSPPAG00000041090	SRRT	100	98.743	ENSANAG00000031718	SRRT	100	98.743	Aotus_nancymaae
ENSPPAG00000041090	SRRT	53	74.675	ENSACLG00000013156	srrt	50	74.675	Astatotilapia_calliptera
ENSPPAG00000041090	SRRT	55	60.896	ENSACLG00000009423	-	52	63.617	Astatotilapia_calliptera
ENSPPAG00000041090	SRRT	52	75.930	ENSAMXG00000016671	srrt	50	75.930	Astyanax_mexicanus
ENSPPAG00000041090	SRRT	100	96.689	ENSBTAG00000001134	SRRT	100	96.689	Bos_taurus
ENSPPAG00000041090	SRRT	62	47.656	WBGene00017085	E01A2.2	85	42.857	Caenorhabditis_elegans
ENSPPAG00000041090	SRRT	100	98.400	ENSCJAG00000014917	SRRT	100	98.400	Callithrix_jacchus
ENSPPAG00000041090	SRRT	100	97.831	ENSCAFG00000023538	SRRT	100	97.831	Canis_familiaris
ENSPPAG00000041090	SRRT	100	98.394	ENSCAFG00020013358	SRRT	100	98.394	Canis_lupus_dingo
ENSPPAG00000041090	SRRT	100	96.918	ENSCHIG00000010495	SRRT	100	96.918	Capra_hircus
ENSPPAG00000041090	SRRT	97	94.654	ENSTSYG00000036426	SRRT	99	94.654	Carlito_syrichta
ENSPPAG00000041090	SRRT	95	96.871	ENSCAPG00000013586	SRRT	100	96.871	Cavia_aperea
ENSPPAG00000041090	SRRT	100	97.719	ENSCPOG00000001739	SRRT	100	97.719	Cavia_porcellus
ENSPPAG00000041090	SRRT	100	98.857	ENSCCAG00000015877	SRRT	100	98.857	Cebus_capucinus
ENSPPAG00000041090	SRRT	100	99.312	ENSCATG00000036306	SRRT	100	99.312	Cercocebus_atys
ENSPPAG00000041090	SRRT	100	98.174	ENSCLAG00000007568	SRRT	100	98.174	Chinchilla_lanigera
ENSPPAG00000041090	SRRT	100	98.973	ENSCSAG00000017996	SRRT	100	98.973	Chlorocebus_sabaeus
ENSPPAG00000041090	SRRT	56	94.118	ENSCHOG00000007815	SRRT	69	93.370	Choloepus_hoffmanni
ENSPPAG00000041090	SRRT	76	82.692	ENSCPBG00000011553	SRRT	85	81.004	Chrysemys_picta_bellii
ENSPPAG00000041090	SRRT	100	43.062	ENSCING00000003506	-	54	52.292	Ciona_intestinalis
ENSPPAG00000041090	SRRT	100	40.432	ENSCSAVG00000008394	-	89	54.039	Ciona_savignyi
ENSPPAG00000041090	SRRT	100	99.427	ENSCANG00000034556	SRRT	100	99.427	Colobus_angolensis_palliatus
ENSPPAG00000041090	SRRT	100	96.811	ENSCGRG00001001594	Srrt	100	96.811	Cricetulus_griseus_chok1gshd
ENSPPAG00000041090	SRRT	100	89.432	ENSCGRG00000007292	Srrt	100	89.432	Cricetulus_griseus_crigri
ENSPPAG00000041090	SRRT	53	66.667	ENSCSEG00000017878	srrt	50	67.527	Cynoglossus_semilaevis
ENSPPAG00000041090	SRRT	90	55.019	ENSCVAG00000017344	-	95	54.324	Cyprinodon_variegatus
ENSPPAG00000041090	SRRT	97	62.850	ENSCVAG00000019848	srrt	96	65.233	Cyprinodon_variegatus
ENSPPAG00000041090	SRRT	53	76.674	ENSDARG00000017762	srrt	51	77.538	Danio_rerio
ENSPPAG00000041090	SRRT	100	97.489	ENSDNOG00000003851	SRRT	100	97.489	Dasypus_novemcinctus
ENSPPAG00000041090	SRRT	98	94.063	ENSDORG00000005584	Srrt	98	94.296	Dipodomys_ordii
ENSPPAG00000041090	SRRT	88	50.294	FBgn0033062	Ars2	67	53.066	Drosophila_melanogaster
ENSPPAG00000041090	SRRT	86	93.860	ENSETEG00000016175	SRRT	82	93.860	Echinops_telfairi
ENSPPAG00000041090	SRRT	63	62.500	ENSEBUG00000008517	-	76	65.278	Eptatretus_burgeri
ENSPPAG00000041090	SRRT	100	97.717	ENSEASG00005016956	SRRT	100	97.717	Equus_asinus_asinus
ENSPPAG00000041090	SRRT	100	97.831	ENSECAG00000012292	SRRT	100	97.831	Equus_caballus
ENSPPAG00000041090	SRRT	85	97.727	ENSEEUG00000009117	SRRT	93	97.727	Erinaceus_europaeus
ENSPPAG00000041090	SRRT	93	55.595	ENSELUG00000021216	-	53	64.301	Esox_lucius
ENSPPAG00000041090	SRRT	100	98.059	ENSFCAG00000006855	SRRT	100	98.059	Felis_catus
ENSPPAG00000041090	SRRT	57	53.947	ENSFALG00000007524	-	85	66.667	Ficedula_albicollis
ENSPPAG00000041090	SRRT	100	94.266	ENSFDAG00000021347	SRRT	100	94.266	Fukomys_damarensis
ENSPPAG00000041090	SRRT	75	74.672	ENSFHEG00000002756	srrt	89	74.699	Fundulus_heteroclitus
ENSPPAG00000041090	SRRT	55	55.215	ENSFHEG00000004105	-	93	56.170	Fundulus_heteroclitus
ENSPPAG00000041090	SRRT	97	58.295	ENSGMOG00000018619	srrt	51	70.538	Gadus_morhua
ENSPPAG00000041090	SRRT	93	53.554	ENSGAFG00000020383	-	54	61.194	Gambusia_affinis
ENSPPAG00000041090	SRRT	53	74.892	ENSGAFG00000005423	srrt	51	74.892	Gambusia_affinis
ENSPPAG00000041090	SRRT	93	52.420	ENSGACG00000001100	-	53	61.311	Gasterosteus_aculeatus
ENSPPAG00000041090	SRRT	95	64.037	ENSGACG00000020387	srrt	51	74.624	Gasterosteus_aculeatus
ENSPPAG00000041090	SRRT	100	99.315	ENSGGOG00000001508	SRRT	99	99.315	Gorilla_gorilla
ENSPPAG00000041090	SRRT	53	74.892	ENSHBUG00000002942	srrt	50	74.892	Haplochromis_burtoni
ENSPPAG00000041090	SRRT	100	97.267	ENSHGLG00000008344	Srrt	100	97.267	Heterocephalus_glaber_female
ENSPPAG00000041090	SRRT	100	98.165	ENSHGLG00100018857	Srrt	100	98.165	Heterocephalus_glaber_male
ENSPPAG00000041090	SRRT	93	52.463	ENSHCOG00000008904	-	56	61.242	Hippocampus_comes
ENSPPAG00000041090	SRRT	98	63.001	ENSHCOG00000005403	srrt	56	71.800	Hippocampus_comes
ENSPPAG00000041090	SRRT	100	98.394	ENSSTOG00000013776	SRRT	100	98.394	Ictidomys_tridecemlineatus
ENSPPAG00000041090	SRRT	100	96.560	ENSJJAG00000010446	Srrt	100	96.560	Jaculus_jaculus
ENSPPAG00000041090	SRRT	97	62.322	ENSKMAG00000013599	srrt	54	74.675	Kryptolebias_marmoratus
ENSPPAG00000041090	SRRT	93	53.800	ENSKMAG00000008468	-	53	62.319	Kryptolebias_marmoratus
ENSPPAG00000041090	SRRT	85	71.158	ENSLBEG00000016308	srrt	89	72.899	Labrus_bergylta
ENSPPAG00000041090	SRRT	97	62.884	ENSLACG00000001089	SRRT	96	65.176	Latimeria_chalumnae
ENSPPAG00000041090	SRRT	83	68.212	ENSLOCG00000013658	srrt	52	69.481	Lepisosteus_oculatus
ENSPPAG00000041090	SRRT	100	97.603	ENSLAFG00000007725	SRRT	100	97.603	Loxodonta_africana
ENSPPAG00000041090	SRRT	100	99.541	ENSMFAG00000033745	SRRT	100	99.541	Macaca_fascicularis
ENSPPAG00000041090	SRRT	100	98.973	ENSMMUG00000021255	SRRT	100	98.973	Macaca_mulatta
ENSPPAG00000041090	SRRT	100	98.973	ENSMNEG00000041864	SRRT	100	98.973	Macaca_nemestrina
ENSPPAG00000041090	SRRT	100	99.541	ENSMLEG00000029479	SRRT	100	99.541	Mandrillus_leucophaeus
ENSPPAG00000041090	SRRT	53	73.753	ENSMAMG00000014311	srrt	51	75.054	Mastacembelus_armatus
ENSPPAG00000041090	SRRT	93	54.448	ENSMAMG00000010681	-	96	57.076	Mastacembelus_armatus
ENSPPAG00000041090	SRRT	55	60.896	ENSMZEG00005028002	-	52	63.617	Maylandia_zebra
ENSPPAG00000041090	SRRT	53	74.675	ENSMZEG00005016135	srrt	50	74.675	Maylandia_zebra
ENSPPAG00000041090	SRRT	100	96.575	ENSMAUG00000011386	Srrt	100	96.575	Mesocricetus_auratus
ENSPPAG00000041090	SRRT	100	97.945	ENSMICG00000009471	SRRT	100	97.945	Microcebus_murinus
ENSPPAG00000041090	SRRT	100	96.800	ENSMOCG00000001971	Srrt	100	96.800	Microtus_ochrogaster
ENSPPAG00000041090	SRRT	87	55.541	ENSMMOG00000011137	-	55	65.665	Mola_mola
ENSPPAG00000041090	SRRT	97	63.817	ENSMMOG00000016399	srrt	54	74.624	Mola_mola
ENSPPAG00000041090	SRRT	54	88.075	ENSMODG00000004862	SRRT	90	89.189	Monodelphis_domestica
ENSPPAG00000041090	SRRT	58	49.608	ENSMALG00000005567	-	84	52.711	Monopterus_albus
ENSPPAG00000041090	SRRT	90	62.239	ENSMALG00000018604	srrt	80	71.367	Monopterus_albus
ENSPPAG00000041090	SRRT	100	97.032	MGP_CAROLIEiJ_G0027870	Srrt	100	99.627	Mus_caroli
ENSPPAG00000041090	SRRT	100	97.032	ENSMUSG00000037364	Srrt	99	99.627	Mus_musculus
ENSPPAG00000041090	SRRT	100	96.804	MGP_PahariEiJ_G0024456	Srrt	100	99.254	Mus_pahari
ENSPPAG00000041090	SRRT	100	97.032	MGP_SPRETEiJ_G0028875	Srrt	100	99.627	Mus_spretus
ENSPPAG00000041090	SRRT	100	97.945	ENSMPUG00000015839	SRRT	100	97.945	Mustela_putorius_furo
ENSPPAG00000041090	SRRT	100	97.374	ENSMLUG00000009975	SRRT	100	97.374	Myotis_lucifugus
ENSPPAG00000041090	SRRT	100	96.918	ENSNGAG00000023715	Srrt	100	96.918	Nannospalax_galili
ENSPPAG00000041090	SRRT	53	73.536	ENSNBRG00000019100	srrt	52	73.536	Neolamprologus_brichardi
ENSPPAG00000041090	SRRT	95	90.085	ENSNLEG00000011987	SRRT	100	90.085	Nomascus_leucogenys
ENSPPAG00000041090	SRRT	98	74.825	ENSMEUG00000011941	SRRT	98	75.291	Notamacropus_eugenii
ENSPPAG00000041090	SRRT	64	100.000	ENSOPRG00000002502	-	67	100.000	Ochotona_princeps
ENSPPAG00000041090	SRRT	100	97.592	ENSODEG00000016856	SRRT	100	97.592	Octodon_degus
ENSPPAG00000041090	SRRT	93	53.901	ENSONIG00000016080	-	52	63.347	Oreochromis_niloticus
ENSPPAG00000041090	SRRT	53	75.108	ENSONIG00000004242	srrt	52	74.892	Oreochromis_niloticus
ENSPPAG00000041090	SRRT	96	65.313	ENSORLG00000008120	srrt	52	74.242	Oryzias_latipes
ENSPPAG00000041090	SRRT	96	65.509	ENSORLG00020003058	srrt	52	74.026	Oryzias_latipes_hni
ENSPPAG00000041090	SRRT	96	65.585	ENSORLG00015008062	srrt	52	74.026	Oryzias_latipes_hsok
ENSPPAG00000041090	SRRT	96	65.585	ENSOMEG00000003155	srrt	93	70.675	Oryzias_melastigma
ENSPPAG00000041090	SRRT	93	56.235	ENSOMEG00000006963	-	53	64.530	Oryzias_melastigma
ENSPPAG00000041090	SRRT	100	98.288	ENSOGAG00000017242	SRRT	100	98.288	Otolemur_garnettii
ENSPPAG00000041090	SRRT	100	97.477	ENSOARG00000015645	SRRT	100	97.477	Ovis_aries
ENSPPAG00000041090	SRRT	100	98.050	ENSPPRG00000009557	SRRT	100	98.050	Panthera_pardus
ENSPPAG00000041090	SRRT	100	97.945	ENSPTIG00000014355	SRRT	100	97.945	Panthera_tigris_altaica
ENSPPAG00000041090	SRRT	100	100.000	ENSPTRG00000019511	SRRT	100	100.000	Pan_troglodytes
ENSPPAG00000041090	SRRT	97	96.512	ENSPANG00000020763	SRRT	98	96.512	Papio_anubis
ENSPPAG00000041090	SRRT	96	68.831	ENSPKIG00000005434	srrt	54	79.526	Paramormyrops_kingsleyae
ENSPPAG00000041090	SRRT	94	67.633	ENSPKIG00000022212	-	96	67.180	Paramormyrops_kingsleyae
ENSPPAG00000041090	SRRT	95	80.810	ENSPSIG00000016311	SRRT	96	81.020	Pelodiscus_sinensis
ENSPPAG00000041090	SRRT	83	70.886	ENSPMGG00000002841	srrt	56	74.675	Periophthalmus_magnuspinnatus
ENSPPAG00000041090	SRRT	100	96.560	ENSPEMG00000010834	Srrt	100	96.560	Peromyscus_maniculatus_bairdii
ENSPPAG00000041090	SRRT	96	55.217	ENSPMAG00000009614	-	55	64.496	Petromyzon_marinus
ENSPPAG00000041090	SRRT	98	91.405	ENSPCIG00000000816	SRRT	98	92.218	Phascolarctos_cinereus
ENSPPAG00000041090	SRRT	53	74.946	ENSPFOG00000005704	srrt	51	74.946	Poecilia_formosa
ENSPPAG00000041090	SRRT	93	52.999	ENSPFOG00000016554	-	54	60.981	Poecilia_formosa
ENSPPAG00000041090	SRRT	97	62.014	ENSPLAG00000021992	srrt	51	74.459	Poecilia_latipinna
ENSPPAG00000041090	SRRT	93	52.876	ENSPLAG00000004526	-	55	60.638	Poecilia_latipinna
ENSPPAG00000041090	SRRT	79	74.514	ENSPMEG00000001182	srrt	85	74.514	Poecilia_mexicana
ENSPPAG00000041090	SRRT	90	52.146	ENSPMEG00000001520	-	53	59.910	Poecilia_mexicana
ENSPPAG00000041090	SRRT	97	63.018	ENSPREG00000022308	srrt	51	74.946	Poecilia_reticulata
ENSPPAG00000041090	SRRT	100	88.800	ENSPPYG00000017432	SRRT	100	88.800	Pongo_abelii
ENSPPAG00000041090	SRRT	100	93.439	ENSPCAG00000001621	SRRT	100	93.439	Procavia_capensis
ENSPPAG00000041090	SRRT	100	98.174	ENSPCOG00000025751	SRRT	100	98.174	Propithecus_coquereli
ENSPPAG00000041090	SRRT	77	90.000	ENSPVAG00000000834	SRRT	100	90.000	Pteropus_vampyrus
ENSPPAG00000041090	SRRT	53	74.675	ENSPNYG00000018710	srrt	52	74.675	Pundamilia_nyererei
ENSPPAG00000041090	SRRT	77	70.732	ENSPNAG00000010629	srrt	77	64.130	Pygocentrus_nattereri
ENSPPAG00000041090	SRRT	54	84.713	ENSRNOG00000048277	AABR07035787.1	93	84.713	Rattus_norvegicus
ENSPPAG00000041090	SRRT	100	98.973	ENSRBIG00000035718	SRRT	100	98.973	Rhinopithecus_bieti
ENSPPAG00000041090	SRRT	100	98.973	ENSRROG00000030622	SRRT	100	98.973	Rhinopithecus_roxellana
ENSPPAG00000041090	SRRT	100	98.857	ENSSBOG00000033570	SRRT	100	98.857	Saimiri_boliviensis_boliviensis
ENSPPAG00000041090	SRRT	72	87.717	ENSSHAG00000007349	-	100	88.346	Sarcophilus_harrisii
ENSPPAG00000041090	SRRT	94	70.070	ENSSFOG00015017293	srrt	96	67.837	Scleropages_formosus
ENSPPAG00000041090	SRRT	53	61.571	ENSSMAG00000018195	-	98	52.588	Scophthalmus_maximus
ENSPPAG00000041090	SRRT	97	63.310	ENSSMAG00000015342	srrt	54	75.054	Scophthalmus_maximus
ENSPPAG00000041090	SRRT	55	54.021	ENSSDUG00000002051	-	93	54.681	Seriola_dumerili
ENSPPAG00000041090	SRRT	53	74.892	ENSSDUG00000012049	srrt	53	75.758	Seriola_dumerili
ENSPPAG00000041090	SRRT	84	74.675	ENSSLDG00000017477	srrt	85	75.541	Seriola_lalandi_dorsalis
ENSPPAG00000041090	SRRT	85	51.938	ENSSPAG00000018943	-	93	56.867	Stegastes_partitus
ENSPPAG00000041090	SRRT	53	75.054	ENSSPAG00000005665	srrt	51	75.054	Stegastes_partitus
ENSPPAG00000041090	SRRT	95	95.405	ENSSSCG00000024789	SRRT	100	95.405	Sus_scrofa
ENSPPAG00000041090	SRRT	92	52.104	ENSTRUG00000000023	-	51	60.135	Takifugu_rubripes
ENSPPAG00000041090	SRRT	96	64.361	ENSTRUG00000016075	srrt	96	62.916	Takifugu_rubripes
ENSPPAG00000041090	SRRT	93	49.703	ENSTNIG00000003111	-	53	61.620	Tetraodon_nigroviridis
ENSPPAG00000041090	SRRT	74	62.462	ENSTNIG00000011779	srrt	100	61.654	Tetraodon_nigroviridis
ENSPPAG00000041090	SRRT	68	96.382	ENSTBEG00000005212	SRRT	66	96.382	Tupaia_belangeri
ENSPPAG00000041090	SRRT	100	97.374	ENSTTRG00000011104	SRRT	100	97.374	Tursiops_truncatus
ENSPPAG00000041090	SRRT	95	97.967	ENSUAMG00000027997	SRRT	98	97.967	Ursus_americanus
ENSPPAG00000041090	SRRT	100	98.059	ENSUMAG00000011295	SRRT	100	98.059	Ursus_maritimus
ENSPPAG00000041090	SRRT	100	97.831	ENSVVUG00000023572	SRRT	100	97.831	Vulpes_vulpes
ENSPPAG00000041090	SRRT	72	81.529	ENSXETG00000025124	srrt	84	76.180	Xenopus_tropicalis
ENSPPAG00000041090	SRRT	53	50.540	ENSXCOG00000013105	-	90	51.078	Xiphophorus_couchianus
ENSPPAG00000041090	SRRT	80	75.325	ENSXMAG00000007627	srrt	93	71.519	Xiphophorus_maculatus
ENSPPAG00000041090	SRRT	93	53.129	ENSXMAG00000002090	-	54	61.242	Xiphophorus_maculatus