EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000041730 (Gene tree)
Gene ID: 100982894
Gene Symbol: RBM28
Alias: -
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 33499 bases
Position: chr7:132955078-132988576
Accession: 100982894
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000038007	RRM_1	PF00076.22	1.4e-56	1	3
ENSPPAP00000038007	RRM_1	PF00076.22	1.4e-56	2	3
ENSPPAP00000038007	RRM_1	PF00076.22	1.4e-56	3	3
ENSPPAP00000038015	RRM_1	PF00076.22	9.2e-29	1	2
ENSPPAP00000038015	RRM_1	PF00076.22	9.2e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000060918	RBM28-202	1863	-	ENSPPAP00000038015	620 (aa)	-	A0A2R9C7V5
ENSPPAT00000060910	RBM28-201	2831	XM_003806043	ENSPPAP00000038007	761 (aa)	XP_003806091	A0A2R9CIF2

Gene Model

Click here to download ENSPPAG00000041730's gene model file

Pathways

Pathway ID	Pathway Name	Source
pps03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000041730's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000041730	RBM28	68	31.579	ENSPPAG00000037498	-	50	31.176

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000041730	RBM28	100	100.000	ENSG00000106344	RBM28	100	100.000	Homo_sapiens
ENSPPAG00000041730	RBM28	76	61.538	ENSAPOG00000015512	rbm28	100	51.282	Acanthochromis_polyacanthus
ENSPPAG00000041730	RBM28	100	93.478	ENSAMEG00000004776	RBM28	92	93.478	Ailuropoda_melanoleuca
ENSPPAG00000041730	RBM28	68	55.000	ENSACIG00000023153	rbm28	100	51.357	Amphilophus_citrinellus
ENSPPAG00000041730	RBM28	76	62.500	ENSAOCG00000000462	rbm28	100	51.066	Amphiprion_ocellaris
ENSPPAG00000041730	RBM28	76	62.500	ENSAPEG00000012996	rbm28	100	51.253	Amphiprion_percula
ENSPPAG00000041730	RBM28	77	65.000	ENSATEG00000001672	rbm28	72	65.000	Anabas_testudineus
ENSPPAG00000041730	RBM28	100	100.000	ENSANAG00000033922	RBM28	100	92.782	Aotus_nancymaae
ENSPPAG00000041730	RBM28	100	52.632	ENSACLG00000025024	rbm28	100	48.702	Astatotilapia_calliptera
ENSPPAG00000041730	RBM28	70	59.268	ENSAMXG00000000763	rbm28	99	59.009	Astyanax_mexicanus
ENSPPAG00000041730	RBM28	100	83.617	ENSBTAG00000017001	RBM28	100	100.000	Bos_taurus
ENSPPAG00000041730	RBM28	100	100.000	ENSCJAG00000017731	RBM28	100	92.257	Callithrix_jacchus
ENSPPAG00000041730	RBM28	100	95.000	ENSCAFG00000001667	RBM28	100	84.797	Canis_familiaris
ENSPPAG00000041730	RBM28	100	95.000	ENSCAFG00020021648	RBM28	100	84.797	Canis_lupus_dingo
ENSPPAG00000041730	RBM28	100	100.000	ENSCHIG00000014146	RBM28	100	84.010	Capra_hircus
ENSPPAG00000041730	RBM28	100	85.471	ENSTSYG00000002892	RBM28	100	95.000	Carlito_syrichta
ENSPPAG00000041730	RBM28	84	61.250	ENSCAPG00000013218	RBM28	100	61.094	Cavia_aperea
ENSPPAG00000041730	RBM28	100	95.000	ENSCPOG00000006253	RBM28	100	83.093	Cavia_porcellus
ENSPPAG00000041730	RBM28	100	100.000	ENSCCAG00000035105	RBM28	100	93.176	Cebus_capucinus
ENSPPAG00000041730	RBM28	100	97.500	ENSCATG00000040497	RBM28	100	97.500	Cercocebus_atys
ENSPPAG00000041730	RBM28	100	79.685	ENSCLAG00000003707	RBM28	90	95.000	Chinchilla_lanigera
ENSPPAG00000041730	RBM28	100	100.000	ENSCSAG00000010161	RBM28	100	94.751	Chlorocebus_sabaeus
ENSPPAG00000041730	RBM28	55	100.000	ENSCHOG00000001994	-	63	88.710	Choloepus_hoffmanni
ENSPPAG00000041730	RBM28	62	61.048	ENSCPBG00000018088	RBM28	87	59.743	Chrysemys_picta_bellii
ENSPPAG00000041730	RBM28	73	41.393	ENSCING00000009238	-	56	41.188	Ciona_intestinalis
ENSPPAG00000041730	RBM28	54	44.023	ENSCSAVG00000007149	-	94	44.083	Ciona_savignyi
ENSPPAG00000041730	RBM28	88	100.000	ENSCANG00000038397	RBM28	100	100.000	Colobus_angolensis_palliatus
ENSPPAG00000041730	RBM28	86	100.000	ENSCGRG00001021278	Rbm28	82	100.000	Cricetulus_griseus_chok1gshd
ENSPPAG00000041730	RBM28	100	100.000	ENSCGRG00000005098	Rbm28	82	100.000	Cricetulus_griseus_crigri
ENSPPAG00000041730	RBM28	100	48.917	ENSCSEG00000004212	rbm28	100	49.491	Cynoglossus_semilaevis
ENSPPAG00000041730	RBM28	85	55.111	ENSCVAG00000010493	rbm28	82	65.000	Cyprinodon_variegatus
ENSPPAG00000041730	RBM28	59	48.052	ENSDARG00000025332	rbm28	100	46.753	Danio_rerio
ENSPPAG00000041730	RBM28	100	100.000	ENSDNOG00000001124	RBM28	100	84.928	Dasypus_novemcinctus
ENSPPAG00000041730	RBM28	79	81.653	ENSDORG00000004184	Rbm28	97	81.653	Dipodomys_ordii
ENSPPAG00000041730	RBM28	72	36.547	FBgn0260456	CG4806	51	42.776	Drosophila_melanogaster
ENSPPAG00000041730	RBM28	100	71.094	ENSETEG00000007130	RBM28	99	71.354	Echinops_telfairi
ENSPPAG00000041730	RBM28	82	48.691	ENSEBUG00000004419	rbm28	93	48.691	Eptatretus_burgeri
ENSPPAG00000041730	RBM28	100	97.500	ENSEASG00005008528	RBM28	100	86.180	Equus_asinus_asinus
ENSPPAG00000041730	RBM28	100	97.500	ENSECAG00000007745	RBM28	100	85.417	Equus_caballus
ENSPPAG00000041730	RBM28	100	95.000	ENSEEUG00000002389	RBM28	82	95.000	Erinaceus_europaeus
ENSPPAG00000041730	RBM28	100	62.500	ENSELUG00000020602	rbm28	100	52.363	Esox_lucius
ENSPPAG00000041730	RBM28	100	100.000	ENSFCAG00000000946	RBM28	100	100.000	Felis_catus
ENSPPAG00000041730	RBM28	100	92.500	ENSFDAG00000010169	RBM28	100	85.059	Fukomys_damarensis
ENSPPAG00000041730	RBM28	81	52.740	ENSGMOG00000007091	rbm28	75	50.000	Gadus_morhua
ENSPPAG00000041730	RBM28	71	54.889	ENSGAFG00000004802	rbm28	97	53.947	Gambusia_affinis
ENSPPAG00000041730	RBM28	75	65.714	ENSGACG00000012612	rbm28	82	52.515	Gasterosteus_aculeatus
ENSPPAG00000041730	RBM28	81	70.443	ENSGAGG00000008873	RBM28	80	79.670	Gopherus_agassizii
ENSPPAG00000041730	RBM28	95	98.615	ENSGGOG00000004644	RBM28	97	98.615	Gorilla_gorilla
ENSPPAG00000041730	RBM28	91	51.429	ENSHBUG00000009611	rbm28	65	56.086	Haplochromis_burtoni
ENSPPAG00000041730	RBM28	100	95.000	ENSHGLG00000005409	RBM28	100	84.666	Heterocephalus_glaber_female
ENSPPAG00000041730	RBM28	100	95.000	ENSHGLG00100016458	RBM28	100	83.748	Heterocephalus_glaber_male
ENSPPAG00000041730	RBM28	68	49.526	ENSIPUG00000007103	rbm28	97	46.626	Ictalurus_punctatus
ENSPPAG00000041730	RBM28	100	93.182	ENSSTOG00000002169	RBM28	100	85.509	Ictidomys_tridecemlineatus
ENSPPAG00000041730	RBM28	96	97.500	ENSJJAG00000022400	Rbm28	80	97.500	Jaculus_jaculus
ENSPPAG00000041730	RBM28	79	67.500	ENSKMAG00000013348	rbm28	69	67.500	Kryptolebias_marmoratus
ENSPPAG00000041730	RBM28	76	65.000	ENSLBEG00000012998	rbm28	100	50.319	Labrus_bergylta
ENSPPAG00000041730	RBM28	68	76.667	ENSLACG00000010485	-	100	56.000	Latimeria_chalumnae
ENSPPAG00000041730	RBM28	86	70.000	ENSLOCG00000015541	rbm28	80	62.371	Lepisosteus_oculatus
ENSPPAG00000041730	RBM28	100	100.000	ENSLAFG00000010717	RBM28	100	82.307	Loxodonta_africana
ENSPPAG00000041730	RBM28	100	97.500	ENSMFAG00000031036	RBM28	100	97.500	Macaca_fascicularis
ENSPPAG00000041730	RBM28	100	97.500	ENSMMUG00000007250	RBM28	100	97.500	Macaca_mulatta
ENSPPAG00000041730	RBM28	100	97.500	ENSMNEG00000036970	RBM28	100	97.500	Macaca_nemestrina
ENSPPAG00000041730	RBM28	84	96.391	ENSMLEG00000037717	RBM28	100	96.391	Mandrillus_leucophaeus
ENSPPAG00000041730	RBM28	100	62.500	ENSMAMG00000008525	rbm28	100	50.442	Mastacembelus_armatus
ENSPPAG00000041730	RBM28	93	48.774	ENSMZEG00005019625	rbm28	69	53.012	Maylandia_zebra
ENSPPAG00000041730	RBM28	100	100.000	ENSMAUG00000002263	Rbm28	82	100.000	Mesocricetus_auratus
ENSPPAG00000041730	RBM28	93	83.934	ENSMICG00000000107	RBM28	100	84.072	Microcebus_murinus
ENSPPAG00000041730	RBM28	100	100.000	ENSMOCG00000014615	Rbm28	81	100.000	Microtus_ochrogaster
ENSPPAG00000041730	RBM28	70	54.253	ENSMMOG00000008600	rbm28	99	52.282	Mola_mola
ENSPPAG00000041730	RBM28	100	87.500	ENSMODG00000015151	RBM28	100	72.727	Monodelphis_domestica
ENSPPAG00000041730	RBM28	77	65.000	ENSMALG00000006419	rbm28	68	65.000	Monopterus_albus
ENSPPAG00000041730	RBM28	100	97.500	MGP_CAROLIEiJ_G0028162	Rbm28	100	80.497	Mus_caroli
ENSPPAG00000041730	RBM28	100	97.500	ENSMUSG00000029701	Rbm28	100	80.105	Mus_musculus
ENSPPAG00000041730	RBM28	100	97.500	MGP_PahariEiJ_G0021920	Rbm28	100	80.497	Mus_pahari
ENSPPAG00000041730	RBM28	100	97.500	MGP_SPRETEiJ_G0029162	Rbm28	100	80.366	Mus_spretus
ENSPPAG00000041730	RBM28	100	100.000	ENSMPUG00000006511	RBM28	100	83.268	Mustela_putorius_furo
ENSPPAG00000041730	RBM28	100	100.000	ENSMLUG00000002186	RBM28	100	85.321	Myotis_lucifugus
ENSPPAG00000041730	RBM28	100	100.000	ENSNGAG00000006480	-	81	100.000	Nannospalax_galili
ENSPPAG00000041730	RBM28	100	92.500	ENSNGAG00000017946	-	100	78.244	Nannospalax_galili
ENSPPAG00000041730	RBM28	100	100.000	ENSNLEG00000012307	RBM28	100	100.000	Nomascus_leucogenys
ENSPPAG00000041730	RBM28	81	87.500	ENSMEUG00000009611	RBM28	91	87.500	Notamacropus_eugenii
ENSPPAG00000041730	RBM28	75	95.000	ENSOPRG00000015140	RBM28	90	76.705	Ochotona_princeps
ENSPPAG00000041730	RBM28	100	79.554	ENSODEG00000003213	-	100	79.030	Octodon_degus
ENSPPAG00000041730	RBM28	76	87.909	ENSODEG00000013217	-	83	87.909	Octodon_degus
ENSPPAG00000041730	RBM28	79	52.954	ENSONIG00000014924	rbm28	71	52.632	Oreochromis_niloticus
ENSPPAG00000041730	RBM28	87	81.463	ENSOANG00000000815	-	95	81.463	Ornithorhynchus_anatinus
ENSPPAG00000041730	RBM28	100	100.000	ENSOCUG00000003009	RBM28	100	82.399	Oryctolagus_cuniculus
ENSPPAG00000041730	RBM28	99	49.248	ENSORLG00000009636	rbm28	69	67.500	Oryzias_latipes
ENSPPAG00000041730	RBM28	77	67.500	ENSORLG00020002123	rbm28	69	67.500	Oryzias_latipes_hni
ENSPPAG00000041730	RBM28	79	72.222	ENSORLG00015015030	rbm28	97	60.784	Oryzias_latipes_hsok
ENSPPAG00000041730	RBM28	77	67.500	ENSOMEG00000007801	rbm28	70	67.500	Oryzias_melastigma
ENSPPAG00000041730	RBM28	100	84.109	ENSOGAG00000006011	RBM28	100	92.500	Otolemur_garnettii
ENSPPAG00000041730	RBM28	100	83.681	ENSOARG00000002547	RBM28	100	83.812	Ovis_aries
ENSPPAG00000041730	RBM28	100	100.000	ENSPPRG00000004420	RBM28	100	100.000	Panthera_pardus
ENSPPAG00000041730	RBM28	100	100.000	ENSPTIG00000008550	RBM28	100	100.000	Panthera_tigris_altaica
ENSPPAG00000041730	RBM28	100	100.000	ENSPTRG00000019659	RBM28	100	100.000	Pan_troglodytes
ENSPPAG00000041730	RBM28	100	97.500	ENSPANG00000022295	RBM28	100	97.500	Papio_anubis
ENSPPAG00000041730	RBM28	99	57.500	ENSPKIG00000023453	rbm28	72	57.500	Paramormyrops_kingsleyae
ENSPPAG00000041730	RBM28	89	53.882	ENSPMGG00000012840	rbm28	100	48.620	Periophthalmus_magnuspinnatus
ENSPPAG00000041730	RBM28	96	100.000	ENSPEMG00000020673	Rbm28	100	77.618	Peromyscus_maniculatus_bairdii
ENSPPAG00000041730	RBM28	58	44.819	ENSPMAG00000002948	-	99	46.011	Petromyzon_marinus
ENSPPAG00000041730	RBM28	100	87.500	ENSPCIG00000012810	RBM28	100	71.521	Phascolarctos_cinereus
ENSPPAG00000041730	RBM28	80	65.000	ENSPFOG00000018209	rbm28	100	48.864	Poecilia_formosa
ENSPPAG00000041730	RBM28	79	65.000	ENSPLAG00000016078	rbm28	96	49.100	Poecilia_latipinna
ENSPPAG00000041730	RBM28	80	65.000	ENSPMEG00000004292	rbm28	100	48.799	Poecilia_mexicana
ENSPPAG00000041730	RBM28	78	65.000	ENSPREG00000014287	rbm28	98	48.062	Poecilia_reticulata
ENSPPAG00000041730	RBM28	100	100.000	ENSPPYG00000017975	RBM28	100	98.686	Pongo_abelii
ENSPPAG00000041730	RBM28	64	97.500	ENSPCAG00000008223	RBM28	83	75.369	Procavia_capensis
ENSPPAG00000041730	RBM28	100	100.000	ENSPCOG00000016797	RBM28	100	100.000	Propithecus_coquereli
ENSPPAG00000041730	RBM28	76	91.628	ENSPVAG00000005443	RBM28	76	91.628	Pteropus_vampyrus
ENSPPAG00000041730	RBM28	100	52.632	ENSPNYG00000014003	rbm28	72	52.632	Pundamilia_nyererei
ENSPPAG00000041730	RBM28	100	97.500	ENSRNOG00000005468	Rbm28	82	97.500	Rattus_norvegicus
ENSPPAG00000041730	RBM28	100	100.000	ENSRBIG00000033990	RBM28	100	100.000	Rhinopithecus_bieti
ENSPPAG00000041730	RBM28	100	100.000	ENSRROG00000040747	RBM28	100	100.000	Rhinopithecus_roxellana
ENSPPAG00000041730	RBM28	82	100.000	ENSSBOG00000012308	RBM28	100	90.814	Saimiri_boliviensis_boliviensis
ENSPPAG00000041730	RBM28	96	67.436	ENSSHAG00000017017	RBM28	99	66.845	Sarcophilus_harrisii
ENSPPAG00000041730	RBM28	81	62.500	ENSSFOG00015001231	rbm28	75	62.500	Scleropages_formosus
ENSPPAG00000041730	RBM28	70	52.620	ENSSMAG00000003885	rbm28	98	50.939	Scophthalmus_maximus
ENSPPAG00000041730	RBM28	77	57.500	ENSSLDG00000020099	rbm28	100	50.826	Seriola_lalandi_dorsalis
ENSPPAG00000041730	RBM28	71	97.500	ENSSARG00000008303	RBM28	81	85.213	Sorex_araneus
ENSPPAG00000041730	RBM28	66	73.529	ENSSPUG00000000838	RBM28	79	73.529	Sphenodon_punctatus
ENSPPAG00000041730	RBM28	70	53.097	ENSSPAG00000023305	rbm28	100	49.248	Stegastes_partitus
ENSPPAG00000041730	RBM28	100	100.000	ENSSSCG00000031847	RBM28	100	84.797	Sus_scrofa
ENSPPAG00000041730	RBM28	99	65.000	ENSTNIG00000017962	rbm28	99	50.839	Tetraodon_nigroviridis
ENSPPAG00000041730	RBM28	86	87.278	ENSTBEG00000012749	RBM28	94	71.588	Tupaia_belangeri
ENSPPAG00000041730	RBM28	100	100.000	ENSTTRG00000013647	RBM28	100	82.068	Tursiops_truncatus
ENSPPAG00000041730	RBM28	100	100.000	ENSUAMG00000006949	RBM28	100	77.415	Ursus_americanus
ENSPPAG00000041730	RBM28	100	84.928	ENSUMAG00000005997	RBM28	100	84.535	Ursus_maritimus
ENSPPAG00000041730	RBM28	94	73.459	ENSVPAG00000008304	RBM28	87	75.934	Vicugna_pacos
ENSPPAG00000041730	RBM28	100	95.000	ENSVVUG00000007270	RBM28	100	84.535	Vulpes_vulpes
ENSPPAG00000041730	RBM28	99	67.500	ENSXETG00000009271	rbm28	99	56.226	Xenopus_tropicalis
ENSPPAG00000041730	RBM28	71	53.531	ENSXCOG00000020357	rbm28	99	51.782	Xiphophorus_couchianus
ENSPPAG00000041730	RBM28	79	67.500	ENSXMAG00000004415	rbm28	82	67.500	Xiphophorus_maculatus