EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPPAG00000041790 (Gene tree)
Gene ID: 100971985
Gene Symbol: SF3A1
Alias: -
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 22200 bases
Position: chr22:29172536-29194735
Accession: 100971985
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000038213	PRP21_like_P	PF12230.8	2.2e-51	1	1
ENSPPAP00000038213	Surp	PF01805.20	9.9e-46	1	2
ENSPPAP00000038213	Surp	PF01805.20	9.9e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000061116	SF3A1-201	2382	XM_003812016	ENSPPAP00000038213	793 (aa)	XP_003812064	A0A2R9CB73

Gene Model

Click here to download ENSPPAG00000041790's gene model file

Pathways

Pathway ID	Pathway Name	Source
pps03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000041790's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000041790	SF3A1	100	98.991	ENSG00000099995	SF3A1	100	98.991	Homo_sapiens
ENSPPAG00000041790	SF3A1	100	82.390	ENSAPOG00000020465	sf3a1	99	84.258	Acanthochromis_polyacanthus
ENSPPAG00000041790	SF3A1	100	97.358	ENSAMEG00000007737	SF3A1	100	97.358	Ailuropoda_melanoleuca
ENSPPAG00000041790	SF3A1	100	83.774	ENSACIG00000020672	sf3a1	98	85.156	Amphilophus_citrinellus
ENSPPAG00000041790	SF3A1	100	82.125	ENSAOCG00000003060	sf3a1	99	84.516	Amphiprion_ocellaris
ENSPPAG00000041790	SF3A1	100	82.250	ENSAPEG00000010735	sf3a1	99	84.645	Amphiprion_percula
ENSPPAG00000041790	SF3A1	97	85.176	ENSATEG00000021201	sf3a1	97	84.367	Anabas_testudineus
ENSPPAG00000041790	SF3A1	95	92.999	ENSAPLG00000009057	SF3A1	99	92.645	Anas_platyrhynchos
ENSPPAG00000041790	SF3A1	100	84.606	ENSACAG00000009415	SF3A1	100	86.207	Anolis_carolinensis
ENSPPAG00000041790	SF3A1	100	98.108	ENSANAG00000032045	SF3A1	100	98.108	Aotus_nancymaae
ENSPPAG00000041790	SF3A1	100	83.627	ENSACLG00000012622	sf3a1	98	85.789	Astatotilapia_calliptera
ENSPPAG00000041790	SF3A1	99	82.554	ENSAMXG00000005382	sf3a1	99	83.548	Astyanax_mexicanus
ENSPPAG00000041790	SF3A1	100	97.856	ENSBTAG00000003390	SF3A1	100	97.856	Bos_taurus
ENSPPAG00000041790	SF3A1	84	43.447	WBGene00004188	prp-21	94	43.682	Caenorhabditis_elegans
ENSPPAG00000041790	SF3A1	100	98.235	ENSCJAG00000010370	SF3A1	100	98.235	Callithrix_jacchus
ENSPPAG00000041790	SF3A1	100	97.604	ENSCAFG00000012559	SF3A1	100	97.604	Canis_familiaris
ENSPPAG00000041790	SF3A1	100	97.604	ENSCAFG00020000838	SF3A1	100	97.604	Canis_lupus_dingo
ENSPPAG00000041790	SF3A1	100	97.730	ENSCHIG00000018642	SF3A1	100	97.730	Capra_hircus
ENSPPAG00000041790	SF3A1	100	97.982	ENSTSYG00000004739	SF3A1	100	97.982	Carlito_syrichta
ENSPPAG00000041790	SF3A1	94	79.973	ENSCAPG00000015414	SF3A1	98	79.973	Cavia_aperea
ENSPPAG00000041790	SF3A1	100	97.604	ENSCPOG00000014589	SF3A1	100	97.604	Cavia_porcellus
ENSPPAG00000041790	SF3A1	100	98.108	ENSCCAG00000032006	SF3A1	100	98.108	Cebus_capucinus
ENSPPAG00000041790	SF3A1	100	98.613	ENSCATG00000029241	SF3A1	100	98.613	Cercocebus_atys
ENSPPAG00000041790	SF3A1	100	97.730	ENSCLAG00000006508	SF3A1	100	97.730	Chinchilla_lanigera
ENSPPAG00000041790	SF3A1	100	98.739	ENSCSAG00000009470	SF3A1	100	98.739	Chlorocebus_sabaeus
ENSPPAG00000041790	SF3A1	61	100.000	ENSCHOG00000005201	SF3A1	69	100.000	Choloepus_hoffmanni
ENSPPAG00000041790	SF3A1	100	89.421	ENSCPBG00000007595	SF3A1	100	90.428	Chrysemys_picta_bellii
ENSPPAG00000041790	SF3A1	94	52.318	ENSCING00000008526	-	97	50.828	Ciona_intestinalis
ENSPPAG00000041790	SF3A1	92	61.600	ENSCSAVG00000005608	-	92	62.712	Ciona_savignyi
ENSPPAG00000041790	SF3A1	100	98.739	ENSCANG00000033564	SF3A1	100	98.739	Colobus_angolensis_palliatus
ENSPPAG00000041790	SF3A1	100	97.226	ENSCGRG00001008933	Sf3a1	100	97.226	Cricetulus_griseus_chok1gshd
ENSPPAG00000041790	SF3A1	100	97.226	ENSCGRG00000006127	Sf3a1	100	97.226	Cricetulus_griseus_crigri
ENSPPAG00000041790	SF3A1	100	80.750	ENSCSEG00000010792	sf3a1	98	82.965	Cynoglossus_semilaevis
ENSPPAG00000041790	SF3A1	100	82.264	ENSCVAG00000004560	sf3a1	98	83.594	Cyprinodon_variegatus
ENSPPAG00000041790	SF3A1	100	80.470	ENSDARG00000041887	sf3a1	97	83.833	Danio_rerio
ENSPPAG00000041790	SF3A1	100	97.736	ENSDNOG00000010629	SF3A1	100	97.736	Dasypus_novemcinctus
ENSPPAG00000041790	SF3A1	100	97.982	ENSDORG00000005613	Sf3a1	100	97.982	Dipodomys_ordii
ENSPPAG00000041790	SF3A1	79	61.654	FBgn0266917	Sf3a1	85	59.279	Drosophila_melanogaster
ENSPPAG00000041790	SF3A1	89	94.444	ENSETEG00000017194	SF3A1	100	94.444	Echinops_telfairi
ENSPPAG00000041790	SF3A1	100	64.235	ENSEBUG00000001285	sf3a1	96	66.914	Eptatretus_burgeri
ENSPPAG00000041790	SF3A1	100	97.982	ENSEASG00005010254	SF3A1	100	97.982	Equus_asinus_asinus
ENSPPAG00000041790	SF3A1	100	97.982	ENSECAG00000023962	SF3A1	100	97.982	Equus_caballus
ENSPPAG00000041790	SF3A1	73	95.082	ENSEEUG00000003159	SF3A1	82	95.082	Erinaceus_europaeus
ENSPPAG00000041790	SF3A1	100	81.454	ENSELUG00000022578	sf3a1	97	82.552	Esox_lucius
ENSPPAG00000041790	SF3A1	100	97.604	ENSFCAG00000011932	SF3A1	100	97.604	Felis_catus
ENSPPAG00000041790	SF3A1	95	92.328	ENSFALG00000006944	SF3A1	100	91.940	Ficedula_albicollis
ENSPPAG00000041790	SF3A1	100	97.856	ENSFDAG00000009560	SF3A1	100	97.856	Fukomys_damarensis
ENSPPAG00000041790	SF3A1	100	83.396	ENSFHEG00000010866	sf3a1	98	84.766	Fundulus_heteroclitus
ENSPPAG00000041790	SF3A1	100	79.548	ENSGMOG00000016024	sf3a1	97	80.026	Gadus_morhua
ENSPPAG00000041790	SF3A1	95	92.857	ENSGALG00000007937	SF3A1	100	91.814	Gallus_gallus
ENSPPAG00000041790	SF3A1	100	82.390	ENSGAFG00000009111	sf3a1	97	84.183	Gambusia_affinis
ENSPPAG00000041790	SF3A1	100	80.673	ENSGACG00000011893	sf3a1	97	83.246	Gasterosteus_aculeatus
ENSPPAG00000041790	SF3A1	96	89.225	ENSGAGG00000000762	SF3A1	99	90.276	Gopherus_agassizii
ENSPPAG00000041790	SF3A1	100	98.991	ENSGGOG00000012631	SF3A1	100	98.991	Gorilla_gorilla
ENSPPAG00000041790	SF3A1	100	83.627	ENSHBUG00000015795	sf3a1	98	85.789	Haplochromis_burtoni
ENSPPAG00000041790	SF3A1	100	97.856	ENSHGLG00000007907	SF3A1	100	97.856	Heterocephalus_glaber_female
ENSPPAG00000041790	SF3A1	100	97.856	ENSHGLG00100013799	SF3A1	100	97.856	Heterocephalus_glaber_male
ENSPPAG00000041790	SF3A1	100	79.497	ENSHCOG00000015423	sf3a1	99	80.645	Hippocampus_comes
ENSPPAG00000041790	SF3A1	96	80.282	ENSIPUG00000002470	sf3a1	98	82.161	Ictalurus_punctatus
ENSPPAG00000041790	SF3A1	100	97.856	ENSSTOG00000013892	SF3A1	100	97.856	Ictidomys_tridecemlineatus
ENSPPAG00000041790	SF3A1	100	97.733	ENSJJAG00000022566	Sf3a1	100	97.733	Jaculus_jaculus
ENSPPAG00000041790	SF3A1	100	82.013	ENSKMAG00000002400	sf3a1	98	83.984	Kryptolebias_marmoratus
ENSPPAG00000041790	SF3A1	100	81.761	ENSLBEG00000022974	sf3a1	99	82.968	Labrus_bergylta
ENSPPAG00000041790	SF3A1	100	83.498	ENSLACG00000003565	SF3A1	97	87.891	Latimeria_chalumnae
ENSPPAG00000041790	SF3A1	100	84.336	ENSLOCG00000008251	sf3a1	97	85.974	Lepisosteus_oculatus
ENSPPAG00000041790	SF3A1	99	61.146	ENSLAFG00000026032	-	97	61.795	Loxodonta_africana
ENSPPAG00000041790	SF3A1	100	97.856	ENSLAFG00000000448	SF3A1	100	97.856	Loxodonta_africana
ENSPPAG00000041790	SF3A1	100	98.613	ENSMFAG00000031979	SF3A1	100	98.613	Macaca_fascicularis
ENSPPAG00000041790	SF3A1	100	98.613	ENSMMUG00000005547	SF3A1	100	98.613	Macaca_mulatta
ENSPPAG00000041790	SF3A1	100	98.487	ENSMNEG00000037229	SF3A1	100	98.487	Macaca_nemestrina
ENSPPAG00000041790	SF3A1	100	98.739	ENSMLEG00000041908	SF3A1	100	98.739	Mandrillus_leucophaeus
ENSPPAG00000041790	SF3A1	97	84.864	ENSMAMG00000006460	sf3a1	97	84.994	Mastacembelus_armatus
ENSPPAG00000041790	SF3A1	100	83.627	ENSMZEG00005009633	sf3a1	98	85.789	Maylandia_zebra
ENSPPAG00000041790	SF3A1	95	92.989	ENSMGAG00000001330	SF3A1	99	92.636	Meleagris_gallopavo
ENSPPAG00000041790	SF3A1	92	93.852	ENSMAUG00000020317	Sf3a1	94	93.852	Mesocricetus_auratus
ENSPPAG00000041790	SF3A1	100	98.108	ENSMICG00000010038	SF3A1	100	98.108	Microcebus_murinus
ENSPPAG00000041790	SF3A1	100	97.352	ENSMOCG00000008438	Sf3a1	100	97.352	Microtus_ochrogaster
ENSPPAG00000041790	SF3A1	100	81.006	ENSMMOG00000015588	sf3a1	98	82.987	Mola_mola
ENSPPAG00000041790	SF3A1	100	96.469	ENSMODG00000009270	SF3A1	100	96.469	Monodelphis_domestica
ENSPPAG00000041790	SF3A1	100	83.753	ENSMALG00000000148	sf3a1	99	85.286	Monopterus_albus
ENSPPAG00000041790	SF3A1	100	97.100	MGP_CAROLIEiJ_G0016029	Sf3a1	100	97.100	Mus_caroli
ENSPPAG00000041790	SF3A1	100	97.100	ENSMUSG00000002129	Sf3a1	100	97.100	Mus_musculus
ENSPPAG00000041790	SF3A1	100	96.847	MGP_PahariEiJ_G0016862	Sf3a1	100	96.847	Mus_pahari
ENSPPAG00000041790	SF3A1	100	97.100	MGP_SPRETEiJ_G0016870	Sf3a1	100	97.100	Mus_spretus
ENSPPAG00000041790	SF3A1	100	97.604	ENSMPUG00000013144	SF3A1	100	97.604	Mustela_putorius_furo
ENSPPAG00000041790	SF3A1	100	97.730	ENSMLUG00000002139	SF3A1	100	97.730	Myotis_lucifugus
ENSPPAG00000041790	SF3A1	100	97.856	ENSNGAG00000016977	Sf3a1	100	97.856	Nannospalax_galili
ENSPPAG00000041790	SF3A1	100	83.879	ENSNBRG00000016642	sf3a1	96	86.430	Neolamprologus_brichardi
ENSPPAG00000041790	SF3A1	100	98.739	ENSNLEG00000003686	SF3A1	100	98.739	Nomascus_leucogenys
ENSPPAG00000041790	SF3A1	96	86.579	ENSMEUG00000008741	SF3A1	100	86.579	Notamacropus_eugenii
ENSPPAG00000041790	SF3A1	100	97.100	ENSOPRG00000016636	SF3A1	100	97.100	Ochotona_princeps
ENSPPAG00000041790	SF3A1	100	97.856	ENSODEG00000002571	SF3A1	100	97.856	Octodon_degus
ENSPPAG00000041790	SF3A1	100	83.396	ENSONIG00000010848	sf3a1	98	85.156	Oreochromis_niloticus
ENSPPAG00000041790	SF3A1	100	97.478	ENSOCUG00000007633	SF3A1	100	97.478	Oryctolagus_cuniculus
ENSPPAG00000041790	SF3A1	96	81.102	ENSORLG00000013050	sf3a1	98	83.288	Oryzias_latipes
ENSPPAG00000041790	SF3A1	96	81.890	ENSORLG00020003236	sf3a1	94	83.423	Oryzias_latipes_hni
ENSPPAG00000041790	SF3A1	100	81.384	ENSORLG00015017411	sf3a1	99	83.355	Oryzias_latipes_hsok
ENSPPAG00000041790	SF3A1	100	81.887	ENSOMEG00000013362	sf3a1	99	83.097	Oryzias_melastigma
ENSPPAG00000041790	SF3A1	100	98.108	ENSOGAG00000012931	SF3A1	100	98.108	Otolemur_garnettii
ENSPPAG00000041790	SF3A1	100	95.965	ENSOARG00000006849	SF3A1	100	95.965	Ovis_aries
ENSPPAG00000041790	SF3A1	100	97.604	ENSPPRG00000004391	SF3A1	100	97.604	Panthera_pardus
ENSPPAG00000041790	SF3A1	97	97.668	ENSPTIG00000000844	SF3A1	100	97.668	Panthera_tigris_altaica
ENSPPAG00000041790	SF3A1	100	98.991	ENSPTRG00000014240	SF3A1	100	98.991	Pan_troglodytes
ENSPPAG00000041790	SF3A1	100	98.739	ENSPANG00000020772	SF3A1	100	98.739	Papio_anubis
ENSPPAG00000041790	SF3A1	83	94.505	ENSPSIG00000012803	SF3A1	96	94.505	Pelodiscus_sinensis
ENSPPAG00000041790	SF3A1	96	82.794	ENSPMGG00000023096	sf3a1	100	82.637	Periophthalmus_magnuspinnatus
ENSPPAG00000041790	SF3A1	100	97.478	ENSPEMG00000009494	Sf3a1	100	97.478	Peromyscus_maniculatus_bairdii
ENSPPAG00000041790	SF3A1	69	78.040	ENSPMAG00000007139	-	90	79.065	Petromyzon_marinus
ENSPPAG00000041790	SF3A1	100	96.217	ENSPCIG00000022692	SF3A1	100	96.217	Phascolarctos_cinereus
ENSPPAG00000041790	SF3A1	100	74.497	ENSPFOG00000016768	sf3a1	93	78.231	Poecilia_formosa
ENSPPAG00000041790	SF3A1	100	82.767	ENSPLAG00000017268	sf3a1	97	84.444	Poecilia_latipinna
ENSPPAG00000041790	SF3A1	84	85.090	ENSPMEG00000019811	sf3a1	98	84.488	Poecilia_mexicana
ENSPPAG00000041790	SF3A1	100	82.893	ENSPREG00000010347	sf3a1	97	84.837	Poecilia_reticulata
ENSPPAG00000041790	SF3A1	100	98.739	ENSPPYG00000011707	SF3A1	100	98.739	Pongo_abelii
ENSPPAG00000041790	SF3A1	57	98.340	ENSPCAG00000003266	SF3A1	57	98.340	Procavia_capensis
ENSPPAG00000041790	SF3A1	100	98.108	ENSPCOG00000026630	SF3A1	100	98.108	Propithecus_coquereli
ENSPPAG00000041790	SF3A1	100	94.199	ENSPVAG00000017719	SF3A1	100	94.199	Pteropus_vampyrus
ENSPPAG00000041790	SF3A1	100	83.627	ENSPNYG00000018706	sf3a1	98	85.789	Pundamilia_nyererei
ENSPPAG00000041790	SF3A1	96	84.109	ENSPNAG00000003721	sf3a1	98	84.525	Pygocentrus_nattereri
ENSPPAG00000041790	SF3A1	100	97.100	ENSRNOG00000005218	Sf3a1	100	97.100	Rattus_norvegicus
ENSPPAG00000041790	SF3A1	100	98.613	ENSRBIG00000032167	SF3A1	100	98.613	Rhinopithecus_bieti
ENSPPAG00000041790	SF3A1	100	98.613	ENSRROG00000044908	SF3A1	100	98.613	Rhinopithecus_roxellana
ENSPPAG00000041790	SF3A1	97	94.057	ENSSBOG00000021960	SF3A1	100	98.080	Saimiri_boliviensis_boliviensis
ENSPPAG00000041790	SF3A1	98	93.214	ENSSHAG00000003666	SF3A1	98	93.920	Sarcophilus_harrisii
ENSPPAG00000041790	SF3A1	100	80.935	ENSSFOG00015004579	sf3a1	99	84.103	Scleropages_formosus
ENSPPAG00000041790	SF3A1	100	80.224	ENSSMAG00000004275	sf3a1	97	82.876	Scophthalmus_maximus
ENSPPAG00000041790	SF3A1	100	82.875	ENSSDUG00000022219	sf3a1	99	84.645	Seriola_dumerili
ENSPPAG00000041790	SF3A1	100	82.875	ENSSLDG00000012642	sf3a1	99	84.645	Seriola_lalandi_dorsalis
ENSPPAG00000041790	SF3A1	97	94.430	ENSSARG00000005960	SF3A1	100	94.430	Sorex_araneus
ENSPPAG00000041790	SF3A1	96	90.039	ENSSPUG00000018863	SF3A1	100	91.045	Sphenodon_punctatus
ENSPPAG00000041790	SF3A1	100	83.648	ENSSPAG00000011856	sf3a1	99	84.645	Stegastes_partitus
ENSPPAG00000041790	SF3A1	100	97.730	ENSSSCG00000010002	SF3A1	100	97.730	Sus_scrofa
ENSPPAG00000041790	SF3A1	95	92.876	ENSTGUG00000010547	SF3A1	99	92.866	Taeniopygia_guttata
ENSPPAG00000041790	SF3A1	100	81.132	ENSTRUG00000006118	sf3a1	97	82.484	Takifugu_rubripes
ENSPPAG00000041790	SF3A1	64	80.297	ENSTNIG00000005713	sf3a1	89	86.607	Tetraodon_nigroviridis
ENSPPAG00000041790	SF3A1	100	90.542	ENSTBEG00000012771	SF3A1	100	90.542	Tupaia_belangeri
ENSPPAG00000041790	SF3A1	100	97.481	ENSTTRG00000001535	SF3A1	100	97.481	Tursiops_truncatus
ENSPPAG00000041790	SF3A1	99	96.823	ENSUAMG00000006750	SF3A1	99	96.823	Ursus_americanus
ENSPPAG00000041790	SF3A1	99	97.066	ENSUMAG00000016665	SF3A1	99	97.066	Ursus_maritimus
ENSPPAG00000041790	SF3A1	100	97.604	ENSVVUG00000003075	SF3A1	100	97.604	Vulpes_vulpes
ENSPPAG00000041790	SF3A1	100	85.194	ENSXETG00000016144	sf3a1	100	85.194	Xenopus_tropicalis
ENSPPAG00000041790	SF3A1	100	82.138	ENSXCOG00000015653	sf3a1	97	83.922	Xiphophorus_couchianus
ENSPPAG00000041790	SF3A1	100	82.264	ENSXMAG00000002753	sf3a1	97	84.052	Xiphophorus_maculatus