EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000041797 (Gene tree)
Gene ID: 100994040
Gene Symbol: PRPF4
Alias: -
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Plus strand
Length: 18271 bases
Position: chr9:112745455-112763725
Accession: 100994040
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000038173	PRP4	PF08799.11	7.2e-14	1	1
ENSPPAP00000038190	PRP4	PF08799.11	7.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000061076	PRPF4-201	3959	XM_003833049	ENSPPAP00000038173	521 (aa)	XP_003833097	A0A2R9CB33
ENSPPAT00000061093	PRPF4-202	1620	-	ENSPPAP00000038190	539 (aa)	-	A0A2R9C8B8

Gene Model

Click here to download ENSPPAG00000041797's gene model file

Pathways

Pathway ID	Pathway Name	Source
pps03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000041797's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000041797	PRPF4	56	31.111	ENSPPAG00000043583	POC1A	81	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000041797	PRPF4	100	100.000	ENSG00000136875	PRPF4	100	100.000	Homo_sapiens
ENSPPAG00000041797	PRPF4	96	76.987	ENSAPOG00000014132	prpf4	98	76.987	Acanthochromis_polyacanthus
ENSPPAG00000041797	PRPF4	100	99.424	ENSAMEG00000013048	PRPF4	100	98.315	Ailuropoda_melanoleuca
ENSPPAG00000041797	PRPF4	96	77.183	ENSACIG00000005579	prpf4	99	77.183	Amphilophus_citrinellus
ENSPPAG00000041797	PRPF4	96	76.832	ENSAOCG00000005457	prpf4	99	76.832	Amphiprion_ocellaris
ENSPPAG00000041797	PRPF4	96	76.634	ENSAPEG00000000776	prpf4	99	76.634	Amphiprion_percula
ENSPPAG00000041797	PRPF4	96	76.587	ENSATEG00000023013	prpf4	99	76.587	Anabas_testudineus
ENSPPAG00000041797	PRPF4	100	89.060	ENSAPLG00000006534	PRPF4	98	88.762	Anas_platyrhynchos
ENSPPAG00000041797	PRPF4	100	90.249	ENSACAG00000015110	PRPF4	100	90.249	Anolis_carolinensis
ENSPPAG00000041797	PRPF4	100	99.616	ENSANAG00000022464	PRPF4	99	97.944	Aotus_nancymaae
ENSPPAG00000041797	PRPF4	96	76.984	ENSACLG00000019031	prpf4	99	76.984	Astatotilapia_calliptera
ENSPPAG00000041797	PRPF4	97	61.228	ENSAMXG00000006756	prpf4	99	73.663	Astyanax_mexicanus
ENSPPAG00000041797	PRPF4	100	98.656	ENSBTAG00000004571	PRPF4	100	98.656	Bos_taurus
ENSPPAG00000041797	PRPF4	87	45.254	WBGene00007972	prp-4	91	45.254	Caenorhabditis_elegans
ENSPPAG00000041797	PRPF4	100	99.425	ENSCJAG00000017856	PRPF4	100	99.425	Callithrix_jacchus
ENSPPAG00000041797	PRPF4	100	99.424	ENSCAFG00000003224	PRPF4	99	98.689	Canis_familiaris
ENSPPAG00000041797	PRPF4	100	99.424	ENSCAFG00020022637	PRPF4	100	99.424	Canis_lupus_dingo
ENSPPAG00000041797	PRPF4	100	98.851	ENSCHIG00000024648	-	100	98.851	Capra_hircus
ENSPPAG00000041797	PRPF4	100	99.232	ENSTSYG00000010366	PRPF4	100	99.232	Carlito_syrichta
ENSPPAG00000041797	PRPF4	88	88.305	ENSCAPG00000008935	PRPF4	97	88.305	Cavia_aperea
ENSPPAG00000041797	PRPF4	100	98.848	ENSCPOG00000010747	-	100	98.848	Cavia_porcellus
ENSPPAG00000041797	PRPF4	100	92.514	ENSCPOG00000014729	-	100	92.514	Cavia_porcellus
ENSPPAG00000041797	PRPF4	100	99.424	ENSCCAG00000028990	PRPF4	100	99.424	Cebus_capucinus
ENSPPAG00000041797	PRPF4	100	99.232	ENSCATG00000021552	PRPF4	100	99.232	Cercocebus_atys
ENSPPAG00000041797	PRPF4	100	99.040	ENSCLAG00000013448	PRPF4	100	99.040	Chinchilla_lanigera
ENSPPAG00000041797	PRPF4	87	95.796	ENSCHOG00000007233	PRPF4	100	95.796	Choloepus_hoffmanni
ENSPPAG00000041797	PRPF4	99	91.262	ENSCPBG00000019136	PRPF4	79	87.273	Chrysemys_picta_bellii
ENSPPAG00000041797	PRPF4	96	59.055	ENSCING00000001299	-	97	58.416	Ciona_intestinalis
ENSPPAG00000041797	PRPF4	96	57.341	ENSCSAVG00000009178	-	99	58.874	Ciona_savignyi
ENSPPAG00000041797	PRPF4	100	99.424	ENSCANG00000003246	PRPF4	100	99.424	Colobus_angolensis_palliatus
ENSPPAG00000041797	PRPF4	100	99.232	ENSCGRG00001016992	Prpf4	100	99.232	Cricetulus_griseus_chok1gshd
ENSPPAG00000041797	PRPF4	100	99.232	ENSCGRG00000017560	Prpf4	100	99.232	Cricetulus_griseus_crigri
ENSPPAG00000041797	PRPF4	97	75.644	ENSCSEG00000020451	prpf4	99	75.644	Cynoglossus_semilaevis
ENSPPAG00000041797	PRPF4	97	80.000	ENSDARG00000067639	prpf4	99	80.000	Danio_rerio
ENSPPAG00000041797	PRPF4	100	98.851	ENSDNOG00000013203	PRPF4	100	98.851	Dasypus_novemcinctus
ENSPPAG00000041797	PRPF4	100	99.232	ENSDORG00000026275	Prpf4	100	99.232	Dipodomys_ordii
ENSPPAG00000041797	PRPF4	87	56.674	FBgn0036733	U4-U6-60K	99	50.547	Drosophila_melanogaster
ENSPPAG00000041797	PRPF4	100	97.132	ENSETEG00000020389	PRPF4	100	97.132	Echinops_telfairi
ENSPPAG00000041797	PRPF4	95	73.272	ENSEBUG00000015229	prpf4	86	73.733	Eptatretus_burgeri
ENSPPAG00000041797	PRPF4	100	99.616	ENSEASG00005022678	PRPF4	100	99.616	Equus_asinus_asinus
ENSPPAG00000041797	PRPF4	100	99.616	ENSECAG00000007072	PRPF4	100	99.616	Equus_caballus
ENSPPAG00000041797	PRPF4	100	78.166	ENSEEUG00000007480	PRPF4	100	78.166	Erinaceus_europaeus
ENSPPAG00000041797	PRPF4	97	80.990	ENSELUG00000007510	prpf4	99	80.990	Esox_lucius
ENSPPAG00000041797	PRPF4	100	99.425	ENSFCAG00000005514	PRPF4	100	99.425	Felis_catus
ENSPPAG00000041797	PRPF4	98	88.117	ENSFALG00000005423	PRPF4	90	85.376	Ficedula_albicollis
ENSPPAG00000041797	PRPF4	100	98.848	ENSFDAG00000005839	PRPF4	100	98.848	Fukomys_damarensis
ENSPPAG00000041797	PRPF4	96	76.190	ENSFHEG00000001300	prpf4	99	76.190	Fundulus_heteroclitus
ENSPPAG00000041797	PRPF4	98	90.020	ENSGALG00000008857	PRPF4	98	88.091	Gallus_gallus
ENSPPAG00000041797	PRPF4	65	71.471	ENSGAFG00000012164	prpf4	70	71.471	Gambusia_affinis
ENSPPAG00000041797	PRPF4	96	70.040	ENSGACG00000015476	prpf4	99	69.246	Gasterosteus_aculeatus
ENSPPAG00000041797	PRPF4	99	91.068	ENSGAGG00000025029	PRPF4	97	89.905	Gopherus_agassizii
ENSPPAG00000041797	PRPF4	100	100.000	ENSGGOG00000006943	PRPF4	100	100.000	Gorilla_gorilla
ENSPPAG00000041797	PRPF4	96	76.786	ENSHBUG00000000562	prpf4	99	76.786	Haplochromis_burtoni
ENSPPAG00000041797	PRPF4	100	98.848	ENSHGLG00000015191	PRPF4	100	98.848	Heterocephalus_glaber_female
ENSPPAG00000041797	PRPF4	100	80.230	ENSHGLG00000003838	-	100	80.230	Heterocephalus_glaber_female
ENSPPAG00000041797	PRPF4	100	81.836	ENSHGLG00000016628	-	100	82.600	Heterocephalus_glaber_female
ENSPPAG00000041797	PRPF4	100	80.230	ENSHGLG00100005571	-	100	80.230	Heterocephalus_glaber_male
ENSPPAG00000041797	PRPF4	97	79.010	ENSIPUG00000017956	PRPF4	99	79.010	Ictalurus_punctatus
ENSPPAG00000041797	PRPF4	100	99.040	ENSSTOG00000027833	PRPF4	100	99.040	Ictidomys_tridecemlineatus
ENSPPAG00000041797	PRPF4	100	99.232	ENSJJAG00000008838	Prpf4	100	99.232	Jaculus_jaculus
ENSPPAG00000041797	PRPF4	96	76.190	ENSKMAG00000013236	prpf4	99	76.190	Kryptolebias_marmoratus
ENSPPAG00000041797	PRPF4	96	75.697	ENSLBEG00000020611	prpf4	99	75.697	Labrus_bergylta
ENSPPAG00000041797	PRPF4	99	80.539	ENSLACG00000016317	PRPF4	99	80.539	Latimeria_chalumnae
ENSPPAG00000041797	PRPF4	97	81.584	ENSLOCG00000000581	prpf4	99	81.584	Lepisosteus_oculatus
ENSPPAG00000041797	PRPF4	100	98.659	ENSLAFG00000018225	PRPF4	100	98.659	Loxodonta_africana
ENSPPAG00000041797	PRPF4	100	99.040	ENSMFAG00000039397	PRPF4	100	99.040	Macaca_fascicularis
ENSPPAG00000041797	PRPF4	100	99.232	ENSMMUG00000005844	PRPF4	100	99.232	Macaca_mulatta
ENSPPAG00000041797	PRPF4	100	88.868	ENSMNEG00000033737	PRPF4	100	88.868	Macaca_nemestrina
ENSPPAG00000041797	PRPF4	100	99.232	ENSMLEG00000040284	PRPF4	100	99.232	Mandrillus_leucophaeus
ENSPPAG00000041797	PRPF4	97	76.134	ENSMAMG00000020141	prpf4	99	76.134	Mastacembelus_armatus
ENSPPAG00000041797	PRPF4	96	76.984	ENSMZEG00005023205	prpf4	99	76.984	Maylandia_zebra
ENSPPAG00000041797	PRPF4	99	88.269	ENSMGAG00000001796	PRPF4	99	87.242	Meleagris_gallopavo
ENSPPAG00000041797	PRPF4	100	98.656	ENSMAUG00000018022	Prpf4	100	98.656	Mesocricetus_auratus
ENSPPAG00000041797	PRPF4	100	98.464	ENSMICG00000015022	PRPF4	100	98.276	Microcebus_murinus
ENSPPAG00000041797	PRPF4	100	98.656	ENSMOCG00000018273	Prpf4	100	98.656	Microtus_ochrogaster
ENSPPAG00000041797	PRPF4	97	74.851	ENSMMOG00000021177	prpf4	99	74.851	Mola_mola
ENSPPAG00000041797	PRPF4	100	95.029	ENSMODG00000025096	-	99	93.296	Monodelphis_domestica
ENSPPAG00000041797	PRPF4	100	94.837	ENSMODG00000004444	-	100	94.837	Monodelphis_domestica
ENSPPAG00000041797	PRPF4	96	76.587	ENSMALG00000013624	prpf4	99	76.587	Monopterus_albus
ENSPPAG00000041797	PRPF4	100	99.040	MGP_CAROLIEiJ_G0026078	Prpf4	100	99.040	Mus_caroli
ENSPPAG00000041797	PRPF4	100	99.040	ENSMUSG00000066148	Prpf4	100	99.040	Mus_musculus
ENSPPAG00000041797	PRPF4	100	98.848	MGP_PahariEiJ_G0028413	Prpf4	100	98.848	Mus_pahari
ENSPPAG00000041797	PRPF4	100	99.040	MGP_SPRETEiJ_G0027042	Prpf4	100	99.040	Mus_spretus
ENSPPAG00000041797	PRPF4	100	99.424	ENSMPUG00000007883	PRPF4	100	99.424	Mustela_putorius_furo
ENSPPAG00000041797	PRPF4	100	99.040	ENSMLUG00000015309	-	99	98.311	Myotis_lucifugus
ENSPPAG00000041797	PRPF4	100	97.121	ENSMLUG00000008626	-	99	96.415	Myotis_lucifugus
ENSPPAG00000041797	PRPF4	100	93.858	ENSNGAG00000000468	Prpf4	100	93.858	Nannospalax_galili
ENSPPAG00000041797	PRPF4	96	77.183	ENSNBRG00000007972	prpf4	99	77.183	Neolamprologus_brichardi
ENSPPAG00000041797	PRPF4	100	99.616	ENSNLEG00000016647	PRPF4	100	99.616	Nomascus_leucogenys
ENSPPAG00000041797	PRPF4	99	94.942	ENSMEUG00000013256	PRPF4	100	94.942	Notamacropus_eugenii
ENSPPAG00000041797	PRPF4	100	98.659	ENSOPRG00000005302	PRPF4	100	98.659	Ochotona_princeps
ENSPPAG00000041797	PRPF4	100	99.232	ENSODEG00000018147	PRPF4	100	99.232	Octodon_degus
ENSPPAG00000041797	PRPF4	99	75.287	ENSONIG00000012671	prpf4	99	76.984	Oreochromis_niloticus
ENSPPAG00000041797	PRPF4	100	99.424	ENSOCUG00000005046	PRPF4	100	99.424	Oryctolagus_cuniculus
ENSPPAG00000041797	PRPF4	96	74.900	ENSORLG00000019641	prpf4	99	74.900	Oryzias_latipes
ENSPPAG00000041797	PRPF4	96	74.900	ENSORLG00020019438	prpf4	99	74.900	Oryzias_latipes_hni
ENSPPAG00000041797	PRPF4	96	74.737	ENSOMEG00000020941	prpf4	99	74.737	Oryzias_melastigma
ENSPPAG00000041797	PRPF4	100	94.434	ENSOGAG00000007802	PRPF4	98	94.434	Otolemur_garnettii
ENSPPAG00000041797	PRPF4	100	99.040	ENSOARG00000006319	PRPF4	99	97.579	Ovis_aries
ENSPPAG00000041797	PRPF4	100	99.616	ENSPPRG00000014360	PRPF4	100	99.616	Panthera_pardus
ENSPPAG00000041797	PRPF4	100	99.616	ENSPTIG00000009574	PRPF4	100	99.616	Panthera_tigris_altaica
ENSPPAG00000041797	PRPF4	100	100.000	ENSPTRG00000021274	PRPF4	100	100.000	Pan_troglodytes
ENSPPAG00000041797	PRPF4	100	99.040	ENSPANG00000025776	PRPF4	98	98.876	Papio_anubis
ENSPPAG00000041797	PRPF4	97	81.386	ENSPKIG00000017259	prpf4	99	81.386	Paramormyrops_kingsleyae
ENSPPAG00000041797	PRPF4	100	89.635	ENSPSIG00000010713	PRPF4	97	86.364	Pelodiscus_sinensis
ENSPPAG00000041797	PRPF4	99	58.608	ENSPMGG00000000997	prpf4	99	58.716	Periophthalmus_magnuspinnatus
ENSPPAG00000041797	PRPF4	100	99.232	ENSPEMG00000024115	Prpf4	100	99.232	Peromyscus_maniculatus_bairdii
ENSPPAG00000041797	PRPF4	99	94.942	ENSPCIG00000003821	PRPF4	99	94.942	Phascolarctos_cinereus
ENSPPAG00000041797	PRPF4	96	70.217	ENSPFOG00000013524	prpf4	98	73.292	Poecilia_formosa
ENSPPAG00000041797	PRPF4	82	69.969	ENSPLAG00000011620	prpf4	96	72.360	Poecilia_latipinna
ENSPPAG00000041797	PRPF4	92	74.398	ENSPMEG00000006813	prpf4	98	74.398	Poecilia_mexicana
ENSPPAG00000041797	PRPF4	98	99.025	ENSPCAG00000002561	PRPF4	99	99.025	Procavia_capensis
ENSPPAG00000041797	PRPF4	100	99.040	ENSPCOG00000011975	PRPF4	100	99.040	Propithecus_coquereli
ENSPPAG00000041797	PRPF4	100	95.402	ENSPVAG00000004708	PRPF4	100	95.402	Pteropus_vampyrus
ENSPPAG00000041797	PRPF4	96	76.984	ENSPNYG00000008013	prpf4	99	76.984	Pundamilia_nyererei
ENSPPAG00000041797	PRPF4	97	80.594	ENSPNAG00000000697	prpf4	99	80.594	Pygocentrus_nattereri
ENSPPAG00000041797	PRPF4	100	98.848	ENSRNOG00000014777	Prpf4	100	98.848	Rattus_norvegicus
ENSPPAG00000041797	PRPF4	100	99.424	ENSRBIG00000040221	PRPF4	100	99.424	Rhinopithecus_bieti
ENSPPAG00000041797	PRPF4	100	99.424	ENSRROG00000040240	PRPF4	100	99.424	Rhinopithecus_roxellana
ENSPPAG00000041797	PRPF4	100	95.411	ENSSHAG00000017658	PRPF4	100	95.411	Sarcophilus_harrisii
ENSPPAG00000041797	PRPF4	97	82.178	ENSSFOG00015008963	prpf4	99	82.178	Scleropages_formosus
ENSPPAG00000041797	PRPF4	96	75.595	ENSSMAG00000008889	prpf4	99	75.595	Scophthalmus_maximus
ENSPPAG00000041797	PRPF4	96	73.506	ENSSDUG00000022083	prpf4	98	73.705	Seriola_dumerili
ENSPPAG00000041797	PRPF4	96	73.705	ENSSLDG00000008115	prpf4	98	73.904	Seriola_lalandi_dorsalis
ENSPPAG00000041797	PRPF4	100	90.787	ENSSPUG00000015582	PRPF4	100	90.787	Sphenodon_punctatus
ENSPPAG00000041797	PRPF4	96	71.203	ENSSPAG00000011286	prpf4	99	71.203	Stegastes_partitus
ENSPPAG00000041797	PRPF4	100	99.616	ENSSSCG00000024648	PRPF4	100	99.616	Sus_scrofa
ENSPPAG00000041797	PRPF4	95	90.264	ENSTGUG00000002623	PRPF4	100	90.593	Taeniopygia_guttata
ENSPPAG00000041797	PRPF4	97	75.494	ENSTRUG00000008853	prpf4	99	75.494	Takifugu_rubripes
ENSPPAG00000041797	PRPF4	97	75.050	ENSTNIG00000013250	prpf4	99	75.050	Tetraodon_nigroviridis
ENSPPAG00000041797	PRPF4	100	90.421	ENSTBEG00000000821	PRPF4	100	90.421	Tupaia_belangeri
ENSPPAG00000041797	PRPF4	82	98.993	ENSTTRG00000003246	PRPF4	85	98.993	Tursiops_truncatus
ENSPPAG00000041797	PRPF4	64	96.707	ENSUAMG00000018288	PRPF4	90	96.707	Ursus_americanus
ENSPPAG00000041797	PRPF4	100	98.656	ENSUMAG00000019375	PRPF4	100	98.656	Ursus_maritimus
ENSPPAG00000041797	PRPF4	100	99.042	ENSVPAG00000005281	PRPF4	100	99.042	Vicugna_pacos
ENSPPAG00000041797	PRPF4	100	98.286	ENSVVUG00000002476	PRPF4	100	98.286	Vulpes_vulpes
ENSPPAG00000041797	PRPF4	69	58.056	ENSXCOG00000006101	prpf4	93	59.653	Xiphophorus_couchianus
ENSPPAG00000041797	PRPF4	88	64.629	ENSXMAG00000002750	prpf4	98	65.606	Xiphophorus_maculatus