EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000042450 (Gene tree)
Gene ID: 100974441
Gene Symbol: POLR1A
Alias: -
Full Name: RNA polymerase I subunit A
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 82892 bases
Position: chr2A:87622466-87705357
Accession: 100974441
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000039610	RNA_pol_Rpb1_5	PF04998.17	2.4e-104	1	1
ENSPPAP00000039616	RNA_pol_Rpb1_5	PF04998.17	2.4e-104	1	1
ENSPPAP00000039610	RNA_pol_Rpb1_4	PF05000.17	1.3e-25	1	1
ENSPPAP00000039616	RNA_pol_Rpb1_4	PF05000.17	8.6e-11	1	1
ENSPPAP00000039610	RNA_pol_Rpb1_2	PF00623.20	7.6e-71	1	1
ENSPPAP00000039616	RNA_pol_Rpb1_2	PF00623.20	7.6e-71	1	1
ENSPPAP00000039616	RNA_pol_Rpb1_3	PF04983.18	6.3e-36	1	1
ENSPPAP00000039610	RNA_pol_Rpb1_3	PF04983.18	6.3e-36	1	1
ENSPPAP00000039616	RNA_pol_Rpb1_1	PF04997.12	1.1e-22	1	1
ENSPPAP00000039610	RNA_pol_Rpb1_1	PF04997.12	1.1e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000062521	POLR1A-201	8508	XM_003816568	ENSPPAP00000039610	1720 (aa)	XP_003816616	A0A2R9CCE6
ENSPPAT00000062527	POLR1A-202	5127	-	ENSPPAP00000039616	1708 (aa)	-	A0A2R9CCF8

Gene Model

Click here to download ENSPPAG00000042450's gene model file

Pathways

Pathway ID	Pathway Name	Source
pps03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000042450's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000042450	POLR1A	88	30.769	ENSPPAG00000043734	-	63	36.517

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000042450	POLR1A	100	99.128	ENSG00000068654	POLR1A	100	99.128	Homo_sapiens
ENSPPAG00000042450	POLR1A	69	67.761	ENSAPOG00000017945	polr1a	99	67.761	Acanthochromis_polyacanthus
ENSPPAG00000042450	POLR1A	100	90.581	ENSAMEG00000005807	POLR1A	100	91.803	Ailuropoda_melanoleuca
ENSPPAG00000042450	POLR1A	100	63.274	ENSACIG00000022147	polr1a	100	63.006	Amphilophus_citrinellus
ENSPPAG00000042450	POLR1A	100	65.480	ENSAOCG00000017336	polr1a	100	67.958	Amphiprion_ocellaris
ENSPPAG00000042450	POLR1A	100	65.422	ENSAPEG00000016105	polr1a	100	65.875	Amphiprion_percula
ENSPPAG00000042450	POLR1A	100	65.858	ENSATEG00000016773	polr1a	100	65.800	Anabas_testudineus
ENSPPAG00000042450	POLR1A	86	72.967	ENSAPLG00000013871	POLR1A	99	72.967	Anas_platyrhynchos
ENSPPAG00000042450	POLR1A	99	70.116	ENSACAG00000012141	POLR1A	99	69.120	Anolis_carolinensis
ENSPPAG00000042450	POLR1A	100	94.419	ENSANAG00000033927	POLR1A	100	94.128	Aotus_nancymaae
ENSPPAG00000042450	POLR1A	100	61.982	ENSACLG00000020541	polr1a	100	61.609	Astatotilapia_calliptera
ENSPPAG00000042450	POLR1A	100	89.948	ENSBTAG00000006481	POLR1A	100	89.948	Bos_taurus
ENSPPAG00000042450	POLR1A	99	38.350	WBGene00012999	rpoa-1	98	38.178	Caenorhabditis_elegans
ENSPPAG00000042450	POLR1A	100	94.244	ENSCJAG00000019547	POLR1A	100	94.244	Callithrix_jacchus
ENSPPAG00000042450	POLR1A	100	90.598	ENSCAFG00000007613	POLR1A	100	90.529	Canis_familiaris
ENSPPAG00000042450	POLR1A	100	90.394	ENSCAFG00020014752	POLR1A	100	90.324	Canis_lupus_dingo
ENSPPAG00000042450	POLR1A	100	88.007	ENSCHIG00000018204	POLR1A	100	87.949	Capra_hircus
ENSPPAG00000042450	POLR1A	100	89.890	ENSTSYG00000002761	POLR1A	100	89.425	Carlito_syrichta
ENSPPAG00000042450	POLR1A	97	83.900	ENSCAPG00000010132	POLR1A	100	83.990	Cavia_aperea
ENSPPAG00000042450	POLR1A	100	88.153	ENSCPOG00000012350	POLR1A	100	88.444	Cavia_porcellus
ENSPPAG00000042450	POLR1A	100	94.826	ENSCCAG00000019839	POLR1A	100	94.826	Cebus_capucinus
ENSPPAG00000042450	POLR1A	100	97.558	ENSCATG00000029786	POLR1A	100	97.558	Cercocebus_atys
ENSPPAG00000042450	POLR1A	100	88.580	ENSCLAG00000005187	POLR1A	100	88.406	Chinchilla_lanigera
ENSPPAG00000042450	POLR1A	100	97.326	ENSCSAG00000016251	POLR1A	100	97.326	Chlorocebus_sabaeus
ENSPPAG00000042450	POLR1A	99	74.493	ENSCPBG00000001115	POLR1A	99	74.768	Chrysemys_picta_bellii
ENSPPAG00000042450	POLR1A	99	47.123	ENSCSAVG00000007184	-	91	54.963	Ciona_savignyi
ENSPPAG00000042450	POLR1A	100	94.189	ENSCANG00000031785	POLR1A	100	94.189	Colobus_angolensis_palliatus
ENSPPAG00000042450	POLR1A	96	89.825	ENSCGRG00001006651	Polr1a	100	89.825	Cricetulus_griseus_chok1gshd
ENSPPAG00000042450	POLR1A	60	85.645	ENSCGRG00000010834	Polr1a	100	86.957	Cricetulus_griseus_crigri
ENSPPAG00000042450	POLR1A	100	61.806	ENSCSEG00000020190	polr1a	100	61.516	Cynoglossus_semilaevis
ENSPPAG00000042450	POLR1A	100	64.265	ENSCVAG00000020941	polr1a	100	64.475	Cyprinodon_variegatus
ENSPPAG00000042450	POLR1A	100	66.860	ENSDARG00000098375	polr1a	100	66.396	Danio_rerio
ENSPPAG00000042450	POLR1A	100	82.783	ENSDNOG00000010829	POLR1A	100	82.841	Dasypus_novemcinctus
ENSPPAG00000042450	POLR1A	100	87.565	ENSDORG00000008298	Polr1a	100	87.970	Dipodomys_ordii
ENSPPAG00000042450	POLR1A	72	100.000	ENSETEG00000000412	-	72	100.000	Echinops_telfairi
ENSPPAG00000042450	POLR1A	88	65.891	ENSEBUG00000005667	-	99	65.891	Eptatretus_burgeri
ENSPPAG00000042450	POLR1A	100	91.860	ENSEASG00005001625	POLR1A	100	91.860	Equus_asinus_asinus
ENSPPAG00000042450	POLR1A	100	91.860	ENSECAG00000030510	-	100	93.243	Equus_caballus
ENSPPAG00000042450	POLR1A	100	91.860	ENSECAG00000036306	-	100	93.243	Equus_caballus
ENSPPAG00000042450	POLR1A	100	91.860	ENSECAG00000010092	POLR1A	100	93.243	Equus_caballus
ENSPPAG00000042450	POLR1A	85	95.745	ENSEEUG00000000676	POLR1A	85	95.556	Erinaceus_europaeus
ENSPPAG00000042450	POLR1A	100	66.802	ENSELUG00000012769	polr1a	99	66.609	Esox_lucius
ENSPPAG00000042450	POLR1A	100	91.802	ENSFCAG00000008966	POLR1A	100	91.453	Felis_catus
ENSPPAG00000042450	POLR1A	99	71.110	ENSFALG00000010082	POLR1A	99	71.119	Ficedula_albicollis
ENSPPAG00000042450	POLR1A	100	88.386	ENSFDAG00000013726	POLR1A	100	87.921	Fukomys_damarensis
ENSPPAG00000042450	POLR1A	100	61.695	ENSFHEG00000005996	polr1a	100	61.641	Fundulus_heteroclitus
ENSPPAG00000042450	POLR1A	100	60.081	ENSGMOG00000002230	polr1a	100	59.814	Gadus_morhua
ENSPPAG00000042450	POLR1A	90	69.635	ENSGALG00000038160	-	99	69.635	Gallus_gallus
ENSPPAG00000042450	POLR1A	100	64.986	ENSGAFG00000015266	polr1a	100	65.046	Gambusia_affinis
ENSPPAG00000042450	POLR1A	100	64.801	ENSGACG00000018791	polr1a	100	64.801	Gasterosteus_aculeatus
ENSPPAG00000042450	POLR1A	89	75.194	ENSGAGG00000004984	-	96	81.416	Gopherus_agassizii
ENSPPAG00000042450	POLR1A	100	99.070	ENSGGOG00000001788	POLR1A	100	99.070	Gorilla_gorilla
ENSPPAG00000042450	POLR1A	90	64.178	ENSHBUG00000020021	polr1a	99	64.377	Haplochromis_burtoni
ENSPPAG00000042450	POLR1A	100	88.269	ENSHGLG00000006334	POLR1A	100	88.560	Heterocephalus_glaber_female
ENSPPAG00000042450	POLR1A	100	88.014	ENSHGLG00100006614	POLR1A	100	88.303	Heterocephalus_glaber_male
ENSPPAG00000042450	POLR1A	100	62.644	ENSHCOG00000003345	polr1a	100	62.601	Hippocampus_comes
ENSPPAG00000042450	POLR1A	100	65.992	ENSIPUG00000013174	polr1a	100	65.207	Ictalurus_punctatus
ENSPPAG00000042450	POLR1A	99	87.260	ENSSTOG00000012580	POLR1A	99	87.435	Ictidomys_tridecemlineatus
ENSPPAG00000042450	POLR1A	100	86.783	ENSJJAG00000013113	Polr1a	100	87.014	Jaculus_jaculus
ENSPPAG00000042450	POLR1A	100	65.621	ENSKMAG00000007399	polr1a	100	65.258	Kryptolebias_marmoratus
ENSPPAG00000042450	POLR1A	95	68.252	ENSLBEG00000015401	polr1a	99	67.989	Labrus_bergylta
ENSPPAG00000042450	POLR1A	53	76.605	ENSLACG00000003218	polr1a	100	76.605	Latimeria_chalumnae
ENSPPAG00000042450	POLR1A	100	70.237	ENSLOCG00000010881	polr1a	100	69.942	Lepisosteus_oculatus
ENSPPAG00000042450	POLR1A	100	89.583	ENSLAFG00000014948	POLR1A	100	89.641	Loxodonta_africana
ENSPPAG00000042450	POLR1A	100	97.500	ENSMFAG00000046097	POLR1A	100	97.500	Macaca_fascicularis
ENSPPAG00000042450	POLR1A	100	97.384	ENSMMUG00000015815	POLR1A	100	97.384	Macaca_mulatta
ENSPPAG00000042450	POLR1A	100	97.442	ENSMNEG00000043313	POLR1A	100	97.442	Macaca_nemestrina
ENSPPAG00000042450	POLR1A	100	96.860	ENSMLEG00000042428	POLR1A	100	96.860	Mandrillus_leucophaeus
ENSPPAG00000042450	POLR1A	100	65.533	ENSMAMG00000016565	polr1a	100	66.164	Mastacembelus_armatus
ENSPPAG00000042450	POLR1A	100	65.701	ENSMZEG00005004915	polr1a	100	65.434	Maylandia_zebra
ENSPPAG00000042450	POLR1A	99	69.333	ENSMGAG00000013111	POLR1A	99	69.333	Meleagris_gallopavo
ENSPPAG00000042450	POLR1A	92	87.176	ENSMAUG00000008497	Polr1a	100	86.987	Mesocricetus_auratus
ENSPPAG00000042450	POLR1A	100	92.214	ENSMICG00000000757	POLR1A	100	91.923	Microcebus_murinus
ENSPPAG00000042450	POLR1A	100	86.740	ENSMOCG00000000122	Polr1a	100	87.261	Microtus_ochrogaster
ENSPPAG00000042450	POLR1A	100	65.116	ENSMMOG00000010216	polr1a	100	65.058	Mola_mola
ENSPPAG00000042450	POLR1A	100	75.245	ENSMODG00000009335	POLR1A	100	74.827	Monodelphis_domestica
ENSPPAG00000042450	POLR1A	100	65.856	ENSMALG00000013363	polr1a	100	65.856	Monopterus_albus
ENSPPAG00000042450	POLR1A	100	85.756	MGP_CAROLIEiJ_G0028494	Polr1a	100	85.350	Mus_caroli
ENSPPAG00000042450	POLR1A	100	86.103	ENSMUSG00000049553	Polr1a	100	85.698	Mus_musculus
ENSPPAG00000042450	POLR1A	100	86.219	MGP_PahariEiJ_G0022230	Polr1a	100	85.871	Mus_pahari
ENSPPAG00000042450	POLR1A	100	84.462	MGP_SPRETEiJ_G0029499	Polr1a	100	84.532	Mus_spretus
ENSPPAG00000042450	POLR1A	100	90.407	ENSMPUG00000009135	POLR1A	100	90.349	Mustela_putorius_furo
ENSPPAG00000042450	POLR1A	100	89.532	ENSMLUG00000015723	POLR1A	100	89.184	Myotis_lucifugus
ENSPPAG00000042450	POLR1A	100	87.731	ENSNGAG00000017907	Polr1a	100	88.021	Nannospalax_galili
ENSPPAG00000042450	POLR1A	100	65.052	ENSNBRG00000000519	polr1a	100	65.549	Neolamprologus_brichardi
ENSPPAG00000042450	POLR1A	100	95.891	ENSNLEG00000002264	POLR1A	100	95.891	Nomascus_leucogenys
ENSPPAG00000042450	POLR1A	75	92.913	ENSMEUG00000011665	-	76	92.913	Notamacropus_eugenii
ENSPPAG00000042450	POLR1A	99	82.363	ENSOPRG00000008269	POLR1A	100	82.305	Ochotona_princeps
ENSPPAG00000042450	POLR1A	100	89.024	ENSODEG00000003542	POLR1A	100	88.850	Octodon_degus
ENSPPAG00000042450	POLR1A	100	65.779	ENSONIG00000015895	polr1a	100	65.895	Oreochromis_niloticus
ENSPPAG00000042450	POLR1A	100	90.587	ENSOCUG00000010138	POLR1A	100	90.587	Oryctolagus_cuniculus
ENSPPAG00000042450	POLR1A	100	64.540	ENSORLG00000008753	polr1a	99	64.931	Oryzias_latipes
ENSPPAG00000042450	POLR1A	100	63.657	ENSORLG00020020726	polr1a	99	63.405	Oryzias_latipes_hni
ENSPPAG00000042450	POLR1A	96	74.468	ENSORLG00015016071	polr1a	99	74.444	Oryzias_latipes_hsok
ENSPPAG00000042450	POLR1A	100	90.988	ENSOGAG00000004031	POLR1A	100	90.988	Otolemur_garnettii
ENSPPAG00000042450	POLR1A	100	89.495	ENSOARG00000020601	POLR1A	100	89.553	Ovis_aries
ENSPPAG00000042450	POLR1A	100	91.802	ENSPPRG00000006702	POLR1A	100	91.453	Panthera_pardus
ENSPPAG00000042450	POLR1A	100	91.251	ENSPTIG00000018783	POLR1A	100	90.904	Panthera_tigris_altaica
ENSPPAG00000042450	POLR1A	100	99.593	ENSPTRG00000012147	POLR1A	100	99.593	Pan_troglodytes
ENSPPAG00000042450	POLR1A	100	97.442	ENSPANG00000025908	POLR1A	100	97.442	Papio_anubis
ENSPPAG00000042450	POLR1A	94	76.389	ENSPKIG00000005468	polr1a	99	76.389	Paramormyrops_kingsleyae
ENSPPAG00000042450	POLR1A	63	70.036	ENSPSIG00000009321	-	99	71.677	Pelodiscus_sinensis
ENSPPAG00000042450	POLR1A	54	68.128	ENSPMGG00000009718	polr1a	95	68.128	Periophthalmus_magnuspinnatus
ENSPPAG00000042450	POLR1A	100	87.724	ENSPEMG00000022224	Polr1a	100	87.956	Peromyscus_maniculatus_bairdii
ENSPPAG00000042450	POLR1A	95	78.736	ENSPCIG00000004222	POLR1A	99	78.116	Phascolarctos_cinereus
ENSPPAG00000042450	POLR1A	100	65.469	ENSPFOG00000005025	polr1a	100	65.411	Poecilia_formosa
ENSPPAG00000042450	POLR1A	100	65.643	ENSPLAG00000021389	polr1a	100	65.585	Poecilia_latipinna
ENSPPAG00000042450	POLR1A	100	63.673	ENSPMEG00000006463	polr1a	100	63.926	Poecilia_mexicana
ENSPPAG00000042450	POLR1A	100	65.469	ENSPREG00000002389	polr1a	100	65.373	Poecilia_reticulata
ENSPPAG00000042450	POLR1A	100	97.326	ENSPPYG00000012217	POLR1A	100	97.326	Pongo_abelii
ENSPPAG00000042450	POLR1A	92	96.000	ENSPCAG00000011582	POLR1A	92	96.000	Procavia_capensis
ENSPPAG00000042450	POLR1A	100	92.156	ENSPCOG00000026987	POLR1A	100	91.923	Propithecus_coquereli
ENSPPAG00000042450	POLR1A	95	91.912	ENSPVAG00000012674	POLR1A	95	91.166	Pteropus_vampyrus
ENSPPAG00000042450	POLR1A	100	65.701	ENSPNYG00000000026	polr1a	100	65.434	Pundamilia_nyererei
ENSPPAG00000042450	POLR1A	100	67.071	ENSPNAG00000019223	polr1a	99	67.483	Pygocentrus_nattereri
ENSPPAG00000042450	POLR1A	100	87.493	ENSRNOG00000009545	Polr1a	100	87.203	Rattus_norvegicus
ENSPPAG00000042450	POLR1A	100	96.744	ENSRBIG00000028335	POLR1A	100	96.744	Rhinopithecus_bieti
ENSPPAG00000042450	POLR1A	100	96.686	ENSRROG00000031473	POLR1A	100	96.686	Rhinopithecus_roxellana
ENSPPAG00000042450	POLR1A	99	36.948	YOR341W	RPA190	99	36.898	Saccharomyces_cerevisiae
ENSPPAG00000042450	POLR1A	100	93.953	ENSSBOG00000030262	POLR1A	100	93.953	Saimiri_boliviensis_boliviensis
ENSPPAG00000042450	POLR1A	100	73.775	ENSSHAG00000014739	POLR1A	100	72.790	Sarcophilus_harrisii
ENSPPAG00000042450	POLR1A	100	67.457	ENSSFOG00015019716	polr1a	100	67.341	Scleropages_formosus
ENSPPAG00000042450	POLR1A	100	66.243	ENSSMAG00000014342	polr1a	100	66.050	Scophthalmus_maximus
ENSPPAG00000042450	POLR1A	100	66.705	ENSSDUG00000014631	polr1a	100	66.705	Seriola_dumerili
ENSPPAG00000042450	POLR1A	100	64.988	ENSSLDG00000024095	polr1a	100	64.986	Seriola_lalandi_dorsalis
ENSPPAG00000042450	POLR1A	75	96.809	ENSSARG00000003136	-	76	96.809	Sorex_araneus
ENSPPAG00000042450	POLR1A	100	71.031	ENSSPUG00000004215	POLR1A	98	78.974	Sphenodon_punctatus
ENSPPAG00000042450	POLR1A	63	71.882	ENSSPAG00000016341	polr1a	94	71.882	Stegastes_partitus
ENSPPAG00000042450	POLR1A	83	90.890	ENSSSCG00000008226	POLR1A	99	90.864	Sus_scrofa
ENSPPAG00000042450	POLR1A	99	70.059	ENSTGUG00000010704	POLR1A	100	70.059	Taeniopygia_guttata
ENSPPAG00000042450	POLR1A	100	63.767	ENSTRUG00000002210	polr1a	99	64.331	Takifugu_rubripes
ENSPPAG00000042450	POLR1A	100	60.552	ENSTNIG00000010116	polr1a	100	60.529	Tetraodon_nigroviridis
ENSPPAG00000042450	POLR1A	74	97.345	ENSTBEG00000008646	POLR1A	74	97.345	Tupaia_belangeri
ENSPPAG00000042450	POLR1A	100	86.578	ENSTTRG00000008597	POLR1A	100	86.345	Tursiops_truncatus
ENSPPAG00000042450	POLR1A	69	91.124	ENSUAMG00000012158	-	94	90.533	Ursus_americanus
ENSPPAG00000042450	POLR1A	100	89.942	ENSUMAG00000006700	POLR1A	100	89.767	Ursus_maritimus
ENSPPAG00000042450	POLR1A	100	90.424	ENSVVUG00000001245	POLR1A	100	90.354	Vulpes_vulpes
ENSPPAG00000042450	POLR1A	100	67.013	ENSXETG00000001952	polr1a	100	69.328	Xenopus_tropicalis
ENSPPAG00000042450	POLR1A	100	65.587	ENSXMAG00000004032	polr1a	100	65.645	Xiphophorus_maculatus