EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000042456 (Gene tree)
Gene ID: 100992010
Gene Symbol: -
Alias: -
Full Name: G-rich RNA sequence binding factor 1
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Plus strand
Length: 19891 bases
Position: chr4:59731442-59751332
Accession: 100992010
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000039530	RRM_1	PF00076.22	1.6e-21	1	2
ENSPPAP00000039530	RRM_1	PF00076.22	1.6e-21	2	2
ENSPPAP00000039529	RRM_1	PF00076.22	1.6e-21	1	2
ENSPPAP00000039529	RRM_1	PF00076.22	1.6e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000062441	-	939	-	ENSPPAP00000039530	312 (aa)	-	A0A2R9CC66
ENSPPAT00000062440	-	2624	XM_008961142	ENSPPAP00000039529	318 (aa)	XP_008959390	A0A2R9CCC7

Gene Model

Click here to download ENSPPAG00000042456's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000042456's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000042456	-	98	62.667	ENSPPAG00000041056	-	66	62.667
ENSPPAG00000042456	-	98	58.621	ENSPPAG00000038325	-	79	48.182
ENSPPAG00000042456	-	52	66.234	ENSPPAG00000033764	HNRNPH3	75	41.221
ENSPPAG00000042456	-	95	56.250	ENSPPAG00000037145	-	52	56.250
ENSPPAG00000042456	-	98	50.877	ENSPPAG00000028452	-	59	50.877

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000042456	-	100	100.000	ENSG00000132463	GRSF1	100	100.000	Homo_sapiens
ENSPPAG00000042456	-	100	96.226	ENSAMEG00000005896	GRSF1	91	96.452	Ailuropoda_melanoleuca
ENSPPAG00000042456	-	99	72.812	ENSACAG00000012921	GRSF1	68	72.812	Anolis_carolinensis
ENSPPAG00000042456	-	100	97.799	ENSANAG00000022114	GRSF1	98	97.742	Aotus_nancymaae
ENSPPAG00000042456	-	100	95.597	ENSBTAG00000008577	GRSF1	91	95.806	Bos_taurus
ENSPPAG00000042456	-	100	97.799	ENSCJAG00000014477	GRSF1	99	98.058	Callithrix_jacchus
ENSPPAG00000042456	-	90	96.085	ENSCAFG00000002922	GRSF1	100	96.085	Canis_familiaris
ENSPPAG00000042456	-	100	95.912	ENSCAFG00020027060	GRSF1	79	96.129	Canis_lupus_dingo
ENSPPAG00000042456	-	100	95.597	ENSCHIG00000021580	GRSF1	69	95.806	Capra_hircus
ENSPPAG00000042456	-	100	96.855	ENSTSYG00000008487	-	100	96.855	Carlito_syrichta
ENSPPAG00000042456	-	100	83.962	ENSTSYG00000028860	-	88	83.962	Carlito_syrichta
ENSPPAG00000042456	-	99	89.286	ENSCAPG00000000156	GRSF1	100	89.286	Cavia_aperea
ENSPPAG00000042456	-	100	89.308	ENSCPOG00000011662	GRSF1	91	89.308	Cavia_porcellus
ENSPPAG00000042456	-	100	96.541	ENSCCAG00000028735	-	69	96.541	Cebus_capucinus
ENSPPAG00000042456	-	83	85.328	ENSCCAG00000024189	-	95	75.161	Cebus_capucinus
ENSPPAG00000042456	-	100	99.057	ENSCATG00000035808	GRSF1	100	98.718	Cercocebus_atys
ENSPPAG00000042456	-	100	89.623	ENSCLAG00000003057	GRSF1	91	89.623	Chinchilla_lanigera
ENSPPAG00000042456	-	100	98.428	ENSCSAG00000004856	GRSF1	69	98.428	Chlorocebus_sabaeus
ENSPPAG00000042456	-	100	73.041	ENSCPBG00000019502	GRSF1	62	73.041	Chrysemys_picta_bellii
ENSPPAG00000042456	-	100	99.057	ENSCANG00000037992	GRSF1	100	99.057	Colobus_angolensis_palliatus
ENSPPAG00000042456	-	100	93.396	ENSCGRG00001019953	Grsf1	91	93.396	Cricetulus_griseus_chok1gshd
ENSPPAG00000042456	-	100	93.396	ENSCGRG00000005357	Grsf1	91	93.396	Cricetulus_griseus_crigri
ENSPPAG00000042456	-	100	94.340	ENSDORG00000015145	Grsf1	100	97.810	Dipodomys_ordii
ENSPPAG00000042456	-	100	94.025	ENSETEG00000013786	GRSF1	99	94.025	Echinops_telfairi
ENSPPAG00000042456	-	100	96.226	ENSEASG00005016685	GRSF1	64	96.226	Equus_asinus_asinus
ENSPPAG00000042456	-	100	95.912	ENSECAG00000024208	GRSF1	65	95.912	Equus_caballus
ENSPPAG00000042456	-	98	46.094	ENSELUG00000011613	-	73	47.170	Esox_lucius
ENSPPAG00000042456	-	100	95.597	ENSFCAG00000007270	GRSF1	69	95.806	Felis_catus
ENSPPAG00000042456	-	99	53.231	ENSFALG00000008394	GRSF1	96	53.231	Ficedula_albicollis
ENSPPAG00000042456	-	66	89.781	ENSFDAG00000008167	-	100	89.781	Fukomys_damarensis
ENSPPAG00000042456	-	99	52.366	ENSGALG00000031160	GRSF1	65	52.681	Gallus_gallus
ENSPPAG00000042456	-	100	74.143	ENSGAGG00000006013	GRSF1	72	74.277	Gopherus_agassizii
ENSPPAG00000042456	-	100	99.686	ENSGGOG00000014852	-	100	99.686	Gorilla_gorilla
ENSPPAG00000042456	-	100	88.994	ENSHGLG00000000661	GRSF1	91	89.286	Heterocephalus_glaber_female
ENSPPAG00000042456	-	100	88.994	ENSHGLG00100005974	GRSF1	100	94.161	Heterocephalus_glaber_male
ENSPPAG00000042456	-	100	95.283	ENSSTOG00000011569	GRSF1	91	95.283	Ictidomys_tridecemlineatus
ENSPPAG00000042456	-	97	90.476	ENSJJAG00000005325	Grsf1	100	94.891	Jaculus_jaculus
ENSPPAG00000042456	-	99	54.114	ENSLACG00000009507	GRSF1	91	54.114	Latimeria_chalumnae
ENSPPAG00000042456	-	98	48.726	ENSLOCG00000011589	GRSF1	72	48.726	Lepisosteus_oculatus
ENSPPAG00000042456	-	100	94.654	ENSLAFG00000017032	-	97	78.979	Loxodonta_africana
ENSPPAG00000042456	-	100	98.742	ENSMFAG00000037346	GRSF1	100	98.397	Macaca_fascicularis
ENSPPAG00000042456	-	100	98.742	ENSMMUG00000000380	GRSF1	100	98.077	Macaca_mulatta
ENSPPAG00000042456	-	100	89.308	ENSMNEG00000023162	GRSF1	99	88.291	Macaca_nemestrina
ENSPPAG00000042456	-	100	99.057	ENSMLEG00000007180	GRSF1	100	98.718	Mandrillus_leucophaeus
ENSPPAG00000042456	-	99	52.997	ENSMGAG00000009940	GRSF1	92	52.997	Meleagris_gallopavo
ENSPPAG00000042456	-	100	94.654	ENSMICG00000005385	GRSF1	90	94.654	Microcebus_murinus
ENSPPAG00000042456	-	66	97.080	ENSMOCG00000012769	-	100	97.080	Microtus_ochrogaster
ENSPPAG00000042456	-	100	84.906	ENSMODG00000019088	GRSF1	62	85.390	Monodelphis_domestica
ENSPPAG00000042456	-	100	93.396	MGP_CAROLIEiJ_G0027377	Grsf1	100	97.080	Mus_caroli
ENSPPAG00000042456	-	100	93.396	ENSMUSG00000044221	Grsf1	100	97.080	Mus_musculus
ENSPPAG00000042456	-	100	90.881	MGP_PahariEiJ_G0017155	Grsf1	100	95.620	Mus_pahari
ENSPPAG00000042456	-	100	93.082	MGP_SPRETEiJ_G0028374	Grsf1	91	93.082	Mus_spretus
ENSPPAG00000042456	-	100	95.912	ENSMPUG00000009499	GRSF1	88	96.129	Mustela_putorius_furo
ENSPPAG00000042456	-	100	93.458	ENSMLUG00000028158	GRSF1	91	93.610	Myotis_lucifugus
ENSPPAG00000042456	-	66	99.259	ENSNGAG00000022132	-	99	99.259	Nannospalax_galili
ENSPPAG00000042456	-	100	98.718	ENSNLEG00000007721	-	100	98.718	Nomascus_leucogenys
ENSPPAG00000042456	-	82	87.891	ENSMEUG00000015942	GRSF1	71	87.891	Notamacropus_eugenii
ENSPPAG00000042456	-	97	92.218	ENSOPRG00000010148	-	70	92.218	Ochotona_princeps
ENSPPAG00000042456	-	100	75.786	ENSODEG00000004897	-	79	86.466	Octodon_degus
ENSPPAG00000042456	-	100	77.987	ENSODEG00000010775	-	96	79.470	Octodon_degus
ENSPPAG00000042456	-	100	88.994	ENSODEG00000001826	-	71	88.994	Octodon_degus
ENSPPAG00000042456	-	79	62.602	ENSOANG00000013696	-	100	62.602	Ornithorhynchus_anatinus
ENSPPAG00000042456	-	100	95.912	ENSOCUG00000010029	GRSF1	70	96.129	Oryctolagus_cuniculus
ENSPPAG00000042456	-	100	81.447	ENSOGAG00000026370	-	73	81.447	Otolemur_garnettii
ENSPPAG00000042456	-	100	90.654	ENSOGAG00000000141	-	88	90.654	Otolemur_garnettii
ENSPPAG00000042456	-	100	94.704	ENSOARG00000011898	GRSF1	91	94.888	Ovis_aries
ENSPPAG00000042456	-	100	95.597	ENSPPRG00000022913	GRSF1	69	95.806	Panthera_pardus
ENSPPAG00000042456	-	100	95.283	ENSPTIG00000008060	GRSF1	91	95.484	Panthera_tigris_altaica
ENSPPAG00000042456	-	100	99.686	ENSPTRG00000016136	GRSF1	100	99.679	Pan_troglodytes
ENSPPAG00000042456	-	100	98.113	ENSPANG00000018597	GRSF1	100	97.756	Papio_anubis
ENSPPAG00000042456	-	97	80.255	ENSPSIG00000014267	-	80	80.952	Pelodiscus_sinensis
ENSPPAG00000042456	-	100	94.340	ENSPEMG00000012814	Grsf1	91	94.340	Peromyscus_maniculatus_bairdii
ENSPPAG00000042456	-	100	87.107	ENSPCIG00000000627	GRSF1	69	87.107	Phascolarctos_cinereus
ENSPPAG00000042456	-	100	74.528	ENSPPYG00000014812	GRSF1	64	75.161	Pongo_abelii
ENSPPAG00000042456	-	100	94.654	ENSPCAG00000013949	GRSF1	75	94.654	Procavia_capensis
ENSPPAG00000042456	-	100	96.226	ENSPVAG00000004338	GRSF1	74	96.452	Pteropus_vampyrus
ENSPPAG00000042456	-	100	91.824	ENSRNOG00000003392	Grsf1	87	91.935	Rattus_norvegicus
ENSPPAG00000042456	-	100	99.057	ENSRBIG00000036494	GRSF1	100	99.038	Rhinopithecus_bieti
ENSPPAG00000042456	-	100	98.742	ENSRROG00000035735	GRSF1	100	98.718	Rhinopithecus_roxellana
ENSPPAG00000042456	-	100	97.403	ENSSBOG00000032141	GRSF1	100	71.473	Saimiri_boliviensis_boliviensis
ENSPPAG00000042456	-	100	88.365	ENSSHAG00000018365	GRSF1	86	88.387	Sarcophilus_harrisii
ENSPPAG00000042456	-	99	95.130	ENSSARG00000011681	GRSF1	100	95.130	Sorex_araneus
ENSPPAG00000042456	-	97	65.147	ENSSPUG00000007576	GRSF1	70	65.798	Sphenodon_punctatus
ENSPPAG00000042456	-	100	94.654	ENSSSCG00000008940	GRSF1	69	94.839	Sus_scrofa
ENSPPAG00000042456	-	99	55.590	ENSTGUG00000001644	GRSF1	96	55.590	Taeniopygia_guttata
ENSPPAG00000042456	-	99	95.779	ENSTBEG00000010173	GRSF1	100	95.779	Tupaia_belangeri
ENSPPAG00000042456	-	100	89.623	ENSTTRG00000008405	GRSF1	84	89.677	Tursiops_truncatus
ENSPPAG00000042456	-	97	97.596	ENSUAMG00000008901	GRSF1	82	97.596	Ursus_americanus
ENSPPAG00000042456	-	100	96.541	ENSUMAG00000003757	GRSF1	79	96.774	Ursus_maritimus
ENSPPAG00000042456	-	100	80.189	ENSVPAG00000011889	GRSF1	91	80.189	Vicugna_pacos
ENSPPAG00000042456	-	100	95.912	ENSVVUG00000004150	GRSF1	96	96.129	Vulpes_vulpes
ENSPPAG00000042456	-	99	52.632	ENSXETG00000013850	grsf1	99	50.592	Xenopus_tropicalis