EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPAG00000042883 (Gene tree)
Gene ID: 100977585
Gene Symbol: RPUSD4
Alias: -
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 9712 bases
Position: chr11:124926910-124936621
Accession: 100977585
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000040460	PseudoU_synth_2	PF00849.22	1.3e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000063376	RPUSD4-201	2600	XM_003819898	ENSPPAP00000040460	405 (aa)	XP_003819946	A0A2R9CET7

Gene Model

Click here to download ENSPPAG00000042883's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000042883's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000042883	RPUSD4	93	99.735	ENSG00000165526	RPUSD4	100	99.735	Homo_sapiens
ENSPPAG00000042883	RPUSD4	83	49.854	ENSAPOG00000011024	rpusd4	81	51.682	Acanthochromis_polyacanthus
ENSPPAG00000042883	RPUSD4	78	74.483	ENSAMEG00000005953	-	100	74.483	Ailuropoda_melanoleuca
ENSPPAG00000042883	RPUSD4	93	82.228	ENSAMEG00000000127	-	100	82.228	Ailuropoda_melanoleuca
ENSPPAG00000042883	RPUSD4	80	50.301	ENSACIG00000003533	rpusd4	94	50.617	Amphilophus_citrinellus
ENSPPAG00000042883	RPUSD4	80	51.662	ENSAOCG00000015409	rpusd4	80	52.147	Amphiprion_ocellaris
ENSPPAG00000042883	RPUSD4	80	51.662	ENSAPEG00000018935	rpusd4	80	52.147	Amphiprion_percula
ENSPPAG00000042883	RPUSD4	81	50.301	ENSATEG00000008059	rpusd4	80	50.765	Anabas_testudineus
ENSPPAG00000042883	RPUSD4	68	61.290	ENSAPLG00000013250	RPUSD4	99	59.727	Anas_platyrhynchos
ENSPPAG00000042883	RPUSD4	81	64.865	ENSACAG00000000189	RPUSD4	89	65.846	Anolis_carolinensis
ENSPPAG00000042883	RPUSD4	92	89.516	ENSANAG00000024050	RPUSD4	100	89.516	Aotus_nancymaae
ENSPPAG00000042883	RPUSD4	82	50.442	ENSACLG00000020996	rpusd4	83	51.534	Astatotilapia_calliptera
ENSPPAG00000042883	RPUSD4	84	48.703	ENSAMXG00000031479	rpusd4	89	51.104	Astyanax_mexicanus
ENSPPAG00000042883	RPUSD4	93	78.307	ENSBTAG00000020900	RPUSD4	100	78.042	Bos_taurus
ENSPPAG00000042883	RPUSD4	91	90.000	ENSCJAG00000042850	RPUSD4	93	90.000	Callithrix_jacchus
ENSPPAG00000042883	RPUSD4	93	80.423	ENSCAFG00000010488	RPUSD4	100	80.423	Canis_familiaris
ENSPPAG00000042883	RPUSD4	93	80.423	ENSCAFG00020010621	RPUSD4	100	80.423	Canis_lupus_dingo
ENSPPAG00000042883	RPUSD4	93	78.100	ENSCHIG00000009975	RPUSD4	100	77.836	Capra_hircus
ENSPPAG00000042883	RPUSD4	93	85.676	ENSTSYG00000008456	RPUSD4	100	85.676	Carlito_syrichta
ENSPPAG00000042883	RPUSD4	64	79.457	ENSCAPG00000006040	RPUSD4	100	79.457	Cavia_aperea
ENSPPAG00000042883	RPUSD4	93	79.576	ENSCPOG00000014971	RPUSD4	100	79.576	Cavia_porcellus
ENSPPAG00000042883	RPUSD4	92	90.054	ENSCCAG00000027838	RPUSD4	100	90.054	Cebus_capucinus
ENSPPAG00000042883	RPUSD4	93	92.573	ENSCATG00000041570	RPUSD4	100	92.573	Cercocebus_atys
ENSPPAG00000042883	RPUSD4	93	84.085	ENSCLAG00000016553	RPUSD4	100	84.085	Chinchilla_lanigera
ENSPPAG00000042883	RPUSD4	93	91.777	ENSCSAG00000002274	RPUSD4	100	91.777	Chlorocebus_sabaeus
ENSPPAG00000042883	RPUSD4	70	82.332	ENSCHOG00000010249	RPUSD4	100	82.332	Choloepus_hoffmanni
ENSPPAG00000042883	RPUSD4	70	68.881	ENSCPBG00000011175	RPUSD4	99	68.881	Chrysemys_picta_bellii
ENSPPAG00000042883	RPUSD4	66	42.806	ENSCSAVG00000000872	-	54	42.806	Ciona_savignyi
ENSPPAG00000042883	RPUSD4	93	90.716	ENSCANG00000039684	RPUSD4	100	90.716	Colobus_angolensis_palliatus
ENSPPAG00000042883	RPUSD4	93	82.759	ENSCGRG00001024141	Rpusd4	100	82.759	Cricetulus_griseus_chok1gshd
ENSPPAG00000042883	RPUSD4	93	82.759	ENSCGRG00000014415	Rpusd4	100	82.759	Cricetulus_griseus_crigri
ENSPPAG00000042883	RPUSD4	81	50.602	ENSCVAG00000008761	rpusd4	83	51.070	Cyprinodon_variegatus
ENSPPAG00000042883	RPUSD4	81	50.904	ENSCVAG00000000392	rpusd4	92	51.376	Cyprinodon_variegatus
ENSPPAG00000042883	RPUSD4	84	47.965	ENSDARG00000012674	rpusd4	90	49.068	Danio_rerio
ENSPPAG00000042883	RPUSD4	93	76.393	ENSDNOG00000020026	RPUSD4	100	76.393	Dasypus_novemcinctus
ENSPPAG00000042883	RPUSD4	93	80.637	ENSDORG00000016717	Rpusd4	100	80.637	Dipodomys_ordii
ENSPPAG00000042883	RPUSD4	91	78.049	ENSETEG00000013953	RPUSD4	98	78.049	Echinops_telfairi
ENSPPAG00000042883	RPUSD4	93	82.493	ENSEASG00005022982	RPUSD4	100	82.493	Equus_asinus_asinus
ENSPPAG00000042883	RPUSD4	93	82.228	ENSECAG00000000557	RPUSD4	100	82.228	Equus_caballus
ENSPPAG00000042883	RPUSD4	75	80.978	ENSEEUG00000014036	RPUSD4	80	80.978	Erinaceus_europaeus
ENSPPAG00000042883	RPUSD4	86	50.820	ENSELUG00000008075	rpusd4	87	53.293	Esox_lucius
ENSPPAG00000042883	RPUSD4	93	81.432	ENSFCAG00000029789	RPUSD4	100	81.432	Felis_catus
ENSPPAG00000042883	RPUSD4	82	57.186	ENSFALG00000005171	RPUSD4	98	57.186	Ficedula_albicollis
ENSPPAG00000042883	RPUSD4	93	82.105	ENSFDAG00000014307	RPUSD4	100	82.105	Fukomys_damarensis
ENSPPAG00000042883	RPUSD4	83	50.882	ENSFHEG00000004329	rpusd4	84	51.682	Fundulus_heteroclitus
ENSPPAG00000042883	RPUSD4	79	50.462	ENSGMOG00000017726	rpusd4	95	50.938	Gadus_morhua
ENSPPAG00000042883	RPUSD4	81	57.313	ENSGALG00000024326	RPUSD4	93	58.133	Gallus_gallus
ENSPPAG00000042883	RPUSD4	84	47.126	ENSGAFG00000021559	rpusd4	84	48.193	Gambusia_affinis
ENSPPAG00000042883	RPUSD4	81	47.904	ENSGACG00000001657	rpusd4	97	49.286	Gasterosteus_aculeatus
ENSPPAG00000042883	RPUSD4	82	64.583	ENSGAGG00000000132	RPUSD4	93	64.583	Gopherus_agassizii
ENSPPAG00000042883	RPUSD4	93	98.674	ENSGGOG00000016494	RPUSD4	100	98.674	Gorilla_gorilla
ENSPPAG00000042883	RPUSD4	82	50.442	ENSHBUG00000022838	rpusd4	83	51.534	Haplochromis_burtoni
ENSPPAG00000042883	RPUSD4	93	83.289	ENSHGLG00000002285	RPUSD4	100	83.289	Heterocephalus_glaber_female
ENSPPAG00000042883	RPUSD4	93	83.289	ENSHGLG00100006385	RPUSD4	100	83.289	Heterocephalus_glaber_male
ENSPPAG00000042883	RPUSD4	80	51.672	ENSHCOG00000006612	rpusd4	82	52.322	Hippocampus_comes
ENSPPAG00000042883	RPUSD4	85	49.435	ENSIPUG00000023879	rusd4	83	52.648	Ictalurus_punctatus
ENSPPAG00000042883	RPUSD4	90	83.791	ENSSTOG00000025280	RPUSD4	100	83.791	Ictidomys_tridecemlineatus
ENSPPAG00000042883	RPUSD4	92	82.527	ENSJJAG00000018673	Rpusd4	100	82.527	Jaculus_jaculus
ENSPPAG00000042883	RPUSD4	82	50.442	ENSKMAG00000021805	rpusd4	84	51.840	Kryptolebias_marmoratus
ENSPPAG00000042883	RPUSD4	77	50.621	ENSLBEG00000020394	rpusd4	90	50.621	Labrus_bergylta
ENSPPAG00000042883	RPUSD4	80	61.963	ENSLACG00000011028	RPUSD4	80	62.617	Latimeria_chalumnae
ENSPPAG00000042883	RPUSD4	80	46.341	ENSLOCG00000003124	rpusd4	85	46.875	Lepisosteus_oculatus
ENSPPAG00000042883	RPUSD4	93	81.746	ENSLAFG00000005211	RPUSD4	100	81.746	Loxodonta_africana
ENSPPAG00000042883	RPUSD4	93	92.838	ENSMFAG00000039513	RPUSD4	100	92.838	Macaca_fascicularis
ENSPPAG00000042883	RPUSD4	93	92.838	ENSMMUG00000007933	RPUSD4	100	92.838	Macaca_mulatta
ENSPPAG00000042883	RPUSD4	93	92.838	ENSMNEG00000027414	RPUSD4	100	92.838	Macaca_nemestrina
ENSPPAG00000042883	RPUSD4	93	92.042	ENSMLEG00000042461	RPUSD4	100	92.042	Mandrillus_leucophaeus
ENSPPAG00000042883	RPUSD4	79	50.769	ENSMAMG00000023839	rpusd4	83	50.769	Mastacembelus_armatus
ENSPPAG00000042883	RPUSD4	82	50.442	ENSMZEG00005011999	rpusd4	83	51.534	Maylandia_zebra
ENSPPAG00000042883	RPUSD4	79	58.125	ENSMGAG00000000840	RPUSD4	99	58.025	Meleagris_gallopavo
ENSPPAG00000042883	RPUSD4	93	80.637	ENSMAUG00000010280	Rpusd4	100	80.637	Mesocricetus_auratus
ENSPPAG00000042883	RPUSD4	93	83.024	ENSMICG00000015979	RPUSD4	100	83.024	Microcebus_murinus
ENSPPAG00000042883	RPUSD4	93	77.984	ENSMOCG00000000661	Rpusd4	100	77.984	Microtus_ochrogaster
ENSPPAG00000042883	RPUSD4	77	51.429	ENSMMOG00000021731	rpusd4	93	51.429	Mola_mola
ENSPPAG00000042883	RPUSD4	81	75.535	ENSMODG00000004521	RPUSD4	84	75.535	Monodelphis_domestica
ENSPPAG00000042883	RPUSD4	74	52.614	ENSMALG00000005839	rpusd4	98	50.926	Monopterus_albus
ENSPPAG00000042883	RPUSD4	93	79.576	MGP_CAROLIEiJ_G0031954	Rpusd4	100	79.576	Mus_caroli
ENSPPAG00000042883	RPUSD4	93	78.780	ENSMUSG00000032044	Rpusd4	100	78.780	Mus_musculus
ENSPPAG00000042883	RPUSD4	93	79.045	MGP_PahariEiJ_G0014819	Rpusd4	100	79.045	Mus_pahari
ENSPPAG00000042883	RPUSD4	88	82.353	MGP_SPRETEiJ_G0033078	Rpusd4	100	79.045	Mus_spretus
ENSPPAG00000042883	RPUSD4	92	79.784	ENSMPUG00000006608	RPUSD4	99	79.784	Mustela_putorius_furo
ENSPPAG00000042883	RPUSD4	92	78.723	ENSMLUG00000017328	-	99	77.867	Myotis_lucifugus
ENSPPAG00000042883	RPUSD4	63	83.465	ENSMLUG00000029348	-	100	83.465	Myotis_lucifugus
ENSPPAG00000042883	RPUSD4	92	78.706	ENSNGAG00000020847	Rpusd4	98	78.706	Nannospalax_galili
ENSPPAG00000042883	RPUSD4	81	51.506	ENSNBRG00000005207	rpusd4	94	51.840	Neolamprologus_brichardi
ENSPPAG00000042883	RPUSD4	93	95.756	ENSNLEG00000007465	RPUSD4	100	95.756	Nomascus_leucogenys
ENSPPAG00000042883	RPUSD4	91	69.459	ENSMEUG00000004370	RPUSD4	98	69.459	Notamacropus_eugenii
ENSPPAG00000042883	RPUSD4	65	62.264	ENSOPRG00000013141	-	100	62.264	Ochotona_princeps
ENSPPAG00000042883	RPUSD4	93	81.167	ENSODEG00000004577	RPUSD4	100	81.167	Octodon_degus
ENSPPAG00000042883	RPUSD4	83	50.872	ENSONIG00000018879	rpusd4	87	52.294	Oreochromis_niloticus
ENSPPAG00000042883	RPUSD4	72	69.492	ENSOANG00000007247	RPUSD4	95	69.360	Ornithorhynchus_anatinus
ENSPPAG00000042883	RPUSD4	93	81.432	ENSOCUG00000017039	RPUSD4	98	82.480	Oryctolagus_cuniculus
ENSPPAG00000042883	RPUSD4	85	48.138	ENSORLG00000002750	rpusd4	91	49.699	Oryzias_latipes
ENSPPAG00000042883	RPUSD4	82	48.817	ENSORLG00020002044	rpusd4	82	49.249	Oryzias_latipes_hni
ENSPPAG00000042883	RPUSD4	82	49.112	ENSORLG00015020034	rpusd4	82	49.550	Oryzias_latipes_hsok
ENSPPAG00000042883	RPUSD4	83	50.292	ENSOMEG00000004861	rpusd4	82	50.742	Oryzias_melastigma
ENSPPAG00000042883	RPUSD4	93	81.481	ENSOGAG00000008922	RPUSD4	100	81.481	Otolemur_garnettii
ENSPPAG00000042883	RPUSD4	91	78.649	ENSOARG00000012238	RPUSD4	99	77.513	Ovis_aries
ENSPPAG00000042883	RPUSD4	93	81.432	ENSPPRG00000003081	RPUSD4	100	81.432	Panthera_pardus
ENSPPAG00000042883	RPUSD4	93	81.432	ENSPTIG00000012059	RPUSD4	100	81.432	Panthera_tigris_altaica
ENSPPAG00000042883	RPUSD4	93	99.735	ENSPTRG00000004454	RPUSD4	100	99.735	Pan_troglodytes
ENSPPAG00000042883	RPUSD4	93	92.573	ENSPANG00000015040	RPUSD4	100	92.573	Papio_anubis
ENSPPAG00000042883	RPUSD4	83	56.213	ENSPKIG00000023986	rpusd4	81	57.862	Paramormyrops_kingsleyae
ENSPPAG00000042883	RPUSD4	73	67.114	ENSPSIG00000014268	RPUSD4	95	67.114	Pelodiscus_sinensis
ENSPPAG00000042883	RPUSD4	80	49.695	ENSPMGG00000002806	rpusd4	89	50.155	Periophthalmus_magnuspinnatus
ENSPPAG00000042883	RPUSD4	93	74.005	ENSPEMG00000000278	Rpusd4	100	74.005	Peromyscus_maniculatus_bairdii
ENSPPAG00000042883	RPUSD4	76	44.543	ENSPMAG00000008183	rpusd4	98	44.543	Petromyzon_marinus
ENSPPAG00000042883	RPUSD4	86	74.499	ENSPCIG00000010212	RPUSD4	100	72.527	Phascolarctos_cinereus
ENSPPAG00000042883	RPUSD4	84	49.575	ENSPFOG00000019030	rpusd4	84	51.376	Poecilia_formosa
ENSPPAG00000042883	RPUSD4	84	50.142	ENSPLAG00000016848	rpusd4	81	52.000	Poecilia_latipinna
ENSPPAG00000042883	RPUSD4	84	49.003	ENSPMEG00000017534	rpusd4	84	50.149	Poecilia_mexicana
ENSPPAG00000042883	RPUSD4	79	50.606	ENSPREG00000005689	rpusd4	80	51.911	Poecilia_reticulata
ENSPPAG00000042883	RPUSD4	93	98.143	ENSPPYG00000004043	RPUSD4	100	98.143	Pongo_abelii
ENSPPAG00000042883	RPUSD4	75	80.978	ENSPCAG00000000753	RPUSD4	81	80.978	Procavia_capensis
ENSPPAG00000042883	RPUSD4	92	76.011	ENSPCOG00000020694	RPUSD4	100	76.011	Propithecus_coquereli
ENSPPAG00000042883	RPUSD4	93	81.698	ENSPVAG00000000988	RPUSD4	100	81.698	Pteropus_vampyrus
ENSPPAG00000042883	RPUSD4	82	50.294	ENSPNYG00000009652	rpusd4	83	51.376	Pundamilia_nyererei
ENSPPAG00000042883	RPUSD4	82	51.045	ENSPNAG00000012264	rpusd4	84	52.174	Pygocentrus_nattereri
ENSPPAG00000042883	RPUSD4	93	79.841	ENSRNOG00000011567	Rpusd4	100	79.841	Rattus_norvegicus
ENSPPAG00000042883	RPUSD4	93	91.777	ENSRBIG00000034842	RPUSD4	100	91.777	Rhinopithecus_bieti
ENSPPAG00000042883	RPUSD4	93	91.777	ENSRROG00000039753	RPUSD4	100	91.777	Rhinopithecus_roxellana
ENSPPAG00000042883	RPUSD4	92	88.710	ENSSBOG00000030413	RPUSD4	100	88.710	Saimiri_boliviensis_boliviensis
ENSPPAG00000042883	RPUSD4	74	76.412	ENSSHAG00000008304	RPUSD4	99	76.412	Sarcophilus_harrisii
ENSPPAG00000042883	RPUSD4	73	60.403	ENSSFOG00015006203	rpusd4	85	58.255	Scleropages_formosus
ENSPPAG00000042883	RPUSD4	83	49.267	ENSSMAG00000020978	rpusd4	85	50.459	Scophthalmus_maximus
ENSPPAG00000042883	RPUSD4	80	50.303	ENSSDUG00000013399	rpusd4	84	50.464	Seriola_dumerili
ENSPPAG00000042883	RPUSD4	80	49.697	ENSSLDG00000023507	rpusd4	84	49.845	Seriola_lalandi_dorsalis
ENSPPAG00000042883	RPUSD4	88	58.172	ENSSPUG00000001401	RPUSD4	90	63.692	Sphenodon_punctatus
ENSPPAG00000042883	RPUSD4	81	51.351	ENSSPAG00000012163	rpusd4	84	51.829	Stegastes_partitus
ENSPPAG00000042883	RPUSD4	93	80.637	ENSSSCG00000015233	RPUSD4	100	80.637	Sus_scrofa
ENSPPAG00000042883	RPUSD4	73	60.269	ENSTGUG00000000773	RPUSD4	99	60.269	Taeniopygia_guttata
ENSPPAG00000042883	RPUSD4	80	49.697	ENSTRUG00000012283	rpusd4	83	50.154	Takifugu_rubripes
ENSPPAG00000042883	RPUSD4	81	49.096	ENSTNIG00000014676	rpusd4	83	49.541	Tetraodon_nigroviridis
ENSPPAG00000042883	RPUSD4	93	80.371	ENSTTRG00000001555	RPUSD4	100	80.371	Tursiops_truncatus
ENSPPAG00000042883	RPUSD4	93	81.963	ENSUMAG00000002219	RPUSD4	100	81.963	Ursus_maritimus
ENSPPAG00000042883	RPUSD4	65	80.755	ENSVPAG00000001066	RPUSD4	100	80.755	Vicugna_pacos
ENSPPAG00000042883	RPUSD4	93	80.423	ENSVVUG00000020101	RPUSD4	100	80.423	Vulpes_vulpes
ENSPPAG00000042883	RPUSD4	81	49.555	ENSXCOG00000004676	rpusd4	86	49.699	Xiphophorus_couchianus
ENSPPAG00000042883	RPUSD4	81	49.555	ENSXMAG00000023351	rpusd4	84	50.000	Xiphophorus_maculatus