EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000043072 (Gene tree)
Gene ID: 100978005
Gene Symbol: DDX39B
Alias: -
Full Name: DExD-box helicase 39B
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 11360 bases
Position: chr6:32081210-32092569
Accession: 100978005
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000040882	ResIII	PF04851.15	1.9e-07	1	1
ENSPPAP00000040887	ResIII	PF04851.15	2.2e-07	1	1
ENSPPAP00000040882	DEAD	PF00270.29	9.9e-39	1	1
ENSPPAP00000040887	DEAD	PF00270.29	2.9e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000063808	DDX39B-202	1245	-	ENSPPAP00000040887	414 (aa)	-	A0A2R9CQC3
ENSPPAT00000063803	DDX39B-201	2058	XM_003831590	ENSPPAP00000040882	428 (aa)	XP_003831638	A0A2R9CQC1

Gene Model

Click here to download ENSPPAG00000043072's gene model file

Pathways

Pathway ID	Pathway Name	Source
pps03013	RNA transport	KEGG
pps03015	mRNA surveillance pathway	KEGG
pps03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000043072's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000043072	DDX39B	86	31.165	ENSPPAG00000027347	-	94	31.165
ENSPPAG00000043072	DDX39B	91	32.832	ENSPPAG00000032747	-	84	32.832
ENSPPAG00000043072	DDX39B	92	36.802	ENSPPAG00000039921	EIF4A1	95	36.802
ENSPPAG00000043072	DDX39B	79	30.435	ENSPPAG00000029499	DDX41	54	30.435
ENSPPAG00000043072	DDX39B	87	31.759	ENSPPAG00000035217	DDX49	71	39.241
ENSPPAG00000043072	DDX39B	87	32.153	ENSPPAG00000035843	DDX27	50	33.151
ENSPPAG00000043072	DDX39B	86	32.153	ENSPPAG00000038939	-	95	30.435
ENSPPAG00000043072	DDX39B	79	30.088	ENSPPAG00000039963	-	70	30.088
ENSPPAG00000043072	DDX39B	77	30.211	ENSPPAG00000042005	DDX5	59	30.029
ENSPPAG00000043072	DDX39B	82	30.663	ENSPPAG00000041809	DDX3X	58	30.052
ENSPPAG00000043072	DDX39B	86	30.319	ENSPPAG00000007496	DDX42	51	30.685
ENSPPAG00000043072	DDX39B	84	30.352	ENSPPAG00000027196	DDX25	80	30.556
ENSPPAG00000043072	DDX39B	86	38.919	ENSPPAG00000014857	EIF4A2	94	36.242
ENSPPAG00000043072	DDX39B	100	89.953	ENSPPAG00000040065	DDX39A	100	89.953
ENSPPAG00000043072	DDX39B	88	31.383	ENSPPAG00000040387	-	80	31.383
ENSPPAG00000043072	DDX39B	81	35.159	ENSPPAG00000039793	DDX47	75	35.159
ENSPPAG00000043072	DDX39B	89	32.520	ENSPPAG00000021017	-	93	32.520
ENSPPAG00000043072	DDX39B	61	34.921	ENSPPAG00000040878	-	88	34.749
ENSPPAG00000043072	DDX39B	99	34.033	ENSPPAG00000034894	DDX6	79	35.659
ENSPPAG00000043072	DDX39B	84	36.389	ENSPPAG00000035131	-	95	36.389
ENSPPAG00000043072	DDX39B	91	32.581	ENSPPAG00000004913	DDX19A	85	32.581

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000043072	DDX39B	100	100.000	ENSG00000198563	DDX39B	100	100.000	Homo_sapiens
ENSPPAG00000043072	DDX39B	100	99.766	ENSAMEG00000009508	DDX39B	99	99.766	Ailuropoda_melanoleuca
ENSPPAG00000043072	DDX39B	99	93.677	ENSACIG00000004534	ddx39b	98	93.677	Amphilophus_citrinellus
ENSPPAG00000043072	DDX39B	100	92.824	ENSATEG00000012366	ddx39b	100	92.824	Anabas_testudineus
ENSPPAG00000043072	DDX39B	100	97.203	ENSACAG00000012240	DDX39B	100	97.203	Anolis_carolinensis
ENSPPAG00000043072	DDX39B	100	100.000	ENSANAG00000030372	DDX39B	100	100.000	Aotus_nancymaae
ENSPPAG00000043072	DDX39B	99	90.783	ENSACLG00000018759	ddx39b	99	90.783	Astatotilapia_calliptera
ENSPPAG00000043072	DDX39B	100	92.431	ENSAMXG00000017837	ddx39b	100	92.431	Astyanax_mexicanus
ENSPPAG00000043072	DDX39B	100	99.766	ENSBTAG00000014490	DDX39B	100	99.766	Bos_taurus
ENSPPAG00000043072	DDX39B	100	100.000	ENSCJAG00000003152	DDX39B	100	100.000	Callithrix_jacchus
ENSPPAG00000043072	DDX39B	100	99.533	ENSCAFG00000000509	DDX39B	100	100.000	Canis_familiaris
ENSPPAG00000043072	DDX39B	100	99.533	ENSCAFG00020020530	DDX39B	100	99.533	Canis_lupus_dingo
ENSPPAG00000043072	DDX39B	100	99.766	ENSCHIG00000004579	DDX39B	100	99.766	Capra_hircus
ENSPPAG00000043072	DDX39B	100	100.000	ENSTSYG00000010226	-	100	100.000	Carlito_syrichta
ENSPPAG00000043072	DDX39B	100	85.280	ENSTSYG00000029741	-	100	82.968	Carlito_syrichta
ENSPPAG00000043072	DDX39B	100	99.766	ENSCAPG00000010066	DDX39B	100	99.766	Cavia_aperea
ENSPPAG00000043072	DDX39B	100	99.766	ENSCPOG00000002335	DDX39B	100	99.766	Cavia_porcellus
ENSPPAG00000043072	DDX39B	100	100.000	ENSCCAG00000027897	DDX39B	100	100.000	Cebus_capucinus
ENSPPAG00000043072	DDX39B	99	90.353	ENSCATG00000043709	DDX39B	99	90.353	Cercocebus_atys
ENSPPAG00000043072	DDX39B	100	99.766	ENSCLAG00000014555	DDX39B	100	99.766	Chinchilla_lanigera
ENSPPAG00000043072	DDX39B	99	99.765	ENSCSAG00000008517	DDX39B	100	99.765	Chlorocebus_sabaeus
ENSPPAG00000043072	DDX39B	66	100.000	ENSCPBG00000014671	-	100	100.000	Chrysemys_picta_bellii
ENSPPAG00000043072	DDX39B	100	100.000	ENSCANG00000041217	DDX39B	100	100.000	Colobus_angolensis_palliatus
ENSPPAG00000043072	DDX39B	57	99.184	ENSCGRG00001017315	-	95	99.029	Cricetulus_griseus_chok1gshd
ENSPPAG00000043072	DDX39B	86	84.314	ENSCGRG00001021916	-	89	84.358	Cricetulus_griseus_chok1gshd
ENSPPAG00000043072	DDX39B	57	99.184	ENSCGRG00000012479	-	76	99.184	Cricetulus_griseus_crigri
ENSPPAG00000043072	DDX39B	100	92.184	ENSDARG00000036069	ddx39b	100	92.414	Danio_rerio
ENSPPAG00000043072	DDX39B	100	100.000	ENSDNOG00000010215	DDX39B	100	100.000	Dasypus_novemcinctus
ENSPPAG00000043072	DDX39B	87	99.733	ENSDORG00000004985	Ddx39b	100	99.733	Dipodomys_ordii
ENSPPAG00000043072	DDX39B	87	86.898	ENSETEG00000009649	DDX39B	87	86.898	Echinops_telfairi
ENSPPAG00000043072	DDX39B	100	100.000	ENSEASG00005017156	DDX39B	100	100.000	Equus_asinus_asinus
ENSPPAG00000043072	DDX39B	100	100.000	ENSECAG00000007750	DDX39B	100	100.000	Equus_caballus
ENSPPAG00000043072	DDX39B	100	92.343	ENSELUG00000017904	ddx39b	100	92.343	Esox_lucius
ENSPPAG00000043072	DDX39B	100	99.766	ENSFCAG00000004497	DDX39B	100	99.766	Felis_catus
ENSPPAG00000043072	DDX39B	100	99.766	ENSFDAG00000011074	DDX39B	100	99.766	Fukomys_damarensis
ENSPPAG00000043072	DDX39B	76	99.684	ENSGAGG00000001300	-	80	99.684	Gopherus_agassizii
ENSPPAG00000043072	DDX39B	100	100.000	ENSGGOG00000005989	DDX39B	100	100.000	Gorilla_gorilla
ENSPPAG00000043072	DDX39B	100	99.299	ENSHGLG00000019248	DDX39B	100	99.299	Heterocephalus_glaber_female
ENSPPAG00000043072	DDX39B	100	99.299	ENSHGLG00100011850	DDX39B	100	99.299	Heterocephalus_glaber_male
ENSPPAG00000043072	DDX39B	100	91.284	ENSIPUG00000015733	DDX39B	94	91.743	Ictalurus_punctatus
ENSPPAG00000043072	DDX39B	100	99.533	ENSSTOG00000012838	DDX39B	100	99.533	Ictidomys_tridecemlineatus
ENSPPAG00000043072	DDX39B	100	99.299	ENSJJAG00000005660	-	100	99.299	Jaculus_jaculus
ENSPPAG00000043072	DDX39B	99	78.251	ENSLBEG00000012254	ddx39b	99	78.220	Labrus_bergylta
ENSPPAG00000043072	DDX39B	66	79.078	ENSLBEG00000017177	-	85	75.102	Labrus_bergylta
ENSPPAG00000043072	DDX39B	100	89.862	ENSLACG00000002110	DDX39B	100	89.862	Latimeria_chalumnae
ENSPPAG00000043072	DDX39B	100	99.766	ENSLAFG00000014202	DDX39B	100	99.766	Loxodonta_africana
ENSPPAG00000043072	DDX39B	100	100.000	ENSMFAG00000034233	DDX39B	100	100.000	Macaca_fascicularis
ENSPPAG00000043072	DDX39B	100	100.000	ENSMMUG00000008839	DDX39B	100	100.000	Macaca_mulatta
ENSPPAG00000043072	DDX39B	100	100.000	ENSMNEG00000041059	DDX39B	100	100.000	Macaca_nemestrina
ENSPPAG00000043072	DDX39B	100	100.000	ENSMLEG00000043791	DDX39B	100	100.000	Mandrillus_leucophaeus
ENSPPAG00000043072	DDX39B	99	90.783	ENSMZEG00005017654	ddx39b	99	90.783	Maylandia_zebra
ENSPPAG00000043072	DDX39B	100	99.299	ENSMAUG00000008059	Ddx39b	100	99.299	Mesocricetus_auratus
ENSPPAG00000043072	DDX39B	100	100.000	ENSMICG00000017349	DDX39B	100	100.000	Microcebus_murinus
ENSPPAG00000043072	DDX39B	100	99.533	ENSMOCG00000011169	Ddx39b	100	99.533	Microtus_ochrogaster
ENSPPAG00000043072	DDX39B	88	99.734	ENSMODG00000015791	DDX39B	88	99.734	Monodelphis_domestica
ENSPPAG00000043072	DDX39B	100	99.533	ENSMUSG00000019432	Ddx39b	100	100.000	Mus_musculus
ENSPPAG00000043072	DDX39B	100	99.533	MGP_PahariEiJ_G0020513	Ddx39b	100	100.000	Mus_pahari
ENSPPAG00000043072	DDX39B	100	99.533	MGP_SPRETEiJ_G0022424	Ddx39b	100	99.533	Mus_spretus
ENSPPAG00000043072	DDX39B	100	99.766	ENSMPUG00000011407	DDX39B	100	99.766	Mustela_putorius_furo
ENSPPAG00000043072	DDX39B	75	100.000	ENSMLUG00000001681	DDX39B	100	100.000	Myotis_lucifugus
ENSPPAG00000043072	DDX39B	100	100.000	ENSNGAG00000022948	Ddx39b	100	100.000	Nannospalax_galili
ENSPPAG00000043072	DDX39B	100	75.467	ENSNLEG00000006094	DDX39B	81	99.649	Nomascus_leucogenys
ENSPPAG00000043072	DDX39B	86	100.000	ENSMEUG00000008264	DDX39B	86	100.000	Notamacropus_eugenii
ENSPPAG00000043072	DDX39B	100	99.766	ENSOPRG00000011923	DDX39B	100	99.766	Ochotona_princeps
ENSPPAG00000043072	DDX39B	100	99.533	ENSODEG00000018083	DDX39B	100	99.533	Octodon_degus
ENSPPAG00000043072	DDX39B	100	91.898	ENSONIG00000004740	ddx39b	100	91.898	Oreochromis_niloticus
ENSPPAG00000043072	DDX39B	55	99.156	ENSOANG00000008361	DDX39B	95	99.156	Ornithorhynchus_anatinus
ENSPPAG00000043072	DDX39B	100	96.163	ENSOCUG00000024126	DDX39B	100	96.163	Oryctolagus_cuniculus
ENSPPAG00000043072	DDX39B	100	98.601	ENSOGAG00000028850	-	100	98.601	Otolemur_garnettii
ENSPPAG00000043072	DDX39B	86	91.421	ENSOGAG00000009067	-	100	98.457	Otolemur_garnettii
ENSPPAG00000043072	DDX39B	100	99.766	ENSOARG00000008787	DDX39B	98	99.766	Ovis_aries
ENSPPAG00000043072	DDX39B	100	99.766	ENSPPRG00000001913	DDX39B	100	99.766	Panthera_pardus
ENSPPAG00000043072	DDX39B	100	98.832	ENSPTIG00000017669	DDX39B	100	98.832	Panthera_tigris_altaica
ENSPPAG00000043072	DDX39B	100	100.000	ENSPTRG00000032509	DDX39B	100	100.000	Pan_troglodytes
ENSPPAG00000043072	DDX39B	100	100.000	ENSPANG00000018609	DDX39B	100	100.000	Papio_anubis
ENSPPAG00000043072	DDX39B	100	90.847	ENSPKIG00000011324	ddx39b	100	91.304	Paramormyrops_kingsleyae
ENSPPAG00000043072	DDX39B	100	99.299	ENSPEMG00000016905	Ddx39b	100	99.299	Peromyscus_maniculatus_bairdii
ENSPPAG00000043072	DDX39B	100	100.000	ENSPCIG00000017572	DDX39B	100	100.000	Phascolarctos_cinereus
ENSPPAG00000043072	DDX39B	100	100.000	ENSPPYG00000016433	DDX39B	100	100.000	Pongo_abelii
ENSPPAG00000043072	DDX39B	69	99.648	ENSPCAG00000003484	DDX39B	100	99.648	Procavia_capensis
ENSPPAG00000043072	DDX39B	100	100.000	ENSPCOG00000018656	DDX39B	100	100.000	Propithecus_coquereli
ENSPPAG00000043072	DDX39B	100	99.533	ENSPVAG00000004653	DDX39B	100	99.533	Pteropus_vampyrus
ENSPPAG00000043072	DDX39B	99	82.904	ENSPNYG00000010382	ddx39b	98	82.904	Pundamilia_nyererei
ENSPPAG00000043072	DDX39B	100	92.202	ENSPNAG00000026926	ddx39b	100	92.202	Pygocentrus_nattereri
ENSPPAG00000043072	DDX39B	100	99.533	ENSRNOG00000000841	Ddx39b	100	99.533	Rattus_norvegicus
ENSPPAG00000043072	DDX39B	100	89.720	ENSRBIG00000031309	DDX39B	100	89.720	Rhinopithecus_bieti
ENSPPAG00000043072	DDX39B	100	100.000	ENSRROG00000039517	DDX39B	100	100.000	Rhinopithecus_roxellana
ENSPPAG00000043072	DDX39B	100	89.720	ENSSBOG00000035513	-	100	89.720	Saimiri_boliviensis_boliviensis
ENSPPAG00000043072	DDX39B	100	100.000	ENSSHAG00000003209	DDX39B	100	100.000	Sarcophilus_harrisii
ENSPPAG00000043072	DDX39B	100	91.076	ENSSFOG00015016107	ddx39b	100	91.762	Scleropages_formosus
ENSPPAG00000043072	DDX39B	100	93.287	ENSSDUG00000011557	ddx39b	100	93.519	Seriola_dumerili
ENSPPAG00000043072	DDX39B	100	93.056	ENSSLDG00000015763	ddx39b	100	93.287	Seriola_lalandi_dorsalis
ENSPPAG00000043072	DDX39B	87	87.701	ENSSARG00000005245	DDX39B	100	87.701	Sorex_araneus
ENSPPAG00000043072	DDX39B	100	97.897	ENSSPUG00000012805	DDX39B	100	97.897	Sphenodon_punctatus
ENSPPAG00000043072	DDX39B	100	100.000	ENSSSCG00000001400	DDX39B	100	100.000	Sus_scrofa
ENSPPAG00000043072	DDX39B	100	76.869	ENSTBEG00000003721	DDX39B	100	76.869	Tupaia_belangeri
ENSPPAG00000043072	DDX39B	100	91.455	ENSTTRG00000014074	DDX39B	100	91.455	Tursiops_truncatus
ENSPPAG00000043072	DDX39B	100	86.977	ENSUAMG00000027335	DDX39B	100	86.977	Ursus_americanus
ENSPPAG00000043072	DDX39B	100	90.888	ENSUMAG00000015124	DDX39B	100	90.888	Ursus_maritimus
ENSPPAG00000043072	DDX39B	61	100.000	ENSVPAG00000009167	-	74	100.000	Vicugna_pacos
ENSPPAG00000043072	DDX39B	100	99.533	ENSVVUG00000019518	DDX39B	99	99.533	Vulpes_vulpes
ENSPPAG00000043072	DDX39B	100	83.953	ENSXETG00000002498	ddx39b	99	83.953	Xenopus_tropicalis