EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPPAG00000043308 (Gene tree)
Gene ID: 100985657
Gene Symbol: SETD1B
Alias: -
Full Name: SET domain containing 1B
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Plus strand
Length: 26186 bases
Position: chr12:122777996-122804181
Accession: 100985657
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000041416	RRM_1	PF00076.22	3.1e-10	1	1
ENSPPAP00000041411	RRM_1	PF00076.22	3.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000064337	SETD1B-201	5781	XM_014347276	ENSPPAP00000041411	1926 (aa)	XP_014202762	A0A2R9CHH3
ENSPPAT00000064342	SETD1B-202	5655	-	ENSPPAP00000041416	1884 (aa)	-	A0A2R9CHH8

Gene Model

Click here to download ENSPPAG00000043308's gene model file

Pathways

Pathway ID	Pathway Name	Source
pps00310	Lysine degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000043308's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000043308	SETD1B	100	96.748	ENSG00000139718	SETD1B	100	96.748	Homo_sapiens
ENSPPAG00000043308	SETD1B	65	79.176	ENSAMEG00000014455	SETD1B	61	84.383	Ailuropoda_melanoleuca
ENSPPAG00000043308	SETD1B	70	61.300	ENSACIG00000016453	setd1ba	54	48.338	Amphilophus_citrinellus
ENSPPAG00000043308	SETD1B	70	81.115	ENSATEG00000021563	setd1ba	55	80.368	Anabas_testudineus
ENSPPAG00000043308	SETD1B	87	64.158	ENSAPLG00000005217	SETD1B	69	75.269	Anas_platyrhynchos
ENSPPAG00000043308	SETD1B	78	96.716	ENSANAG00000027480	SETD1B	61	94.012	Aotus_nancymaae
ENSPPAG00000043308	SETD1B	60	87.231	ENSCAFG00020016619	SETD1B	57	96.774	Canis_lupus_dingo
ENSPPAG00000043308	SETD1B	74	94.629	ENSCHIG00000013406	SETD1B	74	94.629	Capra_hircus
ENSPPAG00000043308	SETD1B	100	95.987	ENSCATG00000035803	SETD1B	100	95.987	Cercocebus_atys
ENSPPAG00000043308	SETD1B	51	94.679	ENSCSAG00000002187	SETD1B	57	94.679	Chlorocebus_sabaeus
ENSPPAG00000043308	SETD1B	90	91.429	ENSCANG00000023445	SETD1B	59	92.578	Colobus_angolensis_palliatus
ENSPPAG00000043308	SETD1B	97	94.486	ENSECAG00000006549	SETD1B	62	87.428	Equus_caballus
ENSPPAG00000043308	SETD1B	54	90.537	ENSFDAG00000015120	SETD1B	62	92.222	Fukomys_damarensis
ENSPPAG00000043308	SETD1B	86	56.630	ENSGAFG00000008712	setd1ba	51	81.988	Gambusia_affinis
ENSPPAG00000043308	SETD1B	63	55.122	ENSGAGG00000025013	SETD1B	54	72.979	Gopherus_agassizii
ENSPPAG00000043308	SETD1B	64	93.069	ENSHGLG00000012063	SETD1B	64	78.643	Heterocephalus_glaber_female
ENSPPAG00000043308	SETD1B	85	56.984	ENSKMAG00000007804	setd1ba	69	63.158	Kryptolebias_marmoratus
ENSPPAG00000043308	SETD1B	77	56.725	ENSLACG00000018379	SETD1B	53	69.892	Latimeria_chalumnae
ENSPPAG00000043308	SETD1B	91	94.044	ENSLAFG00000026518	SETD1B	97	94.044	Loxodonta_africana
ENSPPAG00000043308	SETD1B	100	95.228	ENSMFAG00000030930	SETD1B	100	95.228	Macaca_fascicularis
ENSPPAG00000043308	SETD1B	100	94.699	ENSMMUG00000012842	SETD1B	100	94.699	Macaca_mulatta
ENSPPAG00000043308	SETD1B	100	94.778	ENSMNEG00000014228	SETD1B	100	94.778	Macaca_nemestrina
ENSPPAG00000043308	SETD1B	66	62.063	ENSMGAG00000004421	SETD1B	53	71.949	Meleagris_gallopavo
ENSPPAG00000043308	SETD1B	90	51.837	ENSMMOG00000008190	setd1ba	50	82.132	Mola_mola
ENSPPAG00000043308	SETD1B	77	92.825	ENSODEG00000010155	SETD1B	81	93.722	Octodon_degus
ENSPPAG00000043308	SETD1B	95	83.025	ENSOCUG00000017708	SETD1B	100	81.655	Oryctolagus_cuniculus
ENSPPAG00000043308	SETD1B	69	79.755	ENSORLG00000008435	setd1ba	70	81.191	Oryzias_latipes
ENSPPAG00000043308	SETD1B	84	55.251	ENSORLG00020017079	setd1ba	69	81.191	Oryzias_latipes_hni
ENSPPAG00000043308	SETD1B	53	49.905	ENSORLG00015004156	setd1ba	76	50.298	Oryzias_latipes_hsok
ENSPPAG00000043308	SETD1B	100	97.402	ENSPTRG00000005567	SETD1B	100	97.402	Pan_troglodytes
ENSPPAG00000043308	SETD1B	100	95.685	ENSPANG00000014784	SETD1B	100	95.685	Papio_anubis
ENSPPAG00000043308	SETD1B	87	52.828	ENSPFOG00000019768	setd1ba	50	81.388	Poecilia_formosa
ENSPPAG00000043308	SETD1B	91	52.690	ENSPLAG00000023459	setd1ba	50	82.595	Poecilia_latipinna
ENSPPAG00000043308	SETD1B	90	52.552	ENSPREG00000011589	setd1ba	50	82.595	Poecilia_reticulata
ENSPPAG00000043308	SETD1B	62	87.201	ENSPCOG00000003246	SETD1B	61	88.540	Propithecus_coquereli
ENSPPAG00000043308	SETD1B	100	95.260	ENSRBIG00000034516	SETD1B	100	95.260	Rhinopithecus_bieti
ENSPPAG00000043308	SETD1B	100	93.885	ENSRROG00000011844	SETD1B	100	93.885	Rhinopithecus_roxellana
ENSPPAG00000043308	SETD1B	73	96.277	ENSSBOG00000033322	SETD1B	100	96.277	Saimiri_boliviensis_boliviensis
ENSPPAG00000043308	SETD1B	55	86.711	ENSSFOG00015004814	SETD1B	62	82.371	Scleropages_formosus
ENSPPAG00000043308	SETD1B	71	60.741	ENSSPUG00000011847	SETD1B	53	67.304	Sphenodon_punctatus
ENSPPAG00000043308	SETD1B	75	90.169	ENSSSCG00000009806	SETD1B	79	96.100	Sus_scrofa
ENSPPAG00000043308	SETD1B	86	57.385	ENSTRUG00000009533	setd1ba	55	84.590	Takifugu_rubripes
ENSPPAG00000043308	SETD1B	61	80.853	ENSUAMG00000008729	SETD1B	52	91.260	Ursus_americanus