EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000043392 (Gene tree)
Gene ID: 100977253
Gene Symbol: SAFB2
Alias: -
Full Name: scaffold attachment factor B2
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 35882 bases
Position: chr19:5539679-5575560
Accession: 100977253
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000041549	RRM_5	PF13893.6	4.3e-06	1	1
ENSPPAP00000041547	RRM_5	PF13893.6	4.3e-06	1	1
ENSPPAP00000041547	RRM_1	PF00076.22	6.7e-14	1	1
ENSPPAP00000041549	RRM_1	PF00076.22	6.8e-14	1	1
ENSPPAP00000041549	SAP	PF02037.27	2.5e-10	1	1
ENSPPAP00000041547	SAP	PF02037.27	2.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000064473	SAFB2-201	3388	XM_003819300	ENSPPAP00000041547	953 (aa)	XP_003819348	A0A2R9CRF1
ENSPPAT00000064475	SAFB2-202	2859	-	ENSPPAP00000041549	952 (aa)	-	A0A2R9CHZ3

Gene Model

Click here to download ENSPPAG00000043392's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000043392's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000043392	SAFB2	98	69.313	ENSPPAG00000035129	SAFB	100	69.561

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000043392	SAFB2	100	99.790	ENSG00000130254	SAFB2	100	99.790	Homo_sapiens
ENSPPAG00000043392	SAFB2	100	86.779	ENSAMEG00000012146	SAFB2	100	86.674	Ailuropoda_melanoleuca
ENSPPAG00000043392	SAFB2	100	96.642	ENSANAG00000031936	SAFB2	100	96.642	Aotus_nancymaae
ENSPPAG00000043392	SAFB2	100	84.277	ENSBTAG00000001790	SAFB2	99	84.722	Bos_taurus
ENSPPAG00000043392	SAFB2	100	88.901	ENSCAFG00000018814	SAFB2	100	88.901	Canis_familiaris
ENSPPAG00000043392	SAFB2	100	88.901	ENSCAFG00020018939	SAFB2	100	88.901	Canis_lupus_dingo
ENSPPAG00000043392	SAFB2	100	83.857	ENSCHIG00000024547	SAFB2	100	83.857	Capra_hircus
ENSPPAG00000043392	SAFB2	93	67.354	ENSCAPG00000011771	SAFB2	100	67.904	Cavia_aperea
ENSPPAG00000043392	SAFB2	100	79.613	ENSCPOG00000011394	SAFB2	100	79.715	Cavia_porcellus
ENSPPAG00000043392	SAFB2	100	96.747	ENSCCAG00000017348	SAFB2	100	96.747	Cebus_capucinus
ENSPPAG00000043392	SAFB2	100	97.272	ENSCATG00000039497	SAFB2	100	97.272	Cercocebus_atys
ENSPPAG00000043392	SAFB2	100	98.321	ENSCSAG00000009959	SAFB2	100	98.321	Chlorocebus_sabaeus
ENSPPAG00000043392	SAFB2	74	76.271	ENSCHOG00000010684	SAFB2	99	76.412	Choloepus_hoffmanni
ENSPPAG00000043392	SAFB2	100	96.113	ENSCANG00000024675	SAFB2	100	96.113	Colobus_angolensis_palliatus
ENSPPAG00000043392	SAFB2	100	70.181	ENSCGRG00001015833	Safb2	100	69.880	Cricetulus_griseus_chok1gshd
ENSPPAG00000043392	SAFB2	100	70.181	ENSCGRG00000011131	Safb2	100	69.880	Cricetulus_griseus_crigri
ENSPPAG00000043392	SAFB2	95	76.056	ENSDORG00000016199	Safb2	100	76.273	Dipodomys_ordii
ENSPPAG00000043392	SAFB2	86	83.758	ENSEASG00005022952	SAFB2	91	83.254	Equus_asinus_asinus
ENSPPAG00000043392	SAFB2	98	83.671	ENSECAG00000018978	SAFB2	100	83.832	Equus_caballus
ENSPPAG00000043392	SAFB2	100	87.841	ENSFCAG00000011834	SAFB2	100	87.841	Felis_catus
ENSPPAG00000043392	SAFB2	93	83.544	ENSFDAG00000020009	SAFB2	93	83.845	Fukomys_damarensis
ENSPPAG00000043392	SAFB2	100	96.663	ENSGGOG00000015093	SAFB2	100	96.663	Gorilla_gorilla
ENSPPAG00000043392	SAFB2	100	85.905	ENSHGLG00000017442	SAFB2	100	86.550	Heterocephalus_glaber_female
ENSPPAG00000043392	SAFB2	98	82.842	ENSLAFG00000003836	SAFB2	99	81.981	Loxodonta_africana
ENSPPAG00000043392	SAFB2	100	98.531	ENSMFAG00000039706	SAFB2	100	98.531	Macaca_fascicularis
ENSPPAG00000043392	SAFB2	100	98.636	ENSMMUG00000017968	SAFB2	100	98.636	Macaca_mulatta
ENSPPAG00000043392	SAFB2	100	92.476	ENSMNEG00000032042	SAFB2	100	92.092	Macaca_nemestrina
ENSPPAG00000043392	SAFB2	100	98.741	ENSMLEG00000034562	SAFB2	100	98.741	Mandrillus_leucophaeus
ENSPPAG00000043392	SAFB2	82	75.610	ENSMAUG00000011573	Safb2	92	76.122	Mesocricetus_auratus
ENSPPAG00000043392	SAFB2	100	91.109	ENSMICG00000008711	SAFB2	100	91.109	Microcebus_murinus
ENSPPAG00000043392	SAFB2	100	69.394	ENSMOCG00000006827	Safb2	100	68.952	Microtus_ochrogaster
ENSPPAG00000043392	SAFB2	98	72.439	ENSMODG00000001178	SAFB2	100	71.917	Monodelphis_domestica
ENSPPAG00000043392	SAFB2	100	69.483	MGP_CAROLIEiJ_G0021779	Safb2	100	69.185	Mus_caroli
ENSPPAG00000043392	SAFB2	100	69.652	ENSMUSG00000042625	Safb2	100	69.453	Mus_musculus
ENSPPAG00000043392	SAFB2	100	69.100	MGP_PahariEiJ_G0020768	Safb2	100	68.800	Mus_pahari
ENSPPAG00000043392	SAFB2	100	64.226	MGP_SPRETEiJ_G0022690	Safb2	100	62.258	Mus_spretus
ENSPPAG00000043392	SAFB2	100	87.330	ENSMPUG00000006106	SAFB2	93	87.225	Mustela_putorius_furo
ENSPPAG00000043392	SAFB2	100	83.091	ENSMLUG00000001050	SAFB2	100	81.432	Myotis_lucifugus
ENSPPAG00000043392	SAFB2	100	98.634	ENSNLEG00000013514	SAFB2	100	98.634	Nomascus_leucogenys
ENSPPAG00000043392	SAFB2	93	68.680	ENSMEUG00000002456	SAFB2	100	68.345	Notamacropus_eugenii
ENSPPAG00000043392	SAFB2	100	75.495	ENSOPRG00000011523	-	100	75.600	Ochotona_princeps
ENSPPAG00000043392	SAFB2	100	82.280	ENSODEG00000014751	SAFB2	100	82.176	Octodon_degus
ENSPPAG00000043392	SAFB2	100	89.854	ENSOGAG00000006855	SAFB2	100	89.040	Otolemur_garnettii
ENSPPAG00000043392	SAFB2	97	74.896	ENSOARG00000007982	SAFB2	67	85.137	Ovis_aries
ENSPPAG00000043392	SAFB2	100	87.736	ENSPPRG00000011310	SAFB2	100	87.736	Panthera_pardus
ENSPPAG00000043392	SAFB2	82	88.043	ENSPTIG00000015120	SAFB2	91	88.043	Panthera_tigris_altaica
ENSPPAG00000043392	SAFB2	100	93.914	ENSPTRG00000010334	SAFB2	100	93.914	Pan_troglodytes
ENSPPAG00000043392	SAFB2	100	98.636	ENSPANG00000007004	SAFB2	100	98.636	Papio_anubis
ENSPPAG00000043392	SAFB2	100	67.896	ENSPEMG00000016015	Safb2	100	67.597	Peromyscus_maniculatus_bairdii
ENSPPAG00000043392	SAFB2	64	75.163	ENSPCIG00000009518	-	99	78.821	Phascolarctos_cinereus
ENSPPAG00000043392	SAFB2	100	99.056	ENSPPYG00000009427	SAFB2	100	99.056	Pongo_abelii
ENSPPAG00000043392	SAFB2	100	80.312	ENSPCAG00000006352	SAFB2	99	81.866	Procavia_capensis
ENSPPAG00000043392	SAFB2	100	87.736	ENSPCOG00000023260	SAFB2	100	85.983	Propithecus_coquereli
ENSPPAG00000043392	SAFB2	58	86.957	ENSPVAG00000004902	-	71	86.957	Pteropus_vampyrus
ENSPPAG00000043392	SAFB2	82	69.539	ENSRNOG00000049511	AABR07066522.1	100	67.597	Rattus_norvegicus
ENSPPAG00000043392	SAFB2	83	99.124	ENSRBIG00000033446	SAFB2	100	99.124	Rhinopithecus_bieti
ENSPPAG00000043392	SAFB2	100	98.426	ENSRROG00000006606	SAFB2	100	98.426	Rhinopithecus_roxellana
ENSPPAG00000043392	SAFB2	100	95.483	ENSSBOG00000032315	SAFB2	100	96.231	Saimiri_boliviensis_boliviensis
ENSPPAG00000043392	SAFB2	98	72.038	ENSSHAG00000012703	SAFB2	100	70.772	Sarcophilus_harrisii
ENSPPAG00000043392	SAFB2	81	72.423	ENSSARG00000000649	SAFB2	100	72.423	Sorex_araneus
ENSPPAG00000043392	SAFB2	100	89.110	ENSSSCG00000013523	SAFB2	100	89.110	Sus_scrofa
ENSPPAG00000043392	SAFB2	77	79.127	ENSTBEG00000012709	SAFB2	86	79.127	Tupaia_belangeri
ENSPPAG00000043392	SAFB2	93	80.717	ENSTTRG00000013585	SAFB2	93	80.493	Tursiops_truncatus
ENSPPAG00000043392	SAFB2	98	88.474	ENSUAMG00000024695	SAFB2	97	88.474	Ursus_americanus
ENSPPAG00000043392	SAFB2	86	86.311	ENSUMAG00000009585	SAFB2	90	86.311	Ursus_maritimus
ENSPPAG00000043392	SAFB2	74	90.625	ENSVPAG00000012041	SAFB2	89	90.625	Vicugna_pacos
ENSPPAG00000043392	SAFB2	100	88.901	ENSVVUG00000013695	SAFB2	100	88.901	Vulpes_vulpes