EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPPAG00000043734 (Gene tree)
Gene ID
100978542
Gene Symbol
-
Alias
-
Full Name
RNA polymerase II subunit A
Gene Type
protein_coding
Species
Pan_paniscus
Status
putative
Strand
Plus strand
Length
29715 bases
Position
chr17:7502807-7532521
Accession
100978542
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPPAP00000042350RNA_pol_Rpb1_5PF04998.171.1e-10011
ENSPPAP00000042348RNA_pol_Rpb1_5PF04998.171.2e-10011
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-31148
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-31248
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-31348
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-31448
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-31548
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-31648
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-31748
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-31848
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-31948
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-311048
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-311148
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-311248
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-311348
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-311448
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-311548
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-311648
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-311748
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-311848
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-311948
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-312048
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-312148
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-312248
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-312348
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-312448
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-312548
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-312648
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-312748
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-312848
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-312948
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-313048
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-313148
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-313248
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-313348
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-313448
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-313548
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-313648
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-313748
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-313848
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-313948
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-314048
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-314148
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-314248
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-314348
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-314448
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-314548
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-314648
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-314748
ENSPPAP00000042350RNA_pol_Rpb1_RPF05001.131.7e-314848
ENSPPAP00000042348RNA_pol_Rpb1_RPF05001.134.3e-09125
ENSPPAP00000042348RNA_pol_Rpb1_RPF05001.134.3e-09225
ENSPPAP00000042348RNA_pol_Rpb1_RPF05001.134.3e-09325
ENSPPAP00000042348RNA_pol_Rpb1_RPF05001.134.3e-09425
ENSPPAP00000042348RNA_pol_Rpb1_RPF05001.134.3e-09525
ENSPPAP00000042348RNA_pol_Rpb1_RPF05001.134.3e-09625
ENSPPAP00000042348RNA_pol_Rpb1_RPF05001.134.3e-09725
ENSPPAP00000042348RNA_pol_Rpb1_RPF05001.134.3e-09825
ENSPPAP00000042348RNA_pol_Rpb1_RPF05001.134.3e-09925
ENSPPAP00000042348RNA_pol_Rpb1_RPF05001.134.3e-091025
ENSPPAP00000042348RNA_pol_Rpb1_RPF05001.134.3e-091125
ENSPPAP00000042348RNA_pol_Rpb1_RPF05001.134.3e-091225
ENSPPAP00000042348RNA_pol_Rpb1_RPF05001.134.3e-091325
ENSPPAP00000042348RNA_pol_Rpb1_RPF05001.134.3e-091425
ENSPPAP00000042348RNA_pol_Rpb1_RPF05001.134.3e-091525
ENSPPAP00000042348RNA_pol_Rpb1_RPF05001.134.3e-091625
ENSPPAP00000042348RNA_pol_Rpb1_RPF05001.134.3e-091725
ENSPPAP00000042348RNA_pol_Rpb1_RPF05001.134.3e-091825
ENSPPAP00000042348RNA_pol_Rpb1_RPF05001.134.3e-091925
ENSPPAP00000042348RNA_pol_Rpb1_RPF05001.134.3e-092025
ENSPPAP00000042348RNA_pol_Rpb1_RPF05001.134.3e-092125
ENSPPAP00000042348RNA_pol_Rpb1_RPF05001.134.3e-092225
ENSPPAP00000042348RNA_pol_Rpb1_RPF05001.134.3e-092325
ENSPPAP00000042348RNA_pol_Rpb1_RPF05001.134.3e-092425
ENSPPAP00000042348RNA_pol_Rpb1_RPF05001.134.3e-092525
ENSPPAP00000042350RNA_pol_Rpb1_4PF05000.176.1e-3811
ENSPPAP00000042348RNA_pol_Rpb1_4PF05000.176.9e-3811
ENSPPAP00000042350RNA_pol_Rpb1_2PF00623.201.9e-7411
ENSPPAP00000042348RNA_pol_Rpb1_2PF00623.202.2e-7411
ENSPPAP00000042350RNA_pol_Rpb1_3PF04983.181.4e-4911
ENSPPAP00000042348RNA_pol_Rpb1_3PF04983.181.6e-4911
ENSPPAP00000042350RNA_pol_Rpb1_1PF04997.129.2e-10911
ENSPPAP00000042348RNA_pol_Rpb1_1PF04997.129.9e-10911
ENSPPAP00000042350RNA_pol_Rpb1_7PF04990.123.5e-5411
ENSPPAP00000042348RNA_pol_Rpb1_7PF04990.123.7e-5411
ENSPPAP00000042350RNA_pol_Rpb1_6PF04992.142.4e-6711
ENSPPAP00000042348RNA_pol_Rpb1_6PF04992.142.6e-6711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPPAT00000065280-5766XM_008962447ENSPPAP000000423501921 (aa)XP_008960695A0A2R9CK57
ENSPPAT00000065278-6048-ENSPPAP000000423482015 (aa)-A0A2R9CMR6
Gene Model
Click here to download ENSPPAG00000043734's gene model file
Pathways
Pathway IDPathway NameSource
pps03020RNA polymeraseKEGG
pps05016Huntington diseaseKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000043734's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPPAG00000043734-6336.517ENSPPAG00000042450POLR1A8830.769
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPPAG00000043734-8291.940ENSAPOG00000006552polr2a9291.943Acanthochromis_polyacanthus
ENSPPAG00000043734-10097.111ENSAMEG00000016265-10096.503Ailuropoda_melanoleuca
ENSPPAG00000043734-8990.338ENSACIG00000015982polr2a8194.690Amphilophus_citrinellus
ENSPPAG00000043734-9794.222ENSAOCG00000004255polr2a9391.943Amphiprion_ocellaris
ENSPPAG00000043734-8990.277ENSAPEG00000012623polr2a8194.626Amphiprion_percula
ENSPPAG00000043734-8990.154ENSATEG00000019644polr2a8194.498Anabas_testudineus
ENSPPAG00000043734-10095.888ENSACAG00000014561POLR2A9395.253Anolis_carolinensis
ENSPPAG00000043734-10099.379ENSANAG00000020093-10099.379Aotus_nancymaae
ENSPPAG00000043734-8990.031ENSACLG00000006735polr2a8194.306Astatotilapia_calliptera
ENSPPAG00000043734-8990.400ENSAMXG00000020046polr2a8194.754Astyanax_mexicanus
ENSPPAG00000043734-10097.360ENSBTAG00000046765POLR2A10096.853Bos_taurus
ENSPPAG00000043734-8969.957WBGene00000123ama-19572.727Caenorhabditis_elegans
ENSPPAG00000043734-10096.954ENSCAFG00000016532POLR2A10097.935Canis_familiaris
ENSPPAG00000043734-10098.654ENSCAFG00020007929-10098.654Canis_lupus_dingo
ENSPPAG00000043734-10097.360ENSCHIG00000027173-10096.853Capra_hircus
ENSPPAG00000043734-10099.379ENSTSYG00000012803-10099.379Carlito_syrichta
ENSPPAG00000043734-9893.059ENSCAPG00000001882-9895.292Cavia_aperea
ENSPPAG00000043734-10094.799ENSCPOG00000014812-9998.848Cavia_porcellus
ENSPPAG00000043734-10099.379ENSCCAG00000020938-10099.379Cebus_capucinus
ENSPPAG00000043734-10098.654ENSCATG00000013680-10098.654Cercocebus_atys
ENSPPAG00000043734-10099.224ENSCLAG00000012196-10099.224Chinchilla_lanigera
ENSPPAG00000043734-10089.848ENSCSAG00000011644-9387.834Chlorocebus_sabaeus
ENSPPAG00000043734-10091.523ENSCPBG00000012697POLR2A10090.914Chrysemys_picta_bellii
ENSPPAG00000043734-9975.881ENSCING00000007884-9975.594Ciona_intestinalis
ENSPPAG00000043734-9674.800ENSCSAVG00000008334-9980.357Ciona_savignyi
ENSPPAG00000043734-10097.895ENSCANG00000010622-10097.895Colobus_angolensis_palliatus
ENSPPAG00000043734-10094.979ENSCGRG00001003538Polr2a10094.979Cricetulus_griseus_chok1gshd
ENSPPAG00000043734-9595.109ENSCGRG00000012105Polr2a9995.109Cricetulus_griseus_crigri
ENSPPAG00000043734-9091.355ENSCSEG00000002635polr2a8193.858Cynoglossus_semilaevis
ENSPPAG00000043734-8392.213ENSCVAG00000005156polr2a8292.742Cyprinodon_variegatus
ENSPPAG00000043734-8291.760ENSDARG00000099966polr2a8191.818Danio_rerio
ENSPPAG00000043734-10094.416ENSDNOG00000016482-10093.909Dasypus_novemcinctus
ENSPPAG00000043734-10099.379ENSDORG00000008667Polr2a10099.379Dipodomys_ordii
ENSPPAG00000043734-9969.604FBgn0003277RpII2159974.417Drosophila_melanogaster
ENSPPAG00000043734-9490.813ENSETEG00000002540-8792.647Echinops_telfairi
ENSPPAG00000043734-8186.170ENSEBUG00000013967polr2a8785.285Eptatretus_burgeri
ENSPPAG00000043734-8197.826ENSEASG00005019114-8297.825Equus_asinus_asinus
ENSPPAG00000043734-10097.411ENSECAG00000018485POLR2A10096.904Equus_caballus
ENSPPAG00000043734-8999.800ENSEEUG00000001154-9599.800Erinaceus_europaeus
ENSPPAG00000043734-8992.371ENSELUG00000014284polr2a8392.757Esox_lucius
ENSPPAG00000043734-10098.714ENSFDAG00000008287-10098.714Fukomys_damarensis
ENSPPAG00000043734-8992.002ENSFHEG00000001768polr2a9892.005Fundulus_heteroclitus
ENSPPAG00000043734-9488.406ENSGMOG00000007725polr2a10088.617Gadus_morhua
ENSPPAG00000043734-10094.366ENSGAFG00000005389polr2a9991.943Gambusia_affinis
ENSPPAG00000043734-9988.882ENSGACG00000019366polr2a9492.263Gasterosteus_aculeatus
ENSPPAG00000043734-10096.948ENSGGOG00000014800-10096.948Gorilla_gorilla
ENSPPAG00000043734-9293.905ENSHBUG00000018937polr2a9991.818Haplochromis_burtoni
ENSPPAG00000043734-10099.327ENSHGLG00000012381POLR2A10099.327Heterocephalus_glaber_female
ENSPPAG00000043734-10099.327ENSHGLG00100014843POLR2A10099.327Heterocephalus_glaber_male
ENSPPAG00000043734-8291.321ENSHCOG00000011874polr2a8191.630Hippocampus_comes
ENSPPAG00000043734-8989.785ENSIPUG00000002613Polr2a8194.114Ictalurus_punctatus
ENSPPAG00000043734-10099.379ENSSTOG00000001304-10099.379Ictidomys_tridecemlineatus
ENSPPAG00000043734-10099.275ENSJJAG00000013049Polr2a10099.275Jaculus_jaculus
ENSPPAG00000043734-8183.512ENSKMAG00000016343polr2a8584.852Kryptolebias_marmoratus
ENSPPAG00000043734-8989.908ENSLBEG00000027652polr2a8194.242Labrus_bergylta
ENSPPAG00000043734-8984.731ENSLACG00000012071POLR2A9296.970Latimeria_chalumnae
ENSPPAG00000043734-9589.461ENSLOCG00000013863polr2a8693.043Lepisosteus_oculatus
ENSPPAG00000043734-10097.411ENSLAFG00000008626-10096.904Loxodonta_africana
ENSPPAG00000043734-5198.366ENSMFAG00000007042-9998.366Macaca_fascicularis
ENSPPAG00000043734-10099.327ENSMMUG00000023620-10099.327Macaca_mulatta
ENSPPAG00000043734-10098.504ENSMNEG00000040407-10098.504Macaca_nemestrina
ENSPPAG00000043734-9994.303ENSMLEG00000030263-9998.366Mandrillus_leucophaeus
ENSPPAG00000043734-8291.692ENSMAMG00000003351polr2a8191.818Mastacembelus_armatus
ENSPPAG00000043734-8989.108ENSMZEG00005021429polr2a8193.346Maylandia_zebra
ENSPPAG00000043734-51100.000ENSMAUG00000021055-99100.000Mesocricetus_auratus
ENSPPAG00000043734-10098.551ENSMICG00000013372-10098.551Microcebus_murinus
ENSPPAG00000043734-10095.147ENSMOCG00000018279Polr2a10092.497Microtus_ochrogaster
ENSPPAG00000043734-8291.259ENSMMOG00000012515polr2a9491.255Mola_mola
ENSPPAG00000043734-10097.005ENSMODG00000007009-9396.627Monodelphis_domestica
ENSPPAG00000043734-8894.106ENSMALG00000008716polr2a9794.562Monopterus_albus
ENSPPAG00000043734-10099.327MGP_CAROLIEiJ_G0016587Polr2a10099.327Mus_caroli
ENSPPAG00000043734-10099.327ENSMUSG00000005198Polr2a10099.327Mus_musculus
ENSPPAG00000043734-10095.599MGP_PahariEiJ_G0017718Polr2a10095.094Mus_pahari
ENSPPAG00000043734-10099.327MGP_SPRETEiJ_G0017423Polr2a10099.327Mus_spretus
ENSPPAG00000043734-10097.310ENSMPUG00000009648-9397.127Mustela_putorius_furo
ENSPPAG00000043734-10096.907ENSMLUG00000009088-9396.631Myotis_lucifugus
ENSPPAG00000043734-10099.379ENSNGAG00000002543Polr2a10099.379Nannospalax_galili
ENSPPAG00000043734-8990.092ENSNBRG00000002005polr2a8194.370Neolamprologus_brichardi
ENSPPAG00000043734-10099.379ENSNLEG00000009460-10099.379Nomascus_leucogenys
ENSPPAG00000043734-9399.455ENSMEUG00000008611-9399.455Notamacropus_eugenii
ENSPPAG00000043734-8097.284ENSOPRG00000015116-9998.739Ochotona_princeps
ENSPPAG00000043734-10097.299ENSODEG00000017674-10096.993Octodon_degus
ENSPPAG00000043734-8291.816ENSONIG00000009231polr2a8192.005Oreochromis_niloticus
ENSPPAG00000043734-9995.348ENSOCUG00000017929-10097.002Oryctolagus_cuniculus
ENSPPAG00000043734-8989.969ENSORLG00000006431polr2a8194.306Oryzias_latipes
ENSPPAG00000043734-8989.969ENSORLG00020010235polr2a8194.306Oryzias_latipes_hni
ENSPPAG00000043734-8989.969ENSORLG00015007075polr2a8194.306Oryzias_latipes_hsok
ENSPPAG00000043734-9892.135ENSOMEG00000010713polr2a9994.509Oryzias_melastigma
ENSPPAG00000043734-10097.259ENSOGAG00000033608-9397.064Otolemur_garnettii
ENSPPAG00000043734-9697.090ENSOARG00000013874-10094.928Ovis_aries
ENSPPAG00000043734-10099.379ENSPTRG00000008691POLR2A10099.379Pan_troglodytes
ENSPPAG00000043734-10098.654ENSPANG00000024099-10098.654Papio_anubis
ENSPPAG00000043734-7892.620ENSPKIG00000005727polr2a8286.724Paramormyrops_kingsleyae
ENSPPAG00000043734-9893.685ENSPSIG00000014006POLR2A10093.934Pelodiscus_sinensis
ENSPPAG00000043734-10093.781ENSPMGG00000019734polr2a9994.690Periophthalmus_magnuspinnatus
ENSPPAG00000043734-10099.379ENSPEMG00000012521Polr2a10099.379Peromyscus_maniculatus_bairdii
ENSPPAG00000043734-9684.934ENSPCIG00000028851-9784.557Phascolarctos_cinereus
ENSPPAG00000043734-8392.152ENSPFOG00000007890polr2a8491.943Poecilia_formosa
ENSPPAG00000043734-8592.132ENSPLAG00000007399polr2a9992.519Poecilia_latipinna
ENSPPAG00000043734-8594.222ENSPMEG00000002071polr2a9994.626Poecilia_mexicana
ENSPPAG00000043734-8990.215ENSPREG00000013122polr2a8194.562Poecilia_reticulata
ENSPPAG00000043734-10097.093ENSPPYG00000007924-10096.583Pongo_abelii
ENSPPAG00000043734-9299.868ENSPCAG00000006951-8599.868Procavia_capensis
ENSPPAG00000043734-10099.327ENSPCOG00000025260-10099.327Propithecus_coquereli
ENSPPAG00000043734-10097.157ENSPVAG00000005069-9396.939Pteropus_vampyrus
ENSPPAG00000043734-8894.499ENSPNYG00000022340polr2a8191.880Pundamilia_nyererei
ENSPPAG00000043734-8292.002ENSPNAG00000011237polr2a8192.067Pygocentrus_nattereri
ENSPPAG00000043734-10097.310ENSRNOG00000028834Polr2a10096.802Rattus_norvegicus
ENSPPAG00000043734-10096.317ENSRBIG00000002471-10098.699Rhinopithecus_bieti
ENSPPAG00000043734-10097.453ENSRROG00000029583-10097.248Rhinopithecus_roxellana
ENSPPAG00000043734-8588.000YDL140CRPO219980.180Saccharomyces_cerevisiae
ENSPPAG00000043734-10099.379ENSSBOG00000000808-10099.379Saimiri_boliviensis_boliviensis
ENSPPAG00000043734-10095.907ENSSHAG00000002858-10094.742Sarcophilus_harrisii
ENSPPAG00000043734-8792.091ENSSFOG00015023275polr2a8194.562Scleropages_formosus
ENSPPAG00000043734-8991.478ENSSMAG00000009137polr2a8291.998Scophthalmus_maximus
ENSPPAG00000043734-8990.154ENSSDUG00000020466polr2a8194.498Seriola_dumerili
ENSPPAG00000043734-8990.154ENSSLDG00000020613polr2a8194.498Seriola_lalandi_dorsalis
ENSPPAG00000043734-9692.225ENSSARG00000005875-9992.604Sorex_araneus
ENSPPAG00000043734-10091.878ENSSPAG00000016741polr2a9491.880Stegastes_partitus
ENSPPAG00000043734-10096.650ENSSSCG00000028278-9396.315Sus_scrofa
ENSPPAG00000043734-9886.104ENSTRUG00000012320polr2a8186.375Takifugu_rubripes
ENSPPAG00000043734-9290.267ENSTNIG00000010136polr2a10090.256Tetraodon_nigroviridis
ENSPPAG00000043734-76100.000ENSTBEG00000013294-58100.000Tupaia_belangeri
ENSPPAG00000043734-10095.838ENSTTRG00000014273-9395.315Tursiops_truncatus
ENSPPAG00000043734-9694.699ENSUAMG00000014866-9999.489Ursus_americanus
ENSPPAG00000043734-9994.759ENSUMAG00000015732-10094.637Ursus_maritimus
ENSPPAG00000043734-63100.000ENSVPAG00000008842-76100.000Vicugna_pacos
ENSPPAG00000043734-10094.405ENSVVUG00000027878-10096.223Vulpes_vulpes
ENSPPAG00000043734-9994.507ENSXETG00000012465polr2a10093.994Xenopus_tropicalis
ENSPPAG00000043734-8694.159ENSXCOG00000001804polr2a9494.562Xiphophorus_couchianus
ENSPPAG00000043734-8990.215ENSXMAG00000015687polr2a8194.562Xiphophorus_maculatus

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