EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000043745 (Gene tree)
Gene ID: -
Gene Symbol: PABPC4L
Alias: -
Full Name: poly(A) binding protein cytoplasmic 4 like
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 34594 bases
Position: chr4:137740404-137774997
Accession: 31955
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000042340	RRM_5	PF13893.6	2e-10	1	2
ENSPPAP00000042340	RRM_5	PF13893.6	2e-10	2	2
ENSPPAP00000042340	RRM_1	PF00076.22	2.2e-71	1	3
ENSPPAP00000042340	RRM_1	PF00076.22	2.2e-71	2	3
ENSPPAP00000042340	RRM_1	PF00076.22	2.2e-71	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000065270	PABPC4L-201	1281	-	ENSPPAP00000042340	352 (aa)	-	A0A2R9CK48

Gene Model

Click here to download ENSPPAG00000043745's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000043745's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000043745	PABPC4L	89	31.707	ENSPPAG00000035262	ELAVL1	82	31.707
ENSPPAG00000043745	PABPC4L	94	63.265	ENSPPAG00000012920	-	98	63.265
ENSPPAG00000043745	PABPC4L	52	31.383	ENSPPAG00000030037	-	69	31.383
ENSPPAG00000043745	PABPC4L	92	74.691	ENSPPAG00000043625	PABPC4	61	74.691
ENSPPAG00000043745	PABPC4L	92	67.284	ENSPPAG00000037498	-	69	66.890
ENSPPAG00000043745	PABPC4L	65	36.486	ENSPPAG00000034179	RBM3	81	36.232
ENSPPAG00000043745	PABPC4L	68	32.051	ENSPPAG00000018027	HNRNPA1	55	32.051
ENSPPAG00000043745	PABPC4L	69	32.927	ENSPPAG00000033927	TRNAU1AP	86	37.500
ENSPPAG00000043745	PABPC4L	88	35.484	ENSPPAG00000041539	ELAVL2	69	35.484
ENSPPAG00000043745	PABPC4L	91	59.810	ENSPPAG00000007378	PABPC5	96	59.877
ENSPPAG00000043745	PABPC4L	93	54.150	ENSPPAG00000037955	-	63	55.066
ENSPPAG00000043745	PABPC4L	95	61.162	ENSPPAG00000039677	PABPC1L	63	61.162
ENSPPAG00000043745	PABPC4L	52	34.722	ENSPPAG00000033870	CELF1	79	34.722

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000043745	PABPC4L	93	99.690	ENSG00000254535	PABPC4L	99	99.690	Homo_sapiens
ENSPPAG00000043745	PABPC4L	93	96.594	ENSANAG00000017199	PABPC4L	87	96.594	Aotus_nancymaae
ENSPPAG00000043745	PABPC4L	93	89.474	ENSBTAG00000046902	PABPC4L	99	89.474	Bos_taurus
ENSPPAG00000043745	PABPC4L	93	96.904	ENSCJAG00000045332	PABPC4L	87	96.904	Callithrix_jacchus
ENSPPAG00000043745	PABPC4L	93	73.684	ENSCAFG00020019182	-	54	73.684	Canis_lupus_dingo
ENSPPAG00000043745	PABPC4L	93	89.474	ENSCHIG00000007231	PABPC4L	99	89.474	Capra_hircus
ENSPPAG00000043745	PABPC4L	89	80.903	ENSCAPG00000000555	PABPC4L	100	80.903	Cavia_aperea
ENSPPAG00000043745	PABPC4L	92	78.019	ENSCPOG00000033167	PABPC4L	100	78.019	Cavia_porcellus
ENSPPAG00000043745	PABPC4L	93	96.904	ENSCCAG00000031681	PABPC4L	87	96.904	Cebus_capucinus
ENSPPAG00000043745	PABPC4L	93	83.901	ENSCLAG00000017628	PABPC4L	99	83.901	Chinchilla_lanigera
ENSPPAG00000043745	PABPC4L	93	98.142	ENSCANG00000037677	PABPC4L	99	98.142	Colobus_angolensis_palliatus
ENSPPAG00000043745	PABPC4L	93	82.972	ENSCGRG00001002070	Pabpc4l	99	82.972	Cricetulus_griseus_chok1gshd
ENSPPAG00000043745	PABPC4L	93	82.972	ENSCGRG00000020086	Pabpc4l	99	82.972	Cricetulus_griseus_crigri
ENSPPAG00000043745	PABPC4L	93	91.950	ENSDNOG00000031077	PABPC4L	95	91.950	Dasypus_novemcinctus
ENSPPAG00000043745	PABPC4L	93	90.402	ENSEASG00005007883	PABPC4L	99	90.402	Equus_asinus_asinus
ENSPPAG00000043745	PABPC4L	93	90.402	ENSECAG00000031416	PABPC4L	99	90.402	Equus_caballus
ENSPPAG00000043745	PABPC4L	93	90.712	ENSFCAG00000028270	PABPC4L	99	90.712	Felis_catus
ENSPPAG00000043745	PABPC4L	93	84.211	ENSFDAG00000019606	PABPC4L	99	84.211	Fukomys_damarensis
ENSPPAG00000043745	PABPC4L	93	99.690	ENSGGOG00000024991	PABPC4L	99	99.690	Gorilla_gorilla
ENSPPAG00000043745	PABPC4L	92	83.901	ENSHGLG00000020104	PABPC4L	99	83.901	Heterocephalus_glaber_female
ENSPPAG00000043745	PABPC4L	92	83.901	ENSHGLG00100020648	PABPC4L	99	83.901	Heterocephalus_glaber_male
ENSPPAG00000043745	PABPC4L	93	87.963	ENSSTOG00000019472	PABPC4L	99	87.963	Ictidomys_tridecemlineatus
ENSPPAG00000043745	PABPC4L	93	83.282	ENSJJAG00000004090	Pabpc4l	99	83.282	Jaculus_jaculus
ENSPPAG00000043745	PABPC4L	93	83.591	ENSMAUG00000016313	Pabpc4l	99	83.591	Mesocricetus_auratus
ENSPPAG00000043745	PABPC4L	93	94.427	ENSMICG00000029683	PABPC4L	99	94.427	Microcebus_murinus
ENSPPAG00000043745	PABPC4L	93	84.520	ENSMOCG00000007551	Pabpc4l	99	84.520	Microtus_ochrogaster
ENSPPAG00000043745	PABPC4L	93	80.495	MGP_CAROLIEiJ_G0024968	Pabpc4l	100	80.233	Mus_caroli
ENSPPAG00000043745	PABPC4L	93	80.814	ENSMUSG00000090919	Pabpc4l	100	80.814	Mus_musculus
ENSPPAG00000043745	PABPC4L	93	81.395	MGP_PahariEiJ_G0026409	Pabpc4l	100	81.395	Mus_pahari
ENSPPAG00000043745	PABPC4L	93	80.233	MGP_SPRETEiJ_G0025903	Pabpc4l	100	80.233	Mus_spretus
ENSPPAG00000043745	PABPC4L	92	78.947	ENSMLUG00000008254	PABPC4L	99	78.947	Myotis_lucifugus
ENSPPAG00000043745	PABPC4L	93	87.307	ENSNGAG00000001502	Pabpc4l	99	87.307	Nannospalax_galili
ENSPPAG00000043745	PABPC4L	93	99.690	ENSNLEG00000019300	PABPC4L	99	99.690	Nomascus_leucogenys
ENSPPAG00000043745	PABPC4L	92	86.997	ENSOGAG00000026166	PABPC4L	99	86.997	Otolemur_garnettii
ENSPPAG00000043745	PABPC4L	93	90.093	ENSPPRG00000018628	PABPC4L	99	90.093	Panthera_pardus
ENSPPAG00000043745	PABPC4L	93	90.712	ENSPTIG00000010106	PABPC4L	99	90.712	Panthera_tigris_altaica
ENSPPAG00000043745	PABPC4L	100	100.000	ENSPTRG00000045513	-	82	100.000	Pan_troglodytes
ENSPPAG00000043745	PABPC4L	93	83.282	ENSPEMG00000012565	Pabpc4l	99	83.282	Peromyscus_maniculatus_bairdii
ENSPPAG00000043745	PABPC4L	93	94.427	ENSPCOG00000025578	PABPC4L	99	94.427	Propithecus_coquereli
ENSPPAG00000043745	PABPC4L	92	81.424	ENSRNOG00000029749	Pabpc4l	99	81.424	Rattus_norvegicus
ENSPPAG00000043745	PABPC4L	93	97.523	ENSRBIG00000030229	PABPC4L	99	97.523	Rhinopithecus_bieti
ENSPPAG00000043745	PABPC4L	93	97.523	ENSRROG00000020367	PABPC4L	99	97.523	Rhinopithecus_roxellana
ENSPPAG00000043745	PABPC4L	93	94.427	ENSSBOG00000016382	PABPC4L	99	94.427	Saimiri_boliviensis_boliviensis
ENSPPAG00000043745	PABPC4L	92	82.972	ENSSSCG00000009067	PABPC4L	96	82.972	Sus_scrofa
ENSPPAG00000043745	PABPC4L	93	89.474	ENSUAMG00000001289	PABPC4L	99	89.474	Ursus_americanus
ENSPPAG00000043745	PABPC4L	93	89.474	ENSUMAG00000014887	PABPC4L	99	89.474	Ursus_maritimus
ENSPPAG00000043745	PABPC4L	91	76.074	ENSVVUG00000011060	-	74	76.074	Vulpes_vulpes