EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000043806 (Gene tree)
Gene ID: 100985598
Gene Symbol: ATRX
Alias: -
Full Name: ATRX%2C chromatin remodeler
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 287913 bases
Position: chrX:76795574-77083486
Accession: 100985598
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000042575	ResIII	PF04851.15	1.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000065479	ATRX-201	10598	XM_003824402	ENSPPAP00000042549	2492 (aa)	XP_003824450	A0A2R9CKP8
ENSPPAT00000065482	ATRX-203	7774	-	ENSPPAP00000042552	2207 (aa)	-	A0A2R9CST0
ENSPPAT00000065480	ATRX-202	10484	XM_003824403	ENSPPAP00000042550	2454 (aa)	XP_003824451	A0A2R9CKN0
ENSPPAT00000065500	ATRX-205	7401	-	ENSPPAP00000042570	2466 (aa)	-	A0A2R9CKP9
ENSPPAT00000065505	ATRX-206	2979	-	ENSPPAP00000042575	992 (aa)	-	A0A2R9CKQ7
ENSPPAT00000065498	ATRX-204	7461	-	ENSPPAP00000042568	2486 (aa)	-	A0A2R9CN52

Gene Model

Click here to download ENSPPAG00000043806's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000043806's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000043806	ATRX	50	38.916	ENSPPAG00000031222	RAD54L	67	38.916
ENSPPAG00000043806	ATRX	51	38.235	ENSPPAG00000035061	ERCC6L2	65	38.235
ENSPPAG00000043806	ATRX	52	38.068	ENSPPAG00000001726	HELLS	56	38.068

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000043806	ATRX	100	55.733	ENSATEG00000012096	-	50	55.000	Anabas_testudineus
ENSPPAG00000043806	ATRX	99	96.247	ENSCANG00000031935	ATRX	99	96.247	Colobus_angolensis_palliatus
ENSPPAG00000043806	ATRX	85	44.948	FBgn0039338	XNP	69	47.193	Drosophila_melanogaster
ENSPPAG00000043806	ATRX	99	99.899	ENSGGOG00000024999	ATRX	99	99.899	Gorilla_gorilla
ENSPPAG00000043806	ATRX	99	99.594	ENSMFAG00000031719	ATRX	99	99.594	Macaca_fascicularis
ENSPPAG00000043806	ATRX	99	99.594	ENSMNEG00000033171	ATRX	99	99.594	Macaca_nemestrina
ENSPPAG00000043806	ATRX	99	99.696	ENSMLEG00000036012	ATRX	99	99.696	Mandrillus_leucophaeus
ENSPPAG00000043806	ATRX	99	99.797	ENSNLEG00000001144	ATRX	99	99.797	Nomascus_leucogenys
ENSPPAG00000043806	ATRX	100	99.899	ENSPTRG00000022047	ATRX	100	99.899	Pan_troglodytes
ENSPPAG00000043806	ATRX	99	99.594	ENSPANG00000024984	ATRX	99	99.594	Papio_anubis
ENSPPAG00000043806	ATRX	100	95.005	ENSPEMG00000022358	-	98	95.405	Peromyscus_maniculatus_bairdii