EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPPAG00000043889 (Gene tree)
Gene ID: 100992172
Gene Symbol: -
Alias: -
Full Name: SBDS%2C ribosome maturation factor
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 10417 bases
Position: chr7:74019991-74030407
Accession: 100992172
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000042675	SBDS	PF01172.18	9.8e-33	1	1
ENSPPAP00000042675	SBDS_C	PF09377.10	4.1e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000065605	-	4082	XM_003814524	ENSPPAP00000042675	250 (aa)	XP_003814572	A0A2R9CL09

Gene Model

Click here to download ENSPPAG00000043889's gene model file

Pathways

Pathway ID	Pathway Name	Source
pps03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000043889's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000043889	-	100	99.200	ENSG00000126524	SBDS	100	99.200	Homo_sapiens
ENSPPAG00000043889	-	99	82.329	ENSAPOG00000014285	sbds	100	82.329	Acanthochromis_polyacanthus
ENSPPAG00000043889	-	100	98.000	ENSAMEG00000018167	SBDS	100	98.000	Ailuropoda_melanoleuca
ENSPPAG00000043889	-	99	81.746	ENSACIG00000007308	sbds	100	81.746	Amphilophus_citrinellus
ENSPPAG00000043889	-	99	82.329	ENSAOCG00000016770	sbds	100	82.329	Amphiprion_ocellaris
ENSPPAG00000043889	-	99	82.731	ENSAPEG00000015897	sbds	100	82.731	Amphiprion_percula
ENSPPAG00000043889	-	99	82.731	ENSATEG00000006901	sbds	100	82.731	Anabas_testudineus
ENSPPAG00000043889	-	92	92.208	ENSANAG00000024342	-	97	92.208	Aotus_nancymaae
ENSPPAG00000043889	-	83	98.551	ENSANAG00000037501	-	100	98.551	Aotus_nancymaae
ENSPPAG00000043889	-	99	83.133	ENSACLG00000018750	sbds	100	83.133	Astatotilapia_calliptera
ENSPPAG00000043889	-	100	83.600	ENSAMXG00000005361	sbds	100	83.600	Astyanax_mexicanus
ENSPPAG00000043889	-	100	98.000	ENSBTAG00000004051	SBDS	100	98.000	Bos_taurus
ENSPPAG00000043889	-	98	56.098	WBGene00021063	sbds-1	97	56.098	Caenorhabditis_elegans
ENSPPAG00000043889	-	100	98.000	ENSCJAG00000041007	SBDS	100	98.000	Callithrix_jacchus
ENSPPAG00000043889	-	100	96.032	ENSCAFG00000010797	SBDS	100	96.032	Canis_familiaris
ENSPPAG00000043889	-	100	98.400	ENSCAFG00020005357	SBDS	100	98.400	Canis_lupus_dingo
ENSPPAG00000043889	-	100	98.800	ENSCHIG00000026854	SBDS	100	98.800	Capra_hircus
ENSPPAG00000043889	-	100	99.200	ENSTSYG00000033822	SBDS	100	99.200	Carlito_syrichta
ENSPPAG00000043889	-	66	96.341	ENSCAPG00000006634	SBDS	100	96.341	Cavia_aperea
ENSPPAG00000043889	-	100	97.600	ENSCPOG00000036143	SBDS	100	97.600	Cavia_porcellus
ENSPPAG00000043889	-	100	98.800	ENSCCAG00000020671	SBDS	100	98.800	Cebus_capucinus
ENSPPAG00000043889	-	100	99.200	ENSCATG00000039026	SBDS	100	99.200	Cercocebus_atys
ENSPPAG00000043889	-	99	70.565	ENSCLAG00000002113	-	99	70.565	Chinchilla_lanigera
ENSPPAG00000043889	-	100	97.200	ENSCLAG00000005721	-	100	97.200	Chinchilla_lanigera
ENSPPAG00000043889	-	100	99.200	ENSCSAG00000018275	SBDS	100	99.200	Chlorocebus_sabaeus
ENSPPAG00000043889	-	100	93.600	ENSCHOG00000003795	SBDS	100	93.600	Choloepus_hoffmanni
ENSPPAG00000043889	-	100	88.800	ENSCPBG00000014893	SBDS	100	88.800	Chrysemys_picta_bellii
ENSPPAG00000043889	-	99	66.000	ENSCSAVG00000011811	-	100	66.000	Ciona_savignyi
ENSPPAG00000043889	-	100	98.800	ENSCANG00000032368	SBDS	100	98.800	Colobus_angolensis_palliatus
ENSPPAG00000043889	-	66	93.902	ENSCGRG00001019886	Sbds	100	93.902	Cricetulus_griseus_chok1gshd
ENSPPAG00000043889	-	83	95.169	ENSCGRG00000009211	Sbds	100	95.169	Cricetulus_griseus_crigri
ENSPPAG00000043889	-	99	80.723	ENSCSEG00000005798	sbds	100	80.723	Cynoglossus_semilaevis
ENSPPAG00000043889	-	99	80.723	ENSCVAG00000001053	sbds	100	80.723	Cyprinodon_variegatus
ENSPPAG00000043889	-	100	83.200	ENSDARG00000027803	sbds	100	83.200	Danio_rerio
ENSPPAG00000043889	-	100	98.000	ENSDNOG00000041174	SBDS	100	98.000	Dasypus_novemcinctus
ENSPPAG00000043889	-	100	95.200	ENSDORG00000026218	Sbds	100	95.200	Dipodomys_ordii
ENSPPAG00000043889	-	90	58.333	FBgn0035714	CG8549	99	58.233	Drosophila_melanogaster
ENSPPAG00000043889	-	93	57.082	ENSEBUG00000015780	sbds	100	57.082	Eptatretus_burgeri
ENSPPAG00000043889	-	100	98.800	ENSEASG00005008821	SBDS	100	98.800	Equus_asinus_asinus
ENSPPAG00000043889	-	100	98.800	ENSECAG00000008202	SBDS	100	98.800	Equus_caballus
ENSPPAG00000043889	-	83	76.442	ENSEEUG00000004768	SBDS	100	76.442	Erinaceus_europaeus
ENSPPAG00000043889	-	100	81.200	ENSELUG00000008382	sbds	100	81.200	Esox_lucius
ENSPPAG00000043889	-	100	98.400	ENSFCAG00000022142	SBDS	100	98.400	Felis_catus
ENSPPAG00000043889	-	100	88.400	ENSFALG00000013808	SBDS	100	88.400	Ficedula_albicollis
ENSPPAG00000043889	-	100	97.600	ENSFDAG00000018947	-	100	97.600	Fukomys_damarensis
ENSPPAG00000043889	-	99	77.510	ENSFHEG00000000708	sbds	99	78.138	Fundulus_heteroclitus
ENSPPAG00000043889	-	100	83.200	ENSGMOG00000018356	sbds	99	83.200	Gadus_morhua
ENSPPAG00000043889	-	100	88.400	ENSGALG00000027989	SBDS	100	88.400	Gallus_gallus
ENSPPAG00000043889	-	92	77.391	ENSGAFG00000014204	sbds	100	77.391	Gambusia_affinis
ENSPPAG00000043889	-	99	81.526	ENSGACG00000012697	sbds	100	81.526	Gasterosteus_aculeatus
ENSPPAG00000043889	-	86	88.785	ENSGAGG00000022402	SBDS	100	88.785	Gopherus_agassizii
ENSPPAG00000043889	-	96	80.498	ENSGGOG00000040023	-	92	80.498	Gorilla_gorilla
ENSPPAG00000043889	-	99	83.133	ENSHBUG00000002660	sbds	100	83.133	Haplochromis_burtoni
ENSPPAG00000043889	-	100	96.000	ENSHGLG00000009671	SBDS	100	96.000	Heterocephalus_glaber_female
ENSPPAG00000043889	-	100	96.000	ENSHGLG00100011332	SBDS	100	96.000	Heterocephalus_glaber_male
ENSPPAG00000043889	-	99	80.723	ENSHCOG00000018606	sbds	100	80.723	Hippocampus_comes
ENSPPAG00000043889	-	100	84.400	ENSIPUG00000006536	sbds	100	84.400	Ictalurus_punctatus
ENSPPAG00000043889	-	100	93.600	ENSJJAG00000012033	-	100	93.600	Jaculus_jaculus
ENSPPAG00000043889	-	100	69.565	ENSJJAG00000003934	-	100	69.565	Jaculus_jaculus
ENSPPAG00000043889	-	99	83.133	ENSKMAG00000018542	sbds	100	83.133	Kryptolebias_marmoratus
ENSPPAG00000043889	-	99	79.518	ENSLBEG00000016687	sbds	100	79.518	Labrus_bergylta
ENSPPAG00000043889	-	100	69.685	ENSLACG00000018916	SBDS	100	69.685	Latimeria_chalumnae
ENSPPAG00000043889	-	100	86.800	ENSLOCG00000004073	sbds	100	86.800	Lepisosteus_oculatus
ENSPPAG00000043889	-	100	97.200	ENSLAFG00000008763	SBDS	100	97.200	Loxodonta_africana
ENSPPAG00000043889	-	100	99.200	ENSMFAG00000032620	SBDS	100	99.200	Macaca_fascicularis
ENSPPAG00000043889	-	100	99.200	ENSMMUG00000045653	SBDS	100	99.200	Macaca_mulatta
ENSPPAG00000043889	-	100	99.200	ENSMNEG00000031523	SBDS	100	99.200	Macaca_nemestrina
ENSPPAG00000043889	-	100	74.409	ENSMLEG00000036826	SBDS	100	74.409	Mandrillus_leucophaeus
ENSPPAG00000043889	-	99	82.329	ENSMAMG00000016062	sbds	100	82.329	Mastacembelus_armatus
ENSPPAG00000043889	-	99	83.133	ENSMZEG00005024385	sbds	100	83.133	Maylandia_zebra
ENSPPAG00000043889	-	100	88.400	ENSMGAG00000002119	SBDS	100	88.400	Meleagris_gallopavo
ENSPPAG00000043889	-	99	75.904	ENSMAUG00000022214	-	100	75.904	Mesocricetus_auratus
ENSPPAG00000043889	-	100	98.400	ENSMICG00000014366	SBDS	100	98.400	Microcebus_murinus
ENSPPAG00000043889	-	100	96.800	ENSMOCG00000011739	Sbds	100	96.800	Microtus_ochrogaster
ENSPPAG00000043889	-	99	73.200	ENSMMOG00000005061	sbds	100	72.800	Mola_mola
ENSPPAG00000043889	-	100	96.000	ENSMODG00000006644	SBDS	100	96.000	Monodelphis_domestica
ENSPPAG00000043889	-	99	82.329	ENSMALG00000010219	sbds	100	82.329	Monopterus_albus
ENSPPAG00000043889	-	100	96.800	MGP_CAROLIEiJ_G0027800	Sbds	100	97.674	Mus_caroli
ENSPPAG00000043889	-	100	96.400	ENSMUSG00000025337	Sbds	100	97.674	Mus_musculus
ENSPPAG00000043889	-	100	96.400	MGP_PahariEiJ_G0024384	Sbds	100	97.674	Mus_pahari
ENSPPAG00000043889	-	100	96.400	MGP_SPRETEiJ_G0028798	Sbds	100	97.674	Mus_spretus
ENSPPAG00000043889	-	67	92.262	ENSMPUG00000016192	SBDS	97	92.262	Mustela_putorius_furo
ENSPPAG00000043889	-	73	96.154	ENSMLUG00000013575	SBDS	100	96.154	Myotis_lucifugus
ENSPPAG00000043889	-	100	96.800	ENSNGAG00000012093	Sbds	100	96.800	Nannospalax_galili
ENSPPAG00000043889	-	99	83.133	ENSNBRG00000017027	sbds	100	83.133	Neolamprologus_brichardi
ENSPPAG00000043889	-	100	99.200	ENSNLEG00000013288	SBDS	100	99.200	Nomascus_leucogenys
ENSPPAG00000043889	-	100	95.200	ENSOPRG00000008721	SBDS	100	95.200	Ochotona_princeps
ENSPPAG00000043889	-	100	87.200	ENSODEG00000019253	-	84	87.200	Octodon_degus
ENSPPAG00000043889	-	99	71.486	ENSODEG00000000137	-	84	75.100	Octodon_degus
ENSPPAG00000043889	-	99	77.108	ENSODEG00000001116	-	99	77.108	Octodon_degus
ENSPPAG00000043889	-	99	82.329	ENSONIG00000005874	sbds	100	82.329	Oreochromis_niloticus
ENSPPAG00000043889	-	83	91.787	ENSOANG00000007674	-	100	91.787	Ornithorhynchus_anatinus
ENSPPAG00000043889	-	100	96.800	ENSOCUG00000003170	SBDS	100	96.800	Oryctolagus_cuniculus
ENSPPAG00000043889	-	99	79.518	ENSORLG00000023489	sbds	100	79.518	Oryzias_latipes
ENSPPAG00000043889	-	99	79.116	ENSORLG00020019282	sbds	100	79.116	Oryzias_latipes_hni
ENSPPAG00000043889	-	99	79.116	ENSORLG00015008005	sbds	100	79.116	Oryzias_latipes_hsok
ENSPPAG00000043889	-	99	79.920	ENSOMEG00000022747	sbds	100	79.920	Oryzias_melastigma
ENSPPAG00000043889	-	100	81.200	ENSOGAG00000015036	-	100	81.200	Otolemur_garnettii
ENSPPAG00000043889	-	100	97.600	ENSOGAG00000009011	-	100	97.600	Otolemur_garnettii
ENSPPAG00000043889	-	100	98.800	ENSOARG00000010609	SBDS	100	98.800	Ovis_aries
ENSPPAG00000043889	-	100	98.400	ENSPPRG00000002307	SBDS	100	98.400	Panthera_pardus
ENSPPAG00000043889	-	100	98.400	ENSPTIG00000021308	SBDS	100	98.400	Panthera_tigris_altaica
ENSPPAG00000043889	-	100	99.200	ENSPTRG00000019254	SBDS	100	99.200	Pan_troglodytes
ENSPPAG00000043889	-	87	97.235	ENSPTRG00000048174	-	96	97.235	Pan_troglodytes
ENSPPAG00000043889	-	100	86.000	ENSPTRG00000050835	-	100	86.000	Pan_troglodytes
ENSPPAG00000043889	-	100	85.600	ENSPTRG00000047744	-	100	85.600	Pan_troglodytes
ENSPPAG00000043889	-	100	98.800	ENSPANG00000004078	SBDS	100	98.800	Papio_anubis
ENSPPAG00000043889	-	100	83.600	ENSPKIG00000006489	sbds	100	83.600	Paramormyrops_kingsleyae
ENSPPAG00000043889	-	83	89.372	ENSPSIG00000014603	SBDS	99	89.372	Pelodiscus_sinensis
ENSPPAG00000043889	-	99	81.124	ENSPMGG00000004246	sbds	100	81.124	Periophthalmus_magnuspinnatus
ENSPPAG00000043889	-	100	96.400	ENSPEMG00000008728	Sbds	100	96.400	Peromyscus_maniculatus_bairdii
ENSPPAG00000043889	-	100	94.400	ENSPCIG00000029718	SBDS	100	94.400	Phascolarctos_cinereus
ENSPPAG00000043889	-	99	79.920	ENSPFOG00000015837	sbds	100	79.920	Poecilia_formosa
ENSPPAG00000043889	-	99	79.920	ENSPLAG00000003641	sbds	100	79.920	Poecilia_latipinna
ENSPPAG00000043889	-	99	79.920	ENSPMEG00000019483	sbds	100	79.920	Poecilia_mexicana
ENSPPAG00000043889	-	99	79.518	ENSPREG00000018758	sbds	100	79.518	Poecilia_reticulata
ENSPPAG00000043889	-	100	99.200	ENSPPYG00000017513	SBDS	100	99.200	Pongo_abelii
ENSPPAG00000043889	-	100	98.000	ENSPCOG00000021098	SBDS	100	98.000	Propithecus_coquereli
ENSPPAG00000043889	-	100	98.400	ENSPVAG00000009369	SBDS	100	98.400	Pteropus_vampyrus
ENSPPAG00000043889	-	99	82.731	ENSPNYG00000022403	sbds	100	82.731	Pundamilia_nyererei
ENSPPAG00000043889	-	100	84.400	ENSPNAG00000001120	sbds	100	84.400	Pygocentrus_nattereri
ENSPPAG00000043889	-	100	96.400	ENSRNOG00000000888	Sbds	100	96.400	Rattus_norvegicus
ENSPPAG00000043889	-	100	99.200	ENSRBIG00000035557	SBDS	100	99.200	Rhinopithecus_bieti
ENSPPAG00000043889	-	100	99.200	ENSRROG00000040842	-	100	99.200	Rhinopithecus_roxellana
ENSPPAG00000043889	-	100	80.800	ENSRROG00000041986	-	100	79.200	Rhinopithecus_roxellana
ENSPPAG00000043889	-	96	43.673	YLR022C	-	71	49.718	Saccharomyces_cerevisiae
ENSPPAG00000043889	-	93	98.276	ENSSBOG00000022460	SBDS	100	98.276	Saimiri_boliviensis_boliviensis
ENSPPAG00000043889	-	100	82.400	ENSSHAG00000010263	SBDS	100	82.400	Sarcophilus_harrisii
ENSPPAG00000043889	-	100	84.800	ENSSFOG00015001108	sbds	100	84.800	Scleropages_formosus
ENSPPAG00000043889	-	99	83.133	ENSSMAG00000020506	sbds	100	83.133	Scophthalmus_maximus
ENSPPAG00000043889	-	99	81.928	ENSSDUG00000001528	sbds	100	81.928	Seriola_dumerili
ENSPPAG00000043889	-	99	82.329	ENSSLDG00000003659	sbds	100	82.329	Seriola_lalandi_dorsalis
ENSPPAG00000043889	-	73	98.837	ENSSARG00000001899	-	73	98.837	Sorex_araneus
ENSPPAG00000043889	-	61	98.693	ENSSARG00000013132	-	100	98.693	Sorex_araneus
ENSPPAG00000043889	-	100	86.000	ENSSPUG00000002699	SBDS	100	86.000	Sphenodon_punctatus
ENSPPAG00000043889	-	99	82.329	ENSSPAG00000016419	sbds	100	74.800	Stegastes_partitus
ENSPPAG00000043889	-	100	98.400	ENSSSCG00000007732	SBDS	100	98.400	Sus_scrofa
ENSPPAG00000043889	-	66	87.879	ENSTGUG00000003426	SBDS	99	87.879	Taeniopygia_guttata
ENSPPAG00000043889	-	99	82.329	ENSTRUG00000021443	sbds	100	82.329	Takifugu_rubripes
ENSPPAG00000043889	-	99	81.124	ENSTNIG00000019000	sbds	100	81.124	Tetraodon_nigroviridis
ENSPPAG00000043889	-	83	84.135	ENSTBEG00000001178	SBDS	100	84.135	Tupaia_belangeri
ENSPPAG00000043889	-	100	78.400	ENSTTRG00000003921	SBDS	100	78.400	Tursiops_truncatus
ENSPPAG00000043889	-	100	98.000	ENSUAMG00000001326	SBDS	100	98.000	Ursus_americanus
ENSPPAG00000043889	-	100	98.000	ENSUMAG00000015353	SBDS	100	98.000	Ursus_maritimus
ENSPPAG00000043889	-	100	98.400	ENSVVUG00000016478	SBDS	100	98.400	Vulpes_vulpes
ENSPPAG00000043889	-	100	85.600	ENSXETG00000010093	sbds	100	85.600	Xenopus_tropicalis
ENSPPAG00000043889	-	99	73.896	ENSXCOG00000010639	sbds	100	73.896	Xiphophorus_couchianus
ENSPPAG00000043889	-	99	80.321	ENSXMAG00000006065	sbds	100	80.321	Xiphophorus_maculatus