EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000043941 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 4593 bases
Position: chr5:110060008-110064600
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000042775	LSM	PF01423.22	2.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000065706	-	246	-	ENSPPAP00000042775	81 (aa)	-	A0A2R9CLA8

Gene Model

Click here to download ENSPPAG00000043941's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000043941's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000043941	-	93	86.667	ENSPPAG00000032431	LSM2	79	86.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000043941	-	93	86.667	ENSG00000204392	LSM2	79	86.667	Homo_sapiens
ENSPPAG00000043941	-	93	85.333	ENSAPOG00000017967	si:ch73-14h10.2	79	85.333	Acanthochromis_polyacanthus
ENSPPAG00000043941	-	93	86.667	ENSAMEG00000006483	LSM2	80	86.667	Ailuropoda_melanoleuca
ENSPPAG00000043941	-	93	85.333	ENSACIG00000007795	si:ch73-14h10.2	50	85.333	Amphilophus_citrinellus
ENSPPAG00000043941	-	93	85.333	ENSAOCG00000006949	si:ch73-14h10.2	62	85.333	Amphiprion_ocellaris
ENSPPAG00000043941	-	93	85.333	ENSAPEG00000020375	si:ch73-14h10.2	69	85.333	Amphiprion_percula
ENSPPAG00000043941	-	93	85.333	ENSATEG00000011376	si:ch73-14h10.2	79	85.333	Anabas_testudineus
ENSPPAG00000043941	-	93	86.667	ENSACAG00000017281	LSM2	72	86.667	Anolis_carolinensis
ENSPPAG00000043941	-	93	86.667	ENSANAG00000028372	LSM2	95	85.915	Aotus_nancymaae
ENSPPAG00000043941	-	96	82.051	ENSANAG00000028033	-	84	82.051	Aotus_nancymaae
ENSPPAG00000043941	-	93	85.333	ENSACLG00000024717	smx5	79	85.333	Astatotilapia_calliptera
ENSPPAG00000043941	-	93	85.333	ENSAMXG00000036868	si:ch73-14h10.2	79	85.333	Astyanax_mexicanus
ENSPPAG00000043941	-	93	86.667	ENSBTAG00000005634	LSM2	79	86.667	Bos_taurus
ENSPPAG00000043941	-	91	71.622	WBGene00001808	gut-2	76	71.622	Caenorhabditis_elegans
ENSPPAG00000043941	-	93	86.667	ENSCJAG00000040899	LSM2	79	86.667	Callithrix_jacchus
ENSPPAG00000043941	-	88	84.507	ENSCAFG00020016978	-	88	84.507	Canis_lupus_dingo
ENSPPAG00000043941	-	93	86.667	ENSCHIG00000016153	LSM2	80	86.667	Capra_hircus
ENSPPAG00000043941	-	93	86.667	ENSTSYG00000034844	LSM2	79	86.667	Carlito_syrichta
ENSPPAG00000043941	-	93	81.333	ENSTSYG00000030015	-	91	83.562	Carlito_syrichta
ENSPPAG00000043941	-	89	86.111	ENSCAPG00000009970	LSM2	92	86.111	Cavia_aperea
ENSPPAG00000043941	-	93	86.667	ENSCPOG00000021053	LSM2	79	86.667	Cavia_porcellus
ENSPPAG00000043941	-	93	86.667	ENSCCAG00000024276	LSM2	79	86.667	Cebus_capucinus
ENSPPAG00000043941	-	93	86.667	ENSCATG00000013737	LSM2	79	86.667	Cercocebus_atys
ENSPPAG00000043941	-	93	86.667	ENSCLAG00000008081	LSM2	79	86.667	Chinchilla_lanigera
ENSPPAG00000043941	-	93	86.667	ENSCSAG00000008800	LSM2	79	86.667	Chlorocebus_sabaeus
ENSPPAG00000043941	-	93	86.667	ENSCHOG00000007702	LSM2	79	86.667	Choloepus_hoffmanni
ENSPPAG00000043941	-	93	81.333	ENSCING00000022677	-	79	81.333	Ciona_intestinalis
ENSPPAG00000043941	-	93	86.667	ENSCANG00000039576	LSM2	79	86.667	Colobus_angolensis_palliatus
ENSPPAG00000043941	-	93	86.667	ENSCGRG00001013932	Lsm2	79	86.667	Cricetulus_griseus_chok1gshd
ENSPPAG00000043941	-	89	86.111	ENSCGRG00000013311	Lsm2	62	86.111	Cricetulus_griseus_crigri
ENSPPAG00000043941	-	93	85.333	ENSCSEG00000002911	si:ch73-14h10.2	79	85.333	Cynoglossus_semilaevis
ENSPPAG00000043941	-	93	85.333	ENSCVAG00000015394	si:ch73-14h10.2	71	85.333	Cyprinodon_variegatus
ENSPPAG00000043941	-	93	85.333	ENSDARG00000070867	smx5	79	85.333	Danio_rerio
ENSPPAG00000043941	-	93	86.667	ENSDNOG00000002633	LSM2	80	86.667	Dasypus_novemcinctus
ENSPPAG00000043941	-	93	86.667	ENSDORG00000026571	Lsm2	79	86.667	Dipodomys_ordii
ENSPPAG00000043941	-	93	80.000	FBgn0036277	CG10418	79	80.000	Drosophila_melanogaster
ENSPPAG00000043941	-	93	86.667	ENSEASG00005015670	LSM2	63	86.667	Equus_asinus_asinus
ENSPPAG00000043941	-	93	86.667	ENSECAG00000018791	LSM2	63	86.667	Equus_caballus
ENSPPAG00000043941	-	93	86.667	ENSELUG00000008241	smx5	79	86.667	Esox_lucius
ENSPPAG00000043941	-	93	86.667	ENSFCAG00000045887	LSM2	79	86.667	Felis_catus
ENSPPAG00000043941	-	93	86.667	ENSFDAG00000000390	LSM2	79	86.667	Fukomys_damarensis
ENSPPAG00000043941	-	93	81.818	ENSFHEG00000009619	si:ch73-14h10.2	80	81.818	Fundulus_heteroclitus
ENSPPAG00000043941	-	93	85.333	ENSGMOG00000019208	si:ch73-14h10.2	80	85.333	Gadus_morhua
ENSPPAG00000043941	-	93	85.333	ENSGAFG00000017286	si:ch73-14h10.2	79	85.333	Gambusia_affinis
ENSPPAG00000043941	-	93	85.333	ENSGACG00000003827	si:ch73-14h10.2	79	85.333	Gasterosteus_aculeatus
ENSPPAG00000043941	-	93	86.667	ENSGAGG00000012458	LSM2	79	86.667	Gopherus_agassizii
ENSPPAG00000043941	-	93	86.667	ENSGGOG00000011383	LSM2	79	86.667	Gorilla_gorilla
ENSPPAG00000043941	-	93	86.667	ENSHGLG00000011299	LSM2	79	86.667	Heterocephalus_glaber_female
ENSPPAG00000043941	-	93	86.667	ENSHGLG00100017194	LSM2	79	86.667	Heterocephalus_glaber_male
ENSPPAG00000043941	-	93	85.333	ENSHCOG00000014057	si:ch73-14h10.2	79	85.333	Hippocampus_comes
ENSPPAG00000043941	-	93	85.333	ENSIPUG00000010539	lsm2	79	85.333	Ictalurus_punctatus
ENSPPAG00000043941	-	93	86.667	ENSSTOG00000013144	LSM2	79	86.667	Ictidomys_tridecemlineatus
ENSPPAG00000043941	-	93	62.667	ENSJJAG00000019477	-	80	62.667	Jaculus_jaculus
ENSPPAG00000043941	-	93	85.333	ENSKMAG00000014909	si:ch73-14h10.2	79	85.333	Kryptolebias_marmoratus
ENSPPAG00000043941	-	93	84.000	ENSLBEG00000025781	si:ch73-14h10.2	78	84.000	Labrus_bergylta
ENSPPAG00000043941	-	93	85.333	ENSLACG00000015064	LSM2	79	85.333	Latimeria_chalumnae
ENSPPAG00000043941	-	93	85.333	ENSLOCG00000005228	si:ch73-14h10.2	79	85.333	Lepisosteus_oculatus
ENSPPAG00000043941	-	93	86.667	ENSLAFG00000016139	LSM2	80	86.667	Loxodonta_africana
ENSPPAG00000043941	-	93	86.667	ENSMFAG00000001016	LSM2	79	86.667	Macaca_fascicularis
ENSPPAG00000043941	-	93	88.000	ENSMMUG00000045473	-	82	88.000	Macaca_mulatta
ENSPPAG00000043941	-	93	86.667	ENSMMUG00000006832	LSM2	79	86.667	Macaca_mulatta
ENSPPAG00000043941	-	93	86.667	ENSMNEG00000045355	LSM2	79	86.667	Macaca_nemestrina
ENSPPAG00000043941	-	93	88.000	ENSMNEG00000040973	-	91	88.000	Macaca_nemestrina
ENSPPAG00000043941	-	93	86.667	ENSMLEG00000037369	-	79	86.667	Mandrillus_leucophaeus
ENSPPAG00000043941	-	93	86.667	ENSMLEG00000031181	-	91	86.667	Mandrillus_leucophaeus
ENSPPAG00000043941	-	93	85.333	ENSMAMG00000010053	si:ch73-14h10.2	58	85.333	Mastacembelus_armatus
ENSPPAG00000043941	-	93	83.117	ENSMZEG00005008688	si:ch73-14h10.2	80	83.117	Maylandia_zebra
ENSPPAG00000043941	-	93	86.667	ENSMAUG00000021966	Lsm2	79	86.667	Mesocricetus_auratus
ENSPPAG00000043941	-	89	69.444	ENSMICG00000046764	-	92	69.444	Microcebus_murinus
ENSPPAG00000043941	-	93	86.667	ENSMOCG00000015306	Lsm2	79	86.667	Microtus_ochrogaster
ENSPPAG00000043941	-	93	84.000	ENSMMOG00000005603	si:ch73-14h10.2	80	84.000	Mola_mola
ENSPPAG00000043941	-	93	85.333	ENSMODG00000015177	LSM2	79	85.333	Monodelphis_domestica
ENSPPAG00000043941	-	93	85.333	ENSMALG00000016490	si:ch73-14h10.2	79	85.333	Monopterus_albus
ENSPPAG00000043941	-	93	86.667	MGP_CAROLIEiJ_G0021490	Lsm2	79	86.667	Mus_caroli
ENSPPAG00000043941	-	93	86.667	ENSMUSG00000007050	Lsm2	79	86.667	Mus_musculus
ENSPPAG00000043941	-	93	86.667	MGP_PahariEiJ_G0020485	Lsm2	79	86.667	Mus_pahari
ENSPPAG00000043941	-	93	86.667	MGP_SPRETEiJ_G0022395	Lsm2	79	86.667	Mus_spretus
ENSPPAG00000043941	-	93	86.667	ENSNGAG00000003997	Lsm2	79	86.667	Nannospalax_galili
ENSPPAG00000043941	-	93	85.333	ENSNBRG00000012904	si:ch73-14h10.2	86	85.333	Neolamprologus_brichardi
ENSPPAG00000043941	-	93	86.667	ENSNLEG00000035542	LSM2	79	86.667	Nomascus_leucogenys
ENSPPAG00000043941	-	88	84.507	ENSMEUG00000003419	LSM2	100	84.507	Notamacropus_eugenii
ENSPPAG00000043941	-	93	86.667	ENSOPRG00000003668	LSM2	79	86.667	Ochotona_princeps
ENSPPAG00000043941	-	93	86.667	ENSODEG00000017583	LSM2	79	86.667	Octodon_degus
ENSPPAG00000043941	-	93	85.333	ENSONIG00000019321	si:ch73-14h10.2	79	85.333	Oreochromis_niloticus
ENSPPAG00000043941	-	93	86.667	ENSOANG00000005398	LSM2	80	86.667	Ornithorhynchus_anatinus
ENSPPAG00000043941	-	93	86.667	ENSOCUG00000002583	LSM2	79	86.667	Oryctolagus_cuniculus
ENSPPAG00000043941	-	93	85.333	ENSORLG00000029858	si:ch73-14h10.2	79	85.333	Oryzias_latipes
ENSPPAG00000043941	-	93	61.538	ENSORLG00015000465	si:ch73-14h10.2	84	61.538	Oryzias_latipes_hsok
ENSPPAG00000043941	-	93	85.333	ENSOMEG00000002892	si:ch73-14h10.2	79	85.333	Oryzias_melastigma
ENSPPAG00000043941	-	93	86.667	ENSOARG00000004575	LSM2	80	86.667	Ovis_aries
ENSPPAG00000043941	-	93	86.667	ENSPPRG00000015353	LSM2	79	86.667	Panthera_pardus
ENSPPAG00000043941	-	93	86.667	ENSPTIG00000010303	LSM2	79	86.667	Panthera_tigris_altaica
ENSPPAG00000043941	-	93	86.667	ENSPTRG00000017986	LSM2	79	86.667	Pan_troglodytes
ENSPPAG00000043941	-	93	86.667	ENSPANG00000024577	LSM2	79	86.667	Papio_anubis
ENSPPAG00000043941	-	93	85.333	ENSPKIG00000007028	si:ch73-14h10.2	79	85.333	Paramormyrops_kingsleyae
ENSPPAG00000043941	-	93	86.667	ENSPSIG00000004458	LSM2	63	86.667	Pelodiscus_sinensis
ENSPPAG00000043941	-	93	82.667	ENSPMGG00000018511	si:ch73-14h10.2	80	82.667	Periophthalmus_magnuspinnatus
ENSPPAG00000043941	-	93	85.333	ENSPCIG00000018560	-	76	85.333	Phascolarctos_cinereus
ENSPPAG00000043941	-	93	85.333	ENSPFOG00000001621	si:ch73-14h10.2	79	85.333	Poecilia_formosa
ENSPPAG00000043941	-	93	85.333	ENSPLAG00000017165	si:ch73-14h10.2	79	85.333	Poecilia_latipinna
ENSPPAG00000043941	-	93	85.333	ENSPMEG00000019574	si:ch73-14h10.2	79	85.333	Poecilia_mexicana
ENSPPAG00000043941	-	93	84.000	ENSPREG00000016534	si:ch73-14h10.2	80	84.000	Poecilia_reticulata
ENSPPAG00000043941	-	93	86.667	ENSPCAG00000013737	LSM2	79	86.667	Procavia_capensis
ENSPPAG00000043941	-	93	86.667	ENSPCOG00000020134	LSM2	79	86.667	Propithecus_coquereli
ENSPPAG00000043941	-	93	86.667	ENSPVAG00000012405	LSM2	79	86.667	Pteropus_vampyrus
ENSPPAG00000043941	-	93	85.333	ENSPNYG00000019298	smx5	79	85.333	Pundamilia_nyererei
ENSPPAG00000043941	-	93	85.333	ENSPNAG00000027769	si:ch73-14h10.2	79	85.333	Pygocentrus_nattereri
ENSPPAG00000043941	-	93	86.667	ENSRNOG00000048725	Lsm2	79	86.667	Rattus_norvegicus
ENSPPAG00000043941	-	93	89.333	ENSRBIG00000011356	-	91	89.333	Rhinopithecus_bieti
ENSPPAG00000043941	-	93	86.667	ENSRBIG00000010172	LSM2	79	86.667	Rhinopithecus_bieti
ENSPPAG00000043941	-	93	86.667	ENSRROG00000030345	LSM2	79	86.667	Rhinopithecus_roxellana
ENSPPAG00000043941	-	93	89.333	ENSRROG00000030708	-	91	89.333	Rhinopithecus_roxellana
ENSPPAG00000043941	-	93	52.000	YBL026W	LSM2	79	52.000	Saccharomyces_cerevisiae
ENSPPAG00000043941	-	93	86.667	ENSSBOG00000018943	LSM2	97	81.013	Saimiri_boliviensis_boliviensis
ENSPPAG00000043941	-	93	85.333	ENSSFOG00015006734	lsm2	79	85.333	Scleropages_formosus
ENSPPAG00000043941	-	93	85.333	ENSSMAG00000001122	si:ch73-14h10.2	79	85.333	Scophthalmus_maximus
ENSPPAG00000043941	-	93	85.333	ENSSDUG00000021605	smx5	79	85.333	Seriola_dumerili
ENSPPAG00000043941	-	93	85.333	ENSSLDG00000002765	si:ch73-14h10.2	79	85.333	Seriola_lalandi_dorsalis
ENSPPAG00000043941	-	93	85.333	ENSSPUG00000009631	LSM2	79	85.333	Sphenodon_punctatus
ENSPPAG00000043941	-	93	85.333	ENSSPAG00000016904	si:ch73-14h10.2	79	85.333	Stegastes_partitus
ENSPPAG00000043941	-	93	86.667	ENSSSCG00000039021	LSM2	79	86.667	Sus_scrofa
ENSPPAG00000043941	-	93	84.000	ENSTRUG00000002093	si:ch73-14h10.2	80	84.000	Takifugu_rubripes
ENSPPAG00000043941	-	58	85.106	ENSTNIG00000013770	si:ch73-14h10.2	70	85.106	Tetraodon_nigroviridis
ENSPPAG00000043941	-	93	86.667	ENSTTRG00000014131	LSM2	79	86.667	Tursiops_truncatus
ENSPPAG00000043941	-	93	86.667	ENSUMAG00000013425	LSM2	52	86.667	Ursus_maritimus
ENSPPAG00000043941	-	93	86.667	ENSVPAG00000001761	LSM2	80	86.667	Vicugna_pacos
ENSPPAG00000043941	-	98	82.278	ENSVVUG00000016264	-	98	82.278	Vulpes_vulpes
ENSPPAG00000043941	-	93	85.333	ENSXETG00000024077	lsm2	79	85.333	Xenopus_tropicalis
ENSPPAG00000043941	-	93	84.000	ENSXCOG00000006078	si:ch73-14h10.2	80	84.000	Xiphophorus_couchianus
ENSPPAG00000043941	-	93	84.000	ENSXMAG00000028018	si:ch73-14h10.2	80	84.000	Xiphophorus_maculatus