EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPRG00000000350 (Gene tree)
Gene ID: 109271923
Gene Symbol: RTCA
Alias: -
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Plus strand
Length: 23355 bases
Position: chrKV860303.1:6561284-6584638
Accession: 109271923
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000004138	RTC	PF01137.21	3.8e-87	1	1
ENSPPRP00000004134	RTC	PF01137.21	1.5e-81	1	1
ENSPPRP00000004134	RTC_insert	PF05189.13	3.5e-25	1	1
ENSPPRP00000004138	RTC_insert	PF05189.13	4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000001748	RTCA-202	1603	XM_019457626	ENSPPRP00000004138	366 (aa)	XP_019313171	UPI0009055315
ENSPPRT00000001738	RTCA-201	1137	-	ENSPPRP00000004134	378 (aa)	-	-

Gene Model

Click here to download ENSPPRG00000000350's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000000350's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000000350	RTCA	100	95.082	ENSG00000137996	RTCA	100	95.918	Homo_sapiens
ENSPPRG00000000350	RTCA	99	72.299	ENSAPOG00000001345	rtca	98	72.299	Acanthochromis_polyacanthus
ENSPPRG00000000350	RTCA	73	97.398	ENSAMEG00000008855	RTCA	100	97.398	Ailuropoda_melanoleuca
ENSPPRG00000000350	RTCA	99	72.376	ENSACIG00000019643	rtca	99	72.376	Amphilophus_citrinellus
ENSPPRG00000000350	RTCA	100	71.585	ENSAOCG00000014979	rtca	99	71.585	Amphiprion_ocellaris
ENSPPRG00000000350	RTCA	100	71.585	ENSAPEG00000006945	rtca	99	71.585	Amphiprion_percula
ENSPPRG00000000350	RTCA	100	70.219	ENSATEG00000006315	rtca	100	70.219	Anabas_testudineus
ENSPPRG00000000350	RTCA	96	80.226	ENSAPLG00000015430	RTCA	100	80.226	Anas_platyrhynchos
ENSPPRG00000000350	RTCA	100	94.536	ENSANAG00000025446	RTCA	100	94.536	Aotus_nancymaae
ENSPPRG00000000350	RTCA	100	70.765	ENSACLG00000020770	rtca	99	70.765	Astatotilapia_calliptera
ENSPPRG00000000350	RTCA	100	73.497	ENSAMXG00000043271	rtca	100	73.497	Astyanax_mexicanus
ENSPPRG00000000350	RTCA	100	96.721	ENSBTAG00000006321	RTCA	100	96.721	Bos_taurus
ENSPPRG00000000350	RTCA	100	94.536	ENSCJAG00000003398	RTCA	100	94.536	Callithrix_jacchus
ENSPPRG00000000350	RTCA	100	98.361	ENSCAFG00000020010	RTCA	68	98.361	Canis_familiaris
ENSPPRG00000000350	RTCA	100	98.361	ENSCAFG00020011528	RTCA	57	98.361	Canis_lupus_dingo
ENSPPRG00000000350	RTCA	100	96.448	ENSCHIG00000018937	RTCA	100	96.448	Capra_hircus
ENSPPRG00000000350	RTCA	100	94.809	ENSTSYG00000011305	RTCA	100	94.809	Carlito_syrichta
ENSPPRG00000000350	RTCA	100	94.262	ENSCCAG00000021844	RTCA	100	94.262	Cebus_capucinus
ENSPPRG00000000350	RTCA	100	92.167	ENSCATG00000019364	RTCA	100	95.146	Cercocebus_atys
ENSPPRG00000000350	RTCA	87	94.637	ENSCLAG00000006125	RTCA	100	94.637	Chinchilla_lanigera
ENSPPRG00000000350	RTCA	100	95.355	ENSCSAG00000001509	RTCA	100	95.355	Chlorocebus_sabaeus
ENSPPRG00000000350	RTCA	99	94.780	ENSCHOG00000005211	RTCA	99	94.780	Choloepus_hoffmanni
ENSPPRG00000000350	RTCA	100	83.880	ENSCPBG00000026658	RTCA	100	83.880	Chrysemys_picta_bellii
ENSPPRG00000000350	RTCA	98	56.111	ENSCING00000007875	-	98	56.111	Ciona_intestinalis
ENSPPRG00000000350	RTCA	98	54.722	ENSCSAVG00000007269	-	98	54.722	Ciona_savignyi
ENSPPRG00000000350	RTCA	100	95.082	ENSCANG00000040106	RTCA	100	95.082	Colobus_angolensis_palliatus
ENSPPRG00000000350	RTCA	73	91.822	ENSCGRG00001013163	Rtca	85	91.822	Cricetulus_griseus_chok1gshd
ENSPPRG00000000350	RTCA	98	69.722	ENSCSEG00000000530	rtca	96	69.722	Cynoglossus_semilaevis
ENSPPRG00000000350	RTCA	100	59.563	ENSCVAG00000021809	rtca	100	59.563	Cyprinodon_variegatus
ENSPPRG00000000350	RTCA	100	74.044	ENSDARG00000002215	rtca	100	74.044	Danio_rerio
ENSPPRG00000000350	RTCA	99	95.055	ENSDNOG00000000456	RTCA	99	95.055	Dasypus_novemcinctus
ENSPPRG00000000350	RTCA	100	93.716	ENSDORG00000005448	Rtca	100	93.716	Dipodomys_ordii
ENSPPRG00000000350	RTCA	99	38.398	FBgn0025630	Rtca	99	38.398	Drosophila_melanogaster
ENSPPRG00000000350	RTCA	95	55.085	ENSEBUG00000008556	rtca	97	55.085	Eptatretus_burgeri
ENSPPRG00000000350	RTCA	100	95.902	ENSEASG00005015926	RTCA	100	95.902	Equus_asinus_asinus
ENSPPRG00000000350	RTCA	100	95.902	ENSECAG00000019831	RTCA	100	95.902	Equus_caballus
ENSPPRG00000000350	RTCA	91	84.393	ENSEEUG00000001165	RTCA	100	84.393	Erinaceus_europaeus
ENSPPRG00000000350	RTCA	99	72.299	ENSELUG00000003741	rtca	99	72.299	Esox_lucius
ENSPPRG00000000350	RTCA	100	99.735	ENSFCAG00000024460	RTCA	100	99.735	Felis_catus
ENSPPRG00000000350	RTCA	93	82.059	ENSFALG00000002443	RTCA	91	82.059	Ficedula_albicollis
ENSPPRG00000000350	RTCA	98	73.481	ENSFDAG00000016084	-	100	73.481	Fukomys_damarensis
ENSPPRG00000000350	RTCA	100	95.082	ENSFDAG00000012070	-	100	95.082	Fukomys_damarensis
ENSPPRG00000000350	RTCA	55	75.000	ENSFHEG00000002868	rtca	90	72.596	Fundulus_heteroclitus
ENSPPRG00000000350	RTCA	100	69.399	ENSGMOG00000013264	rtca	100	69.399	Gadus_morhua
ENSPPRG00000000350	RTCA	100	83.060	ENSGALG00000005277	RTCA	100	83.060	Gallus_gallus
ENSPPRG00000000350	RTCA	100	71.585	ENSGAFG00000011853	rtca	99	71.585	Gambusia_affinis
ENSPPRG00000000350	RTCA	100	69.945	ENSGACG00000013497	rtca	100	69.945	Gasterosteus_aculeatus
ENSPPRG00000000350	RTCA	80	84.642	ENSGAGG00000023306	RTCA	100	84.642	Gopherus_agassizii
ENSPPRG00000000350	RTCA	100	94.262	ENSGGOG00000044018	-	100	94.262	Gorilla_gorilla
ENSPPRG00000000350	RTCA	100	95.082	ENSGGOG00000009546	-	100	95.082	Gorilla_gorilla
ENSPPRG00000000350	RTCA	100	70.572	ENSHBUG00000002114	rtca	99	70.572	Haplochromis_burtoni
ENSPPRG00000000350	RTCA	100	94.262	ENSHGLG00000002617	RTCA	100	94.262	Heterocephalus_glaber_female
ENSPPRG00000000350	RTCA	100	94.262	ENSHGLG00100006056	RTCA	100	94.262	Heterocephalus_glaber_male
ENSPPRG00000000350	RTCA	100	63.934	ENSHCOG00000020628	rtca	88	64.543	Hippocampus_comes
ENSPPRG00000000350	RTCA	100	73.770	ENSIPUG00000024803	rtca	100	73.770	Ictalurus_punctatus
ENSPPRG00000000350	RTCA	100	83.924	ENSSTOG00000033099	-	100	83.924	Ictidomys_tridecemlineatus
ENSPPRG00000000350	RTCA	100	88.251	ENSSTOG00000013528	-	100	88.251	Ictidomys_tridecemlineatus
ENSPPRG00000000350	RTCA	100	66.940	ENSJJAG00000016178	Rtca	100	66.940	Jaculus_jaculus
ENSPPRG00000000350	RTCA	99	72.022	ENSKMAG00000006651	rtca	98	72.022	Kryptolebias_marmoratus
ENSPPRG00000000350	RTCA	88	69.782	ENSLBEG00000002448	-	99	69.782	Labrus_bergylta
ENSPPRG00000000350	RTCA	99	70.083	ENSLBEG00000028971	rtca	99	70.083	Labrus_bergylta
ENSPPRG00000000350	RTCA	100	78.142	ENSLACG00000013666	RTCA	100	78.142	Latimeria_chalumnae
ENSPPRG00000000350	RTCA	100	73.224	ENSLOCG00000000093	rtca	99	73.224	Lepisosteus_oculatus
ENSPPRG00000000350	RTCA	100	94.262	ENSLAFG00000001473	RTCA	100	94.262	Loxodonta_africana
ENSPPRG00000000350	RTCA	100	95.355	ENSMFAG00000034132	RTCA	100	95.355	Macaca_fascicularis
ENSPPRG00000000350	RTCA	100	94.809	ENSMMUG00000019105	RTCA	100	94.809	Macaca_mulatta
ENSPPRG00000000350	RTCA	84	95.146	ENSMNEG00000037163	RTCA	100	95.146	Macaca_nemestrina
ENSPPRG00000000350	RTCA	100	78.689	ENSMLEG00000042151	RTCA	100	78.689	Mandrillus_leucophaeus
ENSPPRG00000000350	RTCA	100	73.770	ENSMAMG00000016536	rtca	100	73.770	Mastacembelus_armatus
ENSPPRG00000000350	RTCA	100	70.765	ENSMZEG00005017945	rtca	99	70.765	Maylandia_zebra
ENSPPRG00000000350	RTCA	87	81.505	ENSMGAG00000006892	RTCA	99	81.505	Meleagris_gallopavo
ENSPPRG00000000350	RTCA	100	91.803	ENSMAUG00000008488	Rtca	100	91.803	Mesocricetus_auratus
ENSPPRG00000000350	RTCA	84	95.793	ENSMICG00000008643	RTCA	100	95.793	Microcebus_murinus
ENSPPRG00000000350	RTCA	100	92.623	ENSMOCG00000016660	Rtca	100	92.623	Microtus_ochrogaster
ENSPPRG00000000350	RTCA	84	72.168	ENSMMOG00000007750	rtca	100	72.168	Mola_mola
ENSPPRG00000000350	RTCA	100	91.803	ENSMODG00000003557	RTCA	100	91.803	Monodelphis_domestica
ENSPPRG00000000350	RTCA	100	72.951	ENSMALG00000020844	rtca	100	72.951	Monopterus_albus
ENSPPRG00000000350	RTCA	100	91.803	MGP_CAROLIEiJ_G0025565	Rtca	100	91.803	Mus_caroli
ENSPPRG00000000350	RTCA	100	91.257	ENSMUSG00000000339	Rtca	100	91.257	Mus_musculus
ENSPPRG00000000350	RTCA	100	91.530	MGP_PahariEiJ_G0027011	Rtca	100	91.530	Mus_pahari
ENSPPRG00000000350	RTCA	100	91.530	MGP_SPRETEiJ_G0026515	Rtca	100	91.530	Mus_spretus
ENSPPRG00000000350	RTCA	100	98.634	ENSMPUG00000012119	RTCA	100	98.634	Mustela_putorius_furo
ENSPPRG00000000350	RTCA	100	88.283	ENSMLUG00000009922	RTCA	100	88.283	Myotis_lucifugus
ENSPPRG00000000350	RTCA	100	92.077	ENSNGAG00000011540	Rtca	99	92.077	Nannospalax_galili
ENSPPRG00000000350	RTCA	100	70.845	ENSNBRG00000003062	rtca	99	70.845	Neolamprologus_brichardi
ENSPPRG00000000350	RTCA	100	95.082	ENSNLEG00000031426	RTCA	100	95.082	Nomascus_leucogenys
ENSPPRG00000000350	RTCA	59	96.341	ENSMEUG00000010030	-	77	78.788	Notamacropus_eugenii
ENSPPRG00000000350	RTCA	73	89.219	ENSOPRG00000012092	RTCA	71	89.219	Ochotona_princeps
ENSPPRG00000000350	RTCA	95	94.253	ENSODEG00000006990	RTCA	96	94.302	Octodon_degus
ENSPPRG00000000350	RTCA	100	70.572	ENSONIG00000007753	rtca	99	70.572	Oreochromis_niloticus
ENSPPRG00000000350	RTCA	87	88.328	ENSOANG00000012055	RTCA	99	87.850	Ornithorhynchus_anatinus
ENSPPRG00000000350	RTCA	100	96.448	ENSOCUG00000014247	RTCA	100	96.448	Oryctolagus_cuniculus
ENSPPRG00000000350	RTCA	100	71.038	ENSORLG00000013605	rtca	100	71.038	Oryzias_latipes
ENSPPRG00000000350	RTCA	100	71.038	ENSORLG00020001904	rtca	100	71.038	Oryzias_latipes_hni
ENSPPRG00000000350	RTCA	100	71.038	ENSORLG00015021064	rtca	100	71.038	Oryzias_latipes_hsok
ENSPPRG00000000350	RTCA	100	71.585	ENSOMEG00000000756	rtca	100	71.585	Oryzias_melastigma
ENSPPRG00000000350	RTCA	100	85.792	ENSOGAG00000005627	RTCA	100	85.792	Otolemur_garnettii
ENSPPRG00000000350	RTCA	87	95.597	ENSOARG00000018122	RTCA	100	95.597	Ovis_aries
ENSPPRG00000000350	RTCA	100	91.645	ENSPPAG00000035119	RTCA	100	94.822	Pan_paniscus
ENSPPRG00000000350	RTCA	100	99.471	ENSPTIG00000012816	RTCA	100	99.471	Panthera_tigris_altaica
ENSPPRG00000000350	RTCA	100	91.645	ENSPTRG00000001004	RTCA	100	94.822	Pan_troglodytes
ENSPPRG00000000350	RTCA	100	95.082	ENSPANG00000000346	RTCA	100	95.082	Papio_anubis
ENSPPRG00000000350	RTCA	100	74.863	ENSPKIG00000001653	rtca	100	74.863	Paramormyrops_kingsleyae
ENSPPRG00000000350	RTCA	100	84.153	ENSPSIG00000011408	RTCA	100	84.153	Pelodiscus_sinensis
ENSPPRG00000000350	RTCA	100	92.350	ENSPEMG00000018582	Rtca	100	92.350	Peromyscus_maniculatus_bairdii
ENSPPRG00000000350	RTCA	99	58.287	ENSPMAG00000009110	rtca	99	57.808	Petromyzon_marinus
ENSPPRG00000000350	RTCA	100	92.350	ENSPCIG00000007684	RTCA	100	92.350	Phascolarctos_cinereus
ENSPPRG00000000350	RTCA	100	71.935	ENSPFOG00000004824	rtca	100	71.935	Poecilia_formosa
ENSPPRG00000000350	RTCA	100	72.131	ENSPLAG00000011753	rtca	99	72.131	Poecilia_latipinna
ENSPPRG00000000350	RTCA	100	72.131	ENSPMEG00000020469	rtca	99	72.131	Poecilia_mexicana
ENSPPRG00000000350	RTCA	100	72.951	ENSPREG00000001365	rtca	99	72.951	Poecilia_reticulata
ENSPPRG00000000350	RTCA	100	95.082	ENSPPYG00000001115	RTCA	100	95.082	Pongo_abelii
ENSPPRG00000000350	RTCA	100	90.984	ENSPCAG00000005076	RTCA	100	90.984	Procavia_capensis
ENSPPRG00000000350	RTCA	100	96.995	ENSPCOG00000005603	RTCA	100	96.995	Propithecus_coquereli
ENSPPRG00000000350	RTCA	100	92.428	ENSPVAG00000009478	RTCA	100	92.428	Pteropus_vampyrus
ENSPPRG00000000350	RTCA	100	70.765	ENSPNYG00000004722	rtca	99	70.765	Pundamilia_nyererei
ENSPPRG00000000350	RTCA	100	73.497	ENSPNAG00000022270	rtca	100	73.497	Pygocentrus_nattereri
ENSPPRG00000000350	RTCA	100	92.077	ENSRNOG00000014575	Rtca	100	92.077	Rattus_norvegicus
ENSPPRG00000000350	RTCA	100	91.384	ENSRBIG00000041180	RTCA	100	94.175	Rhinopithecus_bieti
ENSPPRG00000000350	RTCA	100	94.536	ENSRROG00000024929	RTCA	100	94.536	Rhinopithecus_roxellana
ENSPPRG00000000350	RTCA	100	93.716	ENSSBOG00000028626	RTCA	100	93.716	Saimiri_boliviensis_boliviensis
ENSPPRG00000000350	RTCA	100	92.350	ENSSHAG00000001758	RTCA	100	92.350	Sarcophilus_harrisii
ENSPPRG00000000350	RTCA	98	69.722	ENSSMAG00000014680	rtca	97	69.722	Scophthalmus_maximus
ENSPPRG00000000350	RTCA	98	72.222	ENSSDUG00000015585	rtca	97	72.222	Seriola_dumerili
ENSPPRG00000000350	RTCA	96	72.650	ENSSLDG00000018985	rtca	95	72.650	Seriola_lalandi_dorsalis
ENSPPRG00000000350	RTCA	87	86.120	ENSSARG00000013993	RTCA	100	86.120	Sorex_araneus
ENSPPRG00000000350	RTCA	100	70.765	ENSSPAG00000011938	rtca	99	70.765	Stegastes_partitus
ENSPPRG00000000350	RTCA	100	96.721	ENSSSCG00000006865	RTCA	100	96.721	Sus_scrofa
ENSPPRG00000000350	RTCA	100	83.060	ENSTGUG00000005154	RTCA	100	83.060	Taeniopygia_guttata
ENSPPRG00000000350	RTCA	100	71.038	ENSTRUG00000008799	rtca	100	71.038	Takifugu_rubripes
ENSPPRG00000000350	RTCA	100	72.404	ENSTNIG00000004725	rtca	100	72.404	Tetraodon_nigroviridis
ENSPPRG00000000350	RTCA	60	85.088	ENSTBEG00000000943	RTCA	82	66.387	Tupaia_belangeri
ENSPPRG00000000350	RTCA	100	92.950	ENSTTRG00000015327	RTCA	100	92.950	Tursiops_truncatus
ENSPPRG00000000350	RTCA	94	95.335	ENSUAMG00000017265	RTCA	96	95.335	Ursus_americanus
ENSPPRG00000000350	RTCA	100	97.541	ENSUMAG00000007881	RTCA	100	97.541	Ursus_maritimus
ENSPPRG00000000350	RTCA	87	86.435	ENSVPAG00000001039	RTCA	84	86.435	Vicugna_pacos
ENSPPRG00000000350	RTCA	100	98.087	ENSVVUG00000022041	RTCA	68	98.087	Vulpes_vulpes
ENSPPRG00000000350	RTCA	99	65.479	ENSXETG00000031661	RTCA	99	65.479	Xenopus_tropicalis
ENSPPRG00000000350	RTCA	100	62.568	ENSXCOG00000008002	rtca	100	62.568	Xiphophorus_couchianus
ENSPPRG00000000350	RTCA	100	71.858	ENSXMAG00000005482	rtca	99	71.858	Xiphophorus_maculatus