EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPRG00000000413 (Gene tree)
Gene ID: 109246148
Gene Symbol: FUBP1
Alias: -
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Minus strand
Length: 28857 bases
Position: chrKV860334.1:659513-688369
Accession: 109246148
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000004218	KH_1	PF00013.29	1.6e-69	1	4
ENSPPRP00000004218	KH_1	PF00013.29	1.6e-69	2	4
ENSPPRP00000004218	KH_1	PF00013.29	1.6e-69	3	4
ENSPPRP00000004218	KH_1	PF00013.29	1.6e-69	4	4
ENSPPRP00000004204	KH_1	PF00013.29	1.8e-69	1	4
ENSPPRP00000004204	KH_1	PF00013.29	1.8e-69	2	4
ENSPPRP00000004204	KH_1	PF00013.29	1.8e-69	3	4
ENSPPRP00000004204	KH_1	PF00013.29	1.8e-69	4	4
ENSPPRP00000004218	KH_2	PF07650.17	1.8e-22	1	2
ENSPPRP00000004218	KH_2	PF07650.17	1.8e-22	2	2
ENSPPRP00000004204	KH_2	PF07650.17	1.9e-22	1	2
ENSPPRP00000004204	KH_2	PF07650.17	1.9e-22	2	2
ENSPPRP00000004218	DUF1897	PF09005.10	1e-11	1	2
ENSPPRP00000004218	DUF1897	PF09005.10	1e-11	2	2
ENSPPRP00000004204	DUF1897	PF09005.10	1.1e-11	1	2
ENSPPRP00000004204	DUF1897	PF09005.10	1.1e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000001818	FUBP1-201	2174	XM_019413884	ENSPPRP00000004204	655 (aa)	XP_019269429	UPI00005A1210
ENSPPRT00000001837	FUBP1-202	1935	XM_019413895	ENSPPRP00000004218	644 (aa)	XP_019269440	UPI000265579F

Gene Model

Click here to download ENSPPRG00000000413's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000000413's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPRG00000000413	FUBP1	53	30.769	ENSPPRG00000005941	NOVA2	50	36.765
ENSPPRG00000000413	FUBP1	91	58.306	ENSPPRG00000008001	KHSRP	57	63.007
ENSPPRG00000000413	FUBP1	59	34.524	ENSPPRG00000006165	PCBP4	73	35.366
ENSPPRG00000000413	FUBP1	50	31.609	ENSPPRG00000015429	NOVA1	51	36.364
ENSPPRG00000000413	FUBP1	60	40.625	ENSPPRG00000003933	PCBP3	81	30.973

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000000413	FUBP1	100	99.847	ENSG00000162613	FUBP1	100	99.847	Homo_sapiens
ENSPPRG00000000413	FUBP1	99	70.615	ENSAPOG00000014845	fubp1	70	75.652	Acanthochromis_polyacanthus
ENSPPRG00000000413	FUBP1	100	96.552	ENSAMEG00000007372	FUBP1	100	96.552	Ailuropoda_melanoleuca
ENSPPRG00000000413	FUBP1	100	69.479	ENSACIG00000020024	fubp1	69	73.904	Amphilophus_citrinellus
ENSPPRG00000000413	FUBP1	100	68.308	ENSAPEG00000012232	fubp1	72	77.074	Amphiprion_percula
ENSPPRG00000000413	FUBP1	99	72.516	ENSATEG00000018619	fubp1	70	77.753	Anabas_testudineus
ENSPPRG00000000413	FUBP1	93	97.347	ENSAPLG00000005965	FUBP1	100	97.347	Anas_platyrhynchos
ENSPPRG00000000413	FUBP1	99	86.111	ENSACAG00000006310	FUBP1	96	87.135	Anolis_carolinensis
ENSPPRG00000000413	FUBP1	99	71.319	ENSACLG00000006708	fubp1	72	77.974	Astatotilapia_calliptera
ENSPPRG00000000413	FUBP1	88	77.612	ENSAMXG00000005525	fubp1	64	86.337	Astyanax_mexicanus
ENSPPRG00000000413	FUBP1	100	99.845	ENSCJAG00000007062	FUBP1	100	99.845	Callithrix_jacchus
ENSPPRG00000000413	FUBP1	100	100.000	ENSCAFG00000020361	FUBP1	100	100.000	Canis_familiaris
ENSPPRG00000000413	FUBP1	94	99.350	ENSTSYG00000000148	FUBP1	100	99.350	Carlito_syrichta
ENSPPRG00000000413	FUBP1	58	98.535	ENSCAPG00000011052	-	67	98.535	Cavia_aperea
ENSPPRG00000000413	FUBP1	100	98.784	ENSCPOG00000002757	FUBP1	100	98.784	Cavia_porcellus
ENSPPRG00000000413	FUBP1	100	84.682	ENSCCAG00000036537	FUBP1	100	84.971	Cebus_capucinus
ENSPPRG00000000413	FUBP1	100	99.845	ENSCATG00000042126	FUBP1	100	99.845	Cercocebus_atys
ENSPPRG00000000413	FUBP1	100	99.542	ENSCLAG00000005621	FUBP1	100	100.000	Chinchilla_lanigera
ENSPPRG00000000413	FUBP1	100	99.845	ENSCSAG00000001402	FUBP1	100	99.845	Chlorocebus_sabaeus
ENSPPRG00000000413	FUBP1	100	99.389	ENSCHOG00000008177	FUBP1	100	99.389	Choloepus_hoffmanni
ENSPPRG00000000413	FUBP1	100	98.328	ENSCGRG00001007103	Fubp1	100	98.328	Cricetulus_griseus_chok1gshd
ENSPPRG00000000413	FUBP1	94	99.029	ENSCGRG00000003372	Fubp1	100	99.029	Cricetulus_griseus_crigri
ENSPPRG00000000413	FUBP1	100	70.814	ENSCSEG00000021412	fubp1	70	76.316	Cynoglossus_semilaevis
ENSPPRG00000000413	FUBP1	99	69.083	ENSCVAG00000014487	fubp1	60	84.986	Cyprinodon_variegatus
ENSPPRG00000000413	FUBP1	100	69.611	ENSDARG00000029248	fubp1	70	76.774	Danio_rerio
ENSPPRG00000000413	FUBP1	68	73.077	ENSDNOG00000034565	-	83	74.699	Dasypus_novemcinctus
ENSPPRG00000000413	FUBP1	100	99.542	ENSDORG00000016534	Fubp1	100	99.542	Dipodomys_ordii
ENSPPRG00000000413	FUBP1	77	97.983	ENSETEG00000000948	-	62	97.983	Echinops_telfairi
ENSPPRG00000000413	FUBP1	86	46.274	ENSEBUG00000016143	fubp1	64	65.152	Eptatretus_burgeri
ENSPPRG00000000413	FUBP1	100	85.954	ENSEEUG00000001287	FUBP1	100	85.954	Erinaceus_europaeus
ENSPPRG00000000413	FUBP1	100	68.684	ENSELUG00000007990	fubp1	70	74.298	Esox_lucius
ENSPPRG00000000413	FUBP1	99	96.267	ENSFALG00000005768	FUBP1	98	95.969	Ficedula_albicollis
ENSPPRG00000000413	FUBP1	100	99.237	ENSFDAG00000014210	FUBP1	100	100.000	Fukomys_damarensis
ENSPPRG00000000413	FUBP1	100	71.385	ENSFHEG00000005230	fubp1	70	78.384	Fundulus_heteroclitus
ENSPPRG00000000413	FUBP1	100	66.513	ENSGMOG00000003370	fubp1	70	69.956	Gadus_morhua
ENSPPRG00000000413	FUBP1	100	96.594	ENSGALG00000008939	FUBP1	100	96.594	Gallus_gallus
ENSPPRG00000000413	FUBP1	100	70.060	ENSGAFG00000020972	fubp1	91	77.778	Gambusia_affinis
ENSPPRG00000000413	FUBP1	100	70.336	ENSGACG00000016563	fubp1	70	75.877	Gasterosteus_aculeatus
ENSPPRG00000000413	FUBP1	100	70.222	ENSHBUG00000009835	fubp1	85	76.923	Haplochromis_burtoni
ENSPPRG00000000413	FUBP1	100	98.936	ENSHGLG00000008415	-	100	100.000	Heterocephalus_glaber_female
ENSPPRG00000000413	FUBP1	72	91.398	ENSHGLG00000002808	-	72	91.228	Heterocephalus_glaber_female
ENSPPRG00000000413	FUBP1	100	98.936	ENSHGLG00100003417	-	100	98.936	Heterocephalus_glaber_male
ENSPPRG00000000413	FUBP1	72	92.258	ENSHGLG00100001414	-	72	91.886	Heterocephalus_glaber_male
ENSPPRG00000000413	FUBP1	100	68.405	ENSHCOG00000000910	fubp1	70	74.735	Hippocampus_comes
ENSPPRG00000000413	FUBP1	100	74.316	ENSIPUG00000009896	fubp1	70	76.840	Ictalurus_punctatus
ENSPPRG00000000413	FUBP1	100	100.000	ENSSTOG00000014312	FUBP1	100	100.000	Ictidomys_tridecemlineatus
ENSPPRG00000000413	FUBP1	100	98.300	ENSJJAG00000020069	Fubp1	100	100.000	Jaculus_jaculus
ENSPPRG00000000413	FUBP1	100	70.552	ENSKMAG00000018897	fubp1	69	76.432	Kryptolebias_marmoratus
ENSPPRG00000000413	FUBP1	100	67.365	ENSLBEG00000012700	fubp1	72	74.790	Labrus_bergylta
ENSPPRG00000000413	FUBP1	98	71.492	ENSLOCG00000003745	fubp1	92	74.180	Lepisosteus_oculatus
ENSPPRG00000000413	FUBP1	100	96.302	ENSLAFG00000003273	FUBP1	100	98.198	Loxodonta_africana
ENSPPRG00000000413	FUBP1	100	99.695	ENSMFAG00000031825	FUBP1	100	99.695	Macaca_fascicularis
ENSPPRG00000000413	FUBP1	100	99.845	ENSMMUG00000002899	FUBP1	100	99.845	Macaca_mulatta
ENSPPRG00000000413	FUBP1	100	99.845	ENSMNEG00000045212	FUBP1	100	99.845	Macaca_nemestrina
ENSPPRG00000000413	FUBP1	100	71.582	ENSMZEG00005024298	fubp1	70	78.384	Maylandia_zebra
ENSPPRG00000000413	FUBP1	94	96.865	ENSMGAG00000009424	FUBP1	100	96.865	Meleagris_gallopavo
ENSPPRG00000000413	FUBP1	100	98.936	ENSMAUG00000016428	Fubp1	100	98.936	Mesocricetus_auratus
ENSPPRG00000000413	FUBP1	100	98.784	ENSMOCG00000014751	Fubp1	100	98.784	Microtus_ochrogaster
ENSPPRG00000000413	FUBP1	89	74.047	ENSMMOG00000019463	fubp1	64	82.817	Mola_mola
ENSPPRG00000000413	FUBP1	96	90.881	ENSMODG00000020804	FUBP1	100	90.881	Monodelphis_domestica
ENSPPRG00000000413	FUBP1	100	70.687	ENSMALG00000015173	fubp1	70	76.856	Monopterus_albus
ENSPPRG00000000413	FUBP1	100	98.473	MGP_CAROLIEiJ_G0025740	Fubp1	100	98.473	Mus_caroli
ENSPPRG00000000413	FUBP1	100	98.168	ENSMUSG00000028034	Fubp1	100	98.168	Mus_musculus
ENSPPRG00000000413	FUBP1	100	98.931	MGP_PahariEiJ_G0027191	Fubp1	100	99.291	Mus_pahari
ENSPPRG00000000413	FUBP1	100	98.321	MGP_SPRETEiJ_G0026693	Fubp1	100	98.321	Mus_spretus
ENSPPRG00000000413	FUBP1	100	95.373	ENSMLUG00000014802	FUBP1	100	95.373	Myotis_lucifugus
ENSPPRG00000000413	FUBP1	100	94.985	ENSNGAG00000014302	Fubp1	98	100.000	Nannospalax_galili
ENSPPRG00000000413	FUBP1	100	69.505	ENSNBRG00000015099	fubp1	72	77.974	Neolamprologus_brichardi
ENSPPRG00000000413	FUBP1	100	95.890	ENSNLEG00000009772	FUBP1	100	95.890	Nomascus_leucogenys
ENSPPRG00000000413	FUBP1	90	100.000	ENSMEUG00000007917	-	79	100.000	Notamacropus_eugenii
ENSPPRG00000000413	FUBP1	91	99.315	ENSOPRG00000001175	FUBP1	91	99.315	Ochotona_princeps
ENSPPRG00000000413	FUBP1	99	67.134	ENSODEG00000003657	-	99	66.355	Octodon_degus
ENSPPRG00000000413	FUBP1	100	99.389	ENSODEG00000002600	-	100	100.000	Octodon_degus
ENSPPRG00000000413	FUBP1	99	70.134	ENSONIG00000018381	fubp1	69	78.384	Oreochromis_niloticus
ENSPPRG00000000413	FUBP1	89	92.739	ENSOANG00000009777	FUBP1	99	92.574	Ornithorhynchus_anatinus
ENSPPRG00000000413	FUBP1	99	69.051	ENSORLG00000003540	fubp1	71	77.753	Oryzias_latipes
ENSPPRG00000000413	FUBP1	100	68.195	ENSORLG00020005908	fubp1	70	77.093	Oryzias_latipes_hni
ENSPPRG00000000413	FUBP1	99	70.762	ENSORLG00015008779	fubp1	70	77.093	Oryzias_latipes_hsok
ENSPPRG00000000413	FUBP1	100	70.543	ENSOMEG00000021943	fubp1	70	76.211	Oryzias_melastigma
ENSPPRG00000000413	FUBP1	100	95.976	ENSOGAG00000014233	FUBP1	100	95.976	Otolemur_garnettii
ENSPPRG00000000413	FUBP1	100	96.687	ENSOARG00000013259	FUBP1	100	96.536	Ovis_aries
ENSPPRG00000000413	FUBP1	100	100.000	ENSPTIG00000019450	FUBP1	100	100.000	Panthera_tigris_altaica
ENSPPRG00000000413	FUBP1	95	96.078	ENSPSIG00000012965	FUBP1	100	96.796	Pelodiscus_sinensis
ENSPPRG00000000413	FUBP1	99	71.451	ENSPMGG00000009060	fubp1	71	76.739	Periophthalmus_magnuspinnatus
ENSPPRG00000000413	FUBP1	100	98.024	ENSPEMG00000021802	Fubp1	100	99.315	Peromyscus_maniculatus_bairdii
ENSPPRG00000000413	FUBP1	58	62.393	ENSPMAG00000001644	-	90	63.514	Petromyzon_marinus
ENSPPRG00000000413	FUBP1	100	68.203	ENSPLAG00000021170	fubp1	72	78.384	Poecilia_latipinna
ENSPPRG00000000413	FUBP1	99	72.713	ENSPMEG00000004747	fubp1	73	78.384	Poecilia_mexicana
ENSPPRG00000000413	FUBP1	99	71.450	ENSPREG00000017911	fubp1	70	78.384	Poecilia_reticulata
ENSPPRG00000000413	FUBP1	72	99.567	ENSPPYG00000001219	-	70	99.567	Pongo_abelii
ENSPPRG00000000413	FUBP1	100	99.084	ENSPCAG00000012617	FUBP1	100	99.084	Procavia_capensis
ENSPPRG00000000413	FUBP1	100	100.000	ENSPCOG00000024974	FUBP1	100	100.000	Propithecus_coquereli
ENSPPRG00000000413	FUBP1	100	95.573	ENSPVAG00000014637	FUBP1	100	95.573	Pteropus_vampyrus
ENSPPRG00000000413	FUBP1	100	71.407	ENSPNYG00000004552	fubp1	73	78.414	Pundamilia_nyererei
ENSPPRG00000000413	FUBP1	100	71.953	ENSPNAG00000016207	fubp1	87	77.223	Pygocentrus_nattereri
ENSPPRG00000000413	FUBP1	100	98.300	ENSRNOG00000043370	Fubp1	100	98.300	Rattus_norvegicus
ENSPPRG00000000413	FUBP1	100	99.845	ENSRBIG00000042950	FUBP1	100	99.845	Rhinopithecus_bieti
ENSPPRG00000000413	FUBP1	100	99.845	ENSRROG00000043534	FUBP1	100	99.845	Rhinopithecus_roxellana
ENSPPRG00000000413	FUBP1	100	100.000	ENSSBOG00000027299	FUBP1	100	100.000	Saimiri_boliviensis_boliviensis
ENSPPRG00000000413	FUBP1	94	97.858	ENSSHAG00000005367	FUBP1	100	98.553	Sarcophilus_harrisii
ENSPPRG00000000413	FUBP1	100	72.876	ENSSFOG00015010213	fubp1	70	79.167	Scleropages_formosus
ENSPPRG00000000413	FUBP1	99	69.925	ENSSDUG00000007383	fubp1	68	76.333	Seriola_dumerili
ENSPPRG00000000413	FUBP1	100	70.015	ENSSLDG00000022863	fubp1	72	76.754	Seriola_lalandi_dorsalis
ENSPPRG00000000413	FUBP1	100	97.491	ENSSARG00000011730	FUBP1	57	100.000	Sorex_araneus
ENSPPRG00000000413	FUBP1	99	88.520	ENSSPUG00000008389	FUBP1	100	85.985	Sphenodon_punctatus
ENSPPRG00000000413	FUBP1	99	72.291	ENSSPAG00000010161	fubp1	69	77.753	Stegastes_partitus
ENSPPRG00000000413	FUBP1	93	96.223	ENSTGUG00000006841	FUBP1	100	96.223	Taeniopygia_guttata
ENSPPRG00000000413	FUBP1	93	72.305	ENSTRUG00000004615	fubp1	65	77.729	Takifugu_rubripes
ENSPPRG00000000413	FUBP1	50	84.459	ENSTNIG00000019815	-	88	84.459	Tetraodon_nigroviridis
ENSPPRG00000000413	FUBP1	82	100.000	ENSTBEG00000017333	FUBP1	67	100.000	Tupaia_belangeri
ENSPPRG00000000413	FUBP1	100	99.847	ENSTTRG00000000096	FUBP1	100	99.847	Tursiops_truncatus
ENSPPRG00000000413	FUBP1	99	99.846	ENSVPAG00000004709	FUBP1	100	99.846	Vicugna_pacos
ENSPPRG00000000413	FUBP1	100	68.817	ENSXCOG00000019354	fubp1	72	76.856	Xiphophorus_couchianus
ENSPPRG00000000413	FUBP1	97	71.835	ENSXMAG00000007168	fubp1	73	78.166	Xiphophorus_maculatus