EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPRG00000000626 (Gene tree)
Gene ID: 109245919
Gene Symbol: CHD3
Alias: -
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Minus strand
Length: 31409 bases
Position: chrKV860333.1:11219379-11250787
Accession: 109245919
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000004321	ResIII	PF04851.15	1.9e-08	1	1
ENSPPRP00000004329	ResIII	PF04851.15	2e-08	1	1
ENSPPRP00000004345	ResIII	PF04851.15	2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000001962	CHD3-203	6063	XM_019413554	ENSPPRP00000004345	2020 (aa)	XP_019269099	-
ENSPPRT00000001936	CHD3-201	5892	-	ENSPPRP00000004321	1963 (aa)	-	-
ENSPPRT00000001948	CHD3-202	5994	-	ENSPPRP00000004329	1997 (aa)	-	-

Gene Model

Click here to download ENSPPRG00000000626's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000000626's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPRG00000000626	CHD3	89	71.041	ENSPPRG00000001388	-	95	70.822
ENSPPRG00000000626	CHD3	95	68.364	ENSPPRG00000009453	CHD5	98	68.330

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000000626	CHD3	100	98.172	ENSG00000170004	CHD3	99	97.850	Homo_sapiens
ENSPPRG00000000626	CHD3	84	76.509	ENSAPOG00000005614	chd3	94	80.228	Acanthochromis_polyacanthus
ENSPPRG00000000626	CHD3	68	97.287	ENSAMEG00000003025	-	100	97.287	Ailuropoda_melanoleuca
ENSPPRG00000000626	CHD3	84	76.368	ENSACIG00000019671	chd3	99	81.062	Amphilophus_citrinellus
ENSPPRG00000000626	CHD3	91	80.412	ENSAOCG00000023784	chd3	97	81.747	Amphiprion_ocellaris
ENSPPRG00000000626	CHD3	91	80.069	ENSAPEG00000006341	chd3	96	76.788	Amphiprion_percula
ENSPPRG00000000626	CHD3	91	80.969	ENSATEG00000000848	chd3	95	81.579	Anabas_testudineus
ENSPPRG00000000626	CHD3	97	85.539	ENSACAG00000004276	CHD3	95	85.137	Anolis_carolinensis
ENSPPRG00000000626	CHD3	100	94.711	ENSANAG00000034323	CHD3	99	98.348	Aotus_nancymaae
ENSPPRG00000000626	CHD3	96	74.410	ENSACLG00000009222	chd3	99	74.620	Astatotilapia_calliptera
ENSPPRG00000000626	CHD3	100	97.580	ENSBTAG00000014377	CHD3	98	97.580	Bos_taurus
ENSPPRG00000000626	CHD3	100	98.025	ENSCJAG00000014766	CHD3	99	97.649	Callithrix_jacchus
ENSPPRG00000000626	CHD3	99	98.448	ENSCAFG00000016859	CHD3	99	98.448	Canis_familiaris
ENSPPRG00000000626	CHD3	94	98.774	ENSCAFG00020007422	CHD3	100	98.908	Canis_lupus_dingo
ENSPPRG00000000626	CHD3	99	97.979	ENSCHIG00000016737	CHD3	100	97.979	Capra_hircus
ENSPPRG00000000626	CHD3	99	97.406	ENSTSYG00000035658	CHD3	99	97.406	Carlito_syrichta
ENSPPRG00000000626	CHD3	99	94.330	ENSCAPG00000014864	CHD3	99	94.330	Cavia_aperea
ENSPPRG00000000626	CHD3	99	96.839	ENSCPOG00000022653	CHD3	100	95.970	Cavia_porcellus
ENSPPRG00000000626	CHD3	100	97.926	ENSCCAG00000034792	CHD3	99	97.649	Cebus_capucinus
ENSPPRG00000000626	CHD3	100	97.877	ENSCATG00000041717	CHD3	99	97.711	Cercocebus_atys
ENSPPRG00000000626	CHD3	98	97.931	ENSCLAG00000010523	CHD3	100	97.931	Chinchilla_lanigera
ENSPPRG00000000626	CHD3	98	98.069	ENSCSAG00000011122	CHD3	99	98.069	Chlorocebus_sabaeus
ENSPPRG00000000626	CHD3	89	84.082	ENSCPBG00000011966	CHD3	99	86.834	Chrysemys_picta_bellii
ENSPPRG00000000626	CHD3	99	97.609	ENSCANG00000037641	CHD3	99	97.609	Colobus_angolensis_palliatus
ENSPPRG00000000626	CHD3	98	96.898	ENSCGRG00001011306	Chd3	100	96.898	Cricetulus_griseus_chok1gshd
ENSPPRG00000000626	CHD3	93	97.059	ENSCGRG00000007878	Chd3	99	97.059	Cricetulus_griseus_crigri
ENSPPRG00000000626	CHD3	91	79.276	ENSCSEG00000004489	chd3	99	76.222	Cynoglossus_semilaevis
ENSPPRG00000000626	CHD3	86	82.072	ENSCVAG00000007293	chd3	95	82.072	Cyprinodon_variegatus
ENSPPRG00000000626	CHD3	93	77.717	ENSDARG00000021405	chd3	99	77.042	Danio_rerio
ENSPPRG00000000626	CHD3	99	83.199	ENSDNOG00000047846	CHD3	99	83.199	Dasypus_novemcinctus
ENSPPRG00000000626	CHD3	98	97.723	ENSDORG00000010713	Chd3	100	97.723	Dipodomys_ordii
ENSPPRG00000000626	CHD3	96	91.593	ENSETEG00000017733	CHD3	100	91.593	Echinops_telfairi
ENSPPRG00000000626	CHD3	54	77.758	ENSEBUG00000008310	chd3	99	70.430	Eptatretus_burgeri
ENSPPRG00000000626	CHD3	92	98.363	ENSEASG00005019360	CHD3	100	98.363	Equus_asinus_asinus
ENSPPRG00000000626	CHD3	92	98.418	ENSECAG00000010051	CHD3	100	98.418	Equus_caballus
ENSPPRG00000000626	CHD3	91	98.305	ENSEEUG00000015205	CHD3	92	100.000	Erinaceus_europaeus
ENSPPRG00000000626	CHD3	78	89.796	ENSELUG00000019499	chd3	99	89.796	Esox_lucius
ENSPPRG00000000626	CHD3	100	99.407	ENSFCAG00000009629	CHD3	98	99.407	Felis_catus
ENSPPRG00000000626	CHD3	98	95.579	ENSFDAG00000008220	CHD3	99	95.579	Fukomys_damarensis
ENSPPRG00000000626	CHD3	89	80.406	ENSGMOG00000013599	chd3	91	81.015	Gadus_morhua
ENSPPRG00000000626	CHD3	59	75.085	ENSGAFG00000004055	chd3	99	76.667	Gambusia_affinis
ENSPPRG00000000626	CHD3	97	70.675	ENSGACG00000019275	chd3	100	70.882	Gasterosteus_aculeatus
ENSPPRG00000000626	CHD3	74	86.897	ENSGAGG00000013164	CHD3	98	87.024	Gopherus_agassizii
ENSPPRG00000000626	CHD3	99	97.750	ENSGGOG00000013496	CHD3	99	97.750	Gorilla_gorilla
ENSPPRG00000000626	CHD3	100	97.430	ENSHGLG00000012017	CHD3	99	97.814	Heterocephalus_glaber_female
ENSPPRG00000000626	CHD3	88	91.014	ENSHGLG00100013902	CHD3	99	91.014	Heterocephalus_glaber_male
ENSPPRG00000000626	CHD3	93	72.732	ENSHCOG00000010170	chd3	96	73.116	Hippocampus_comes
ENSPPRG00000000626	CHD3	90	73.815	ENSIPUG00000003271	chd3	96	80.435	Ictalurus_punctatus
ENSPPRG00000000626	CHD3	99	97.396	ENSSTOG00000025907	CHD3	100	98.034	Ictidomys_tridecemlineatus
ENSPPRG00000000626	CHD3	99	96.294	ENSJJAG00000017633	Chd3	100	97.258	Jaculus_jaculus
ENSPPRG00000000626	CHD3	87	89.573	ENSKMAG00000019292	chd3	97	75.985	Kryptolebias_marmoratus
ENSPPRG00000000626	CHD3	93	71.824	ENSLBEG00000028485	chd3	91	87.391	Labrus_bergylta
ENSPPRG00000000626	CHD3	95	75.462	ENSLACG00000008031	CHD3	98	75.636	Latimeria_chalumnae
ENSPPRG00000000626	CHD3	97	77.471	ENSLOCG00000013965	chd3	97	77.183	Lepisosteus_oculatus
ENSPPRG00000000626	CHD3	94	94.171	ENSLAFG00000000572	CHD3	100	94.171	Loxodonta_africana
ENSPPRG00000000626	CHD3	99	97.660	ENSMFAG00000020113	CHD3	99	97.660	Macaca_fascicularis
ENSPPRG00000000626	CHD3	99	95.250	ENSMMUG00000022221	CHD3	99	95.236	Macaca_mulatta
ENSPPRG00000000626	CHD3	99	97.660	ENSMNEG00000001728	CHD3	99	97.706	Macaca_nemestrina
ENSPPRG00000000626	CHD3	99	97.711	ENSMLEG00000032249	CHD3	99	97.711	Mandrillus_leucophaeus
ENSPPRG00000000626	CHD3	84	76.512	ENSMAMG00000000564	chd3	99	77.165	Mastacembelus_armatus
ENSPPRG00000000626	CHD3	98	96.589	ENSMAUG00000013873	Chd3	99	93.876	Mesocricetus_auratus
ENSPPRG00000000626	CHD3	100	97.726	ENSMICG00000008741	CHD3	98	97.726	Microcebus_murinus
ENSPPRG00000000626	CHD3	98	96.993	ENSMOCG00000004848	Chd3	100	96.993	Microtus_ochrogaster
ENSPPRG00000000626	CHD3	94	74.613	ENSMMOG00000012699	chd3	99	74.386	Mola_mola
ENSPPRG00000000626	CHD3	91	94.167	ENSMODG00000007509	CHD3	100	94.444	Monodelphis_domestica
ENSPPRG00000000626	CHD3	100	96.243	MGP_CAROLIEiJ_G0016564	Chd3	100	97.026	Mus_caroli
ENSPPRG00000000626	CHD3	99	95.823	ENSMUSG00000018474	Chd3	99	96.925	Mus_musculus
ENSPPRG00000000626	CHD3	100	96.444	MGP_PahariEiJ_G0017695	Chd3	100	97.135	Mus_pahari
ENSPPRG00000000626	CHD3	99	95.773	MGP_SPRETEiJ_G0017400	Chd3	100	96.872	Mus_spretus
ENSPPRG00000000626	CHD3	86	98.541	ENSMPUG00000008861	CHD3	100	98.541	Mustela_putorius_furo
ENSPPRG00000000626	CHD3	99	96.404	ENSMLUG00000014643	-	99	96.404	Myotis_lucifugus
ENSPPRG00000000626	CHD3	98	97.154	ENSNGAG00000000773	Chd3	98	97.154	Nannospalax_galili
ENSPPRG00000000626	CHD3	85	76.148	ENSNBRG00000000636	chd3	98	76.140	Neolamprologus_brichardi
ENSPPRG00000000626	CHD3	99	94.052	ENSNLEG00000009770	CHD3	100	95.174	Nomascus_leucogenys
ENSPPRG00000000626	CHD3	86	90.382	ENSMEUG00000005852	CHD3	87	91.209	Notamacropus_eugenii
ENSPPRG00000000626	CHD3	94	96.368	ENSOPRG00000011069	CHD3	100	96.368	Ochotona_princeps
ENSPPRG00000000626	CHD3	99	97.123	ENSODEG00000017785	CHD3	99	97.509	Octodon_degus
ENSPPRG00000000626	CHD3	95	74.393	ENSONIG00000009292	chd3	100	75.052	Oreochromis_niloticus
ENSPPRG00000000626	CHD3	98	93.133	ENSOCUG00000029299	CHD3	100	92.984	Oryctolagus_cuniculus
ENSPPRG00000000626	CHD3	81	71.736	ENSORLG00000007107	chd3	93	71.983	Oryzias_latipes
ENSPPRG00000000626	CHD3	57	73.169	ENSORLG00020008387	chd3	95	73.786	Oryzias_latipes_hni
ENSPPRG00000000626	CHD3	71	80.571	ENSOMEG00000013691	chd3	99	78.866	Oryzias_melastigma
ENSPPRG00000000626	CHD3	98	97.917	ENSOGAG00000003216	CHD3	99	97.917	Otolemur_garnettii
ENSPPRG00000000626	CHD3	100	95.357	ENSOARG00000017855	CHD3	100	95.357	Ovis_aries
ENSPPRG00000000626	CHD3	99	95.515	ENSPPAG00000032886	CHD3	99	95.515	Pan_paniscus
ENSPPRG00000000626	CHD3	100	98.221	ENSPTRG00000008714	CHD3	99	97.900	Pan_troglodytes
ENSPPRG00000000626	CHD3	99	97.650	ENSPANG00000023938	CHD3	99	97.650	Papio_anubis
ENSPPRG00000000626	CHD3	93	80.079	ENSPKIG00000006305	chd3	99	80.079	Paramormyrops_kingsleyae
ENSPPRG00000000626	CHD3	55	90.420	ENSPSIG00000010177	CHD3	98	90.693	Pelodiscus_sinensis
ENSPPRG00000000626	CHD3	99	96.167	ENSPEMG00000014262	Chd3	100	96.167	Peromyscus_maniculatus_bairdii
ENSPPRG00000000626	CHD3	98	93.628	ENSPCIG00000005442	CHD3	99	94.039	Phascolarctos_cinereus
ENSPPRG00000000626	CHD3	94	76.928	ENSPFOG00000012464	chd3	91	76.982	Poecilia_formosa
ENSPPRG00000000626	CHD3	86	82.996	ENSPLAG00000002887	chd3	96	82.996	Poecilia_latipinna
ENSPPRG00000000626	CHD3	53	81.607	ENSPMEG00000016725	chd3	94	73.333	Poecilia_mexicana
ENSPPRG00000000626	CHD3	89	83.764	ENSPREG00000011044	chd3	99	78.424	Poecilia_reticulata
ENSPPRG00000000626	CHD3	99	93.100	ENSPPYG00000007940	CHD3	98	95.389	Pongo_abelii
ENSPPRG00000000626	CHD3	95	97.649	ENSPCAG00000004350	CHD3	96	97.649	Procavia_capensis
ENSPPRG00000000626	CHD3	100	97.726	ENSPCOG00000020952	CHD3	99	97.967	Propithecus_coquereli
ENSPPRG00000000626	CHD3	85	97.412	ENSPVAG00000016344	CHD3	87	97.412	Pteropus_vampyrus
ENSPPRG00000000626	CHD3	94	78.520	ENSPNAG00000020393	chd3	98	80.042	Pygocentrus_nattereri
ENSPPRG00000000626	CHD3	92	96.351	ENSRNOG00000009722	Chd3	100	96.351	Rattus_norvegicus
ENSPPRG00000000626	CHD3	99	94.617	ENSRBIG00000033562	CHD3	99	94.720	Rhinopithecus_bieti
ENSPPRG00000000626	CHD3	99	97.711	ENSRROG00000029554	CHD3	99	97.711	Rhinopithecus_roxellana
ENSPPRG00000000626	CHD3	99	97.699	ENSSBOG00000020719	CHD3	99	97.925	Saimiri_boliviensis_boliviensis
ENSPPRG00000000626	CHD3	98	94.444	ENSSHAG00000014412	CHD3	100	94.704	Sarcophilus_harrisii
ENSPPRG00000000626	CHD3	86	81.200	ENSSFOG00015023123	chd3	98	75.928	Scleropages_formosus
ENSPPRG00000000626	CHD3	78	90.741	ENSSMAG00000006451	chd3	99	77.080	Scophthalmus_maximus
ENSPPRG00000000626	CHD3	55	73.077	ENSSDUG00000005792	chd3	95	73.626	Seriola_dumerili
ENSPPRG00000000626	CHD3	91	80.069	ENSSPAG00000013694	chd3	97	80.187	Stegastes_partitus
ENSPPRG00000000626	CHD3	99	97.769	ENSSSCG00000021363	CHD3	100	97.819	Sus_scrofa
ENSPPRG00000000626	CHD3	75	76.892	ENSTRUG00000014990	chd3	89	76.568	Takifugu_rubripes
ENSPPRG00000000626	CHD3	96	73.872	ENSTNIG00000012998	chd3	99	73.465	Tetraodon_nigroviridis
ENSPPRG00000000626	CHD3	64	100.000	ENSTBEG00000011454	-	71	100.000	Tupaia_belangeri
ENSPPRG00000000626	CHD3	97	98.733	ENSTTRG00000010295	CHD3	97	98.733	Tursiops_truncatus
ENSPPRG00000000626	CHD3	92	97.496	ENSUAMG00000005475	CHD3	99	97.496	Ursus_americanus
ENSPPRG00000000626	CHD3	56	100.000	ENSVPAG00000010794	-	62	100.000	Vicugna_pacos
ENSPPRG00000000626	CHD3	94	98.774	ENSVVUG00000028011	CHD3	99	98.774	Vulpes_vulpes
ENSPPRG00000000626	CHD3	99	71.078	ENSXETG00000012991	chd3	97	71.443	Xenopus_tropicalis
ENSPPRG00000000626	CHD3	52	82.976	ENSXCOG00000000809	chd3	96	83.202	Xiphophorus_couchianus
ENSPPRG00000000626	CHD3	79	85.549	ENSXMAG00000016035	chd3	99	85.549	Xiphophorus_maculatus