EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPRG00000000635 (Gene tree)
Gene ID: 109249687
Gene Symbol: SCAF4
Alias: -
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Minus strand
Length: 40774 bases
Position: chrKV860353.1:893728-934501
Accession: 109249687
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000004571	RRM_1	PF00076.22	2.6e-09	1	1
ENSPPRP00000004579	RRM_1	PF00076.22	3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000002196	SCAF4-201	3348	-	ENSPPRP00000004571	1115 (aa)	-	-
ENSPPRT00000002203	SCAF4-202	4032	XM_019420177	ENSPPRP00000004579	1130 (aa)	XP_019275722	-

Gene Model

Click here to download ENSPPRG00000000635's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000000635's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000000635	SCAF4	100	94.143	ENSG00000156304	SCAF4	99	94.143	Homo_sapiens
ENSPPRG00000000635	SCAF4	51	60.150	ENSAPOG00000019615	scaf4b	58	67.005	Acanthochromis_polyacanthus
ENSPPRG00000000635	SCAF4	76	97.300	ENSAMEG00000014987	SCAF4	100	97.300	Ailuropoda_melanoleuca
ENSPPRG00000000635	SCAF4	100	76.115	ENSAPLG00000002509	SCAF4	59	83.488	Anas_platyrhynchos
ENSPPRG00000000635	SCAF4	100	64.404	ENSACAG00000002569	SCAF4	51	84.146	Anolis_carolinensis
ENSPPRG00000000635	SCAF4	100	92.726	ENSANAG00000037494	SCAF4	99	92.550	Aotus_nancymaae
ENSPPRG00000000635	SCAF4	93	50.045	ENSAMXG00000008585	scaf4a	59	62.290	Astyanax_mexicanus
ENSPPRG00000000635	SCAF4	100	93.833	ENSBTAG00000018855	SCAF4	99	93.304	Bos_taurus
ENSPPRG00000000635	SCAF4	100	92.738	ENSCJAG00000008993	SCAF4	99	94.699	Callithrix_jacchus
ENSPPRG00000000635	SCAF4	100	97.701	ENSCAFG00000008863	SCAF4	99	97.701	Canis_familiaris
ENSPPRG00000000635	SCAF4	100	95.491	ENSCAFG00020026019	SCAF4	100	97.421	Canis_lupus_dingo
ENSPPRG00000000635	SCAF4	100	93.651	ENSCHIG00000008385	SCAF4	99	93.474	Capra_hircus
ENSPPRG00000000635	SCAF4	78	93.545	ENSTSYG00000011344	SCAF4	98	93.541	Carlito_syrichta
ENSPPRG00000000635	SCAF4	100	90.053	ENSCPOG00000012443	SCAF4	99	90.229	Cavia_porcellus
ENSPPRG00000000635	SCAF4	100	92.976	ENSCCAG00000033727	SCAF4	99	93.152	Cebus_capucinus
ENSPPRG00000000635	SCAF4	100	92.751	ENSCATG00000030379	SCAF4	100	92.550	Cercocebus_atys
ENSPPRG00000000635	SCAF4	99	90.356	ENSCLAG00000006298	SCAF4	100	89.922	Chinchilla_lanigera
ENSPPRG00000000635	SCAF4	100	93.554	ENSCSAG00000009438	SCAF4	99	93.554	Chlorocebus_sabaeus
ENSPPRG00000000635	SCAF4	100	94.051	ENSCANG00000029847	SCAF4	99	94.051	Colobus_angolensis_palliatus
ENSPPRG00000000635	SCAF4	68	90.000	ENSCGRG00001020821	Scaf4	65	90.260	Cricetulus_griseus_chok1gshd
ENSPPRG00000000635	SCAF4	69	89.161	ENSCGRG00000014360	Scaf4	100	82.098	Cricetulus_griseus_crigri
ENSPPRG00000000635	SCAF4	79	51.233	ENSCSEG00000019549	scaf4a	52	53.313	Cynoglossus_semilaevis
ENSPPRG00000000635	SCAF4	89	49.904	ENSDARG00000077093	scaf4a	56	59.783	Danio_rerio
ENSPPRG00000000635	SCAF4	100	91.350	ENSDNOG00000019014	SCAF4	94	91.174	Dasypus_novemcinctus
ENSPPRG00000000635	SCAF4	91	96.552	ENSETEG00000000583	SCAF4	93	96.552	Echinops_telfairi
ENSPPRG00000000635	SCAF4	100	97.004	ENSEASG00005007756	SCAF4	99	97.004	Equus_asinus_asinus
ENSPPRG00000000635	SCAF4	100	96.919	ENSECAG00000014248	SCAF4	99	96.919	Equus_caballus
ENSPPRG00000000635	SCAF4	58	52.265	ENSELUG00000002779	SCAF8	59	68.841	Esox_lucius
ENSPPRG00000000635	SCAF4	100	99.558	ENSFCAG00000002228	SCAF4	99	99.558	Felis_catus
ENSPPRG00000000635	SCAF4	99	89.455	ENSFDAG00000017780	SCAF4	100	89.369	Fukomys_damarensis
ENSPPRG00000000635	SCAF4	100	77.153	ENSGALG00000033965	SCAF4	58	83.179	Gallus_gallus
ENSPPRG00000000635	SCAF4	91	90.682	ENSGGOG00000015557	SCAF4	99	93.374	Gorilla_gorilla
ENSPPRG00000000635	SCAF4	100	91.251	ENSHGLG00000010582	SCAF4	99	91.951	Heterocephalus_glaber_female
ENSPPRG00000000635	SCAF4	99	91.220	ENSHGLG00100009441	SCAF4	100	91.923	Heterocephalus_glaber_male
ENSPPRG00000000635	SCAF4	69	59.309	ENSIPUG00000011285	scaf4	62	62.253	Ictalurus_punctatus
ENSPPRG00000000635	SCAF4	99	89.078	ENSSTOG00000004450	SCAF4	100	88.541	Ictidomys_tridecemlineatus
ENSPPRG00000000635	SCAF4	100	89.006	ENSJJAG00000019447	Scaf4	99	89.270	Jaculus_jaculus
ENSPPRG00000000635	SCAF4	98	60.969	ENSLACG00000013913	SCAF4	59	68.487	Latimeria_chalumnae
ENSPPRG00000000635	SCAF4	96	57.282	ENSLOCG00000009162	scaf4a	58	66.267	Lepisosteus_oculatus
ENSPPRG00000000635	SCAF4	100	94.054	ENSLAFG00000010710	SCAF4	99	93.369	Loxodonta_africana
ENSPPRG00000000635	SCAF4	100	92.422	ENSMFAG00000037668	SCAF4	99	92.073	Macaca_fascicularis
ENSPPRG00000000635	SCAF4	100	92.334	ENSMMUG00000001712	SCAF4	99	91.986	Macaca_mulatta
ENSPPRG00000000635	SCAF4	99	92.183	ENSMNEG00000032966	SCAF4	99	92.211	Macaca_nemestrina
ENSPPRG00000000635	SCAF4	100	92.496	ENSMLEG00000039674	SCAF4	100	92.583	Mandrillus_leucophaeus
ENSPPRG00000000635	SCAF4	100	76.822	ENSMGAG00000014515	SCAF4	59	83.333	Meleagris_gallopavo
ENSPPRG00000000635	SCAF4	99	88.387	ENSMAUG00000013307	Scaf4	100	88.741	Mesocricetus_auratus
ENSPPRG00000000635	SCAF4	100	93.926	ENSMICG00000005256	SCAF4	99	93.574	Microcebus_murinus
ENSPPRG00000000635	SCAF4	98	91.126	ENSMOCG00000012087	Scaf4	99	87.940	Microtus_ochrogaster
ENSPPRG00000000635	SCAF4	100	85.362	ENSMODG00000021040	SCAF4	99	84.744	Monodelphis_domestica
ENSPPRG00000000635	SCAF4	100	89.089	MGP_CAROLIEiJ_G0020944	Scaf4	95	89.217	Mus_caroli
ENSPPRG00000000635	SCAF4	100	88.774	ENSMUSG00000022983	Scaf4	95	89.161	Mus_musculus
ENSPPRG00000000635	SCAF4	98	87.958	MGP_PahariEiJ_G0016649	Scaf4	96	87.150	Mus_pahari
ENSPPRG00000000635	SCAF4	100	83.513	MGP_SPRETEiJ_G0021850	Scaf4	99	85.096	Mus_spretus
ENSPPRG00000000635	SCAF4	100	95.641	ENSMPUG00000001078	SCAF4	99	95.641	Mustela_putorius_furo
ENSPPRG00000000635	SCAF4	99	78.415	ENSMLUG00000011472	SCAF4	78	84.153	Myotis_lucifugus
ENSPPRG00000000635	SCAF4	100	89.764	ENSNGAG00000005214	Scaf4	99	91.045	Nannospalax_galili
ENSPPRG00000000635	SCAF4	100	93.881	ENSNLEG00000003569	SCAF4	99	93.881	Nomascus_leucogenys
ENSPPRG00000000635	SCAF4	79	89.130	ENSOPRG00000007016	SCAF4	77	89.130	Ochotona_princeps
ENSPPRG00000000635	SCAF4	100	89.455	ENSODEG00000002718	SCAF4	99	89.628	Octodon_degus
ENSPPRG00000000635	SCAF4	71	57.713	ENSONIG00000004687	scaf4a	50	75.000	Oreochromis_niloticus
ENSPPRG00000000635	SCAF4	100	88.472	ENSOCUG00000008336	SCAF4	99	88.210	Oryctolagus_cuniculus
ENSPPRG00000000635	SCAF4	70	95.702	ENSOGAG00000014653	SCAF4	93	95.702	Otolemur_garnettii
ENSPPRG00000000635	SCAF4	99	93.122	ENSOARG00000013894	SCAF4	98	93.234	Ovis_aries
ENSPPRG00000000635	SCAF4	100	94.143	ENSPPAG00000028535	SCAF4	99	94.143	Pan_paniscus
ENSPPRG00000000635	SCAF4	100	94.611	ENSPTIG00000021578	SCAF4	99	94.611	Panthera_tigris_altaica
ENSPPRG00000000635	SCAF4	100	94.143	ENSPTRG00000013848	SCAF4	99	94.143	Pan_troglodytes
ENSPPRG00000000635	SCAF4	100	92.422	ENSPANG00000017332	SCAF4	99	92.509	Papio_anubis
ENSPPRG00000000635	SCAF4	64	62.815	ENSPKIG00000022408	scaf4a	89	65.408	Paramormyrops_kingsleyae
ENSPPRG00000000635	SCAF4	100	77.465	ENSPSIG00000014242	SCAF4	57	84.259	Pelodiscus_sinensis
ENSPPRG00000000635	SCAF4	62	87.393	ENSPCIG00000028183	SCAF4	91	82.920	Phascolarctos_cinereus
ENSPPRG00000000635	SCAF4	53	55.515	ENSPREG00000013510	scaf4b	57	66.837	Poecilia_reticulata
ENSPPRG00000000635	SCAF4	100	94.061	ENSPPYG00000011355	SCAF4	100	94.040	Pongo_abelii
ENSPPRG00000000635	SCAF4	100	83.834	ENSPCAG00000009998	SCAF4	68	82.886	Procavia_capensis
ENSPPRG00000000635	SCAF4	100	93.176	ENSPCOG00000018710	SCAF4	99	92.563	Propithecus_coquereli
ENSPPRG00000000635	SCAF4	100	94.872	ENSPVAG00000005220	SCAF4	99	94.960	Pteropus_vampyrus
ENSPPRG00000000635	SCAF4	76	57.517	ENSPNAG00000016892	scaf4a	59	63.348	Pygocentrus_nattereri
ENSPPRG00000000635	SCAF4	62	89.831	ENSRNOG00000002104	Scaf4	73	95.781	Rattus_norvegicus
ENSPPRG00000000635	SCAF4	99	91.037	ENSRBIG00000040007	SCAF4	61	93.912	Rhinopithecus_bieti
ENSPPRG00000000635	SCAF4	100	94.133	ENSRROG00000029488	SCAF4	99	94.133	Rhinopithecus_roxellana
ENSPPRG00000000635	SCAF4	100	85.424	ENSSHAG00000001581	SCAF4	99	84.541	Sarcophilus_harrisii
ENSPPRG00000000635	SCAF4	89	47.909	ENSSFOG00015006338	scaf4a	54	57.982	Scleropages_formosus
ENSPPRG00000000635	SCAF4	65	59.245	ENSSMAG00000003738	scaf4b	52	72.152	Scophthalmus_maximus
ENSPPRG00000000635	SCAF4	80	52.626	ENSSMAG00000017901	scaf4a	52	52.466	Scophthalmus_maximus
ENSPPRG00000000635	SCAF4	57	61.977	ENSSDUG00000012380	scaf4b	53	70.886	Seriola_dumerili
ENSPPRG00000000635	SCAF4	100	89.616	ENSSARG00000009994	SCAF4	99	89.442	Sorex_araneus
ENSPPRG00000000635	SCAF4	100	92.066	ENSSSCG00000021023	SCAF4	99	91.718	Sus_scrofa
ENSPPRG00000000635	SCAF4	75	72.246	ENSTGUG00000013464	SCAF4	57	85.382	Taeniopygia_guttata
ENSPPRG00000000635	SCAF4	50	58.333	ENSTRUG00000009536	-	63	58.065	Takifugu_rubripes
ENSPPRG00000000635	SCAF4	100	94.700	ENSTTRG00000010963	SCAF4	100	94.081	Tursiops_truncatus
ENSPPRG00000000635	SCAF4	100	95.668	ENSUAMG00000008860	SCAF4	99	95.668	Ursus_americanus
ENSPPRG00000000635	SCAF4	99	95.115	ENSUMAG00000016962	SCAF4	100	95.115	Ursus_maritimus
ENSPPRG00000000635	SCAF4	99	97.693	ENSVVUG00000002953	SCAF4	100	97.693	Vulpes_vulpes
ENSPPRG00000000635	SCAF4	99	54.722	ENSXETG00000007351	scaf4	62	61.925	Xenopus_tropicalis