EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPRG00000001004 (Gene tree)
Gene ID: 109268983
Gene Symbol: ZC3HC1
Alias: -
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Minus strand
Length: 22086 bases
Position: chrKV860295.1:9415121-9437206
Accession: 109268983
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000005063	zf-C3HC	PF07967.13	5.7e-37	1	1
ENSPPRP00000005058	zf-C3HC	PF07967.13	3.2e-36	1	1
ENSPPRP00000005045	zf-C3HC	PF07967.13	1.3e-34	1	1
ENSPPRP00000005045	Rsm1	PF08600.10	3.4e-16	1	2
ENSPPRP00000005045	Rsm1	PF08600.10	3.4e-16	2	2
ENSPPRP00000005063	Rsm1	PF08600.10	4.2e-16	1	2
ENSPPRP00000005063	Rsm1	PF08600.10	4.2e-16	2	2
ENSPPRP00000005058	Rsm1	PF08600.10	2.7e-15	1	2
ENSPPRP00000005058	Rsm1	PF08600.10	2.7e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000002707	ZC3HC1-202	1296	-	ENSPPRP00000005058	431 (aa)	-	-
ENSPPRT00000002690	ZC3HC1-201	1419	-	ENSPPRP00000005045	472 (aa)	-	-
ENSPPRT00000002714	ZC3HC1-203	1509	XM_019452735	ENSPPRP00000005063	502 (aa)	XP_019308280	UPI0009052B56

Gene Model

Click here to download ENSPPRG00000001004's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000001004's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000001004	ZC3HC1	99	91.018	ENSG00000091732	ZC3HC1	99	92.353	Homo_sapiens
ENSPPRG00000001004	ZC3HC1	93	47.720	ENSAPOG00000009078	zc3hc1	95	43.838	Acanthochromis_polyacanthus
ENSPPRG00000001004	ZC3HC1	100	92.460	ENSAMEG00000005425	ZC3HC1	100	92.460	Ailuropoda_melanoleuca
ENSPPRG00000001004	ZC3HC1	92	45.732	ENSACIG00000019513	zc3hc1	95	41.650	Amphilophus_citrinellus
ENSPPRG00000001004	ZC3HC1	93	48.632	ENSAOCG00000024310	zc3hc1	95	44.444	Amphiprion_ocellaris
ENSPPRG00000001004	ZC3HC1	93	48.632	ENSAPEG00000004907	zc3hc1	95	44.444	Amphiprion_percula
ENSPPRG00000001004	ZC3HC1	86	45.540	ENSATEG00000016898	zc3hc1	85	46.387	Anabas_testudineus
ENSPPRG00000001004	ZC3HC1	94	60.000	ENSAPLG00000003832	ZC3HC1	99	61.124	Anas_platyrhynchos
ENSPPRG00000001004	ZC3HC1	100	59.961	ENSACAG00000001638	ZC3HC1	100	60.236	Anolis_carolinensis
ENSPPRG00000001004	ZC3HC1	100	89.559	ENSANAG00000022213	ZC3HC1	100	91.471	Aotus_nancymaae
ENSPPRG00000001004	ZC3HC1	91	44.000	ENSACLG00000025033	zc3hc1	98	43.683	Astatotilapia_calliptera
ENSPPRG00000001004	ZC3HC1	94	43.215	ENSAMXG00000036792	zc3hc1	97	43.215	Astyanax_mexicanus
ENSPPRG00000001004	ZC3HC1	100	90.882	ENSBTAG00000011247	ZC3HC1	100	88.645	Bos_taurus
ENSPPRG00000001004	ZC3HC1	100	89.243	ENSCJAG00000010536	ZC3HC1	100	90.588	Callithrix_jacchus
ENSPPRG00000001004	ZC3HC1	100	92.829	ENSCAFG00000031850	-	100	92.829	Canis_familiaris
ENSPPRG00000001004	ZC3HC1	100	92.430	ENSCAFG00000028735	-	100	92.430	Canis_familiaris
ENSPPRG00000001004	ZC3HC1	100	92.673	ENSCAFG00000001499	-	99	92.673	Canis_familiaris
ENSPPRG00000001004	ZC3HC1	100	92.430	ENSCAFG00000029401	-	99	92.430	Canis_familiaris
ENSPPRG00000001004	ZC3HC1	100	91.667	ENSCAFG00020023333	-	100	91.667	Canis_lupus_dingo
ENSPPRG00000001004	ZC3HC1	100	92.629	ENSCAFG00020006829	-	100	92.629	Canis_lupus_dingo
ENSPPRG00000001004	ZC3HC1	100	82.669	ENSCHIG00000014103	ZC3HC1	100	82.669	Capra_hircus
ENSPPRG00000001004	ZC3HC1	100	88.048	ENSTSYG00000002843	ZC3HC1	100	88.048	Carlito_syrichta
ENSPPRG00000001004	ZC3HC1	96	62.500	ENSCAPG00000016300	ZC3HC1	93	75.723	Cavia_aperea
ENSPPRG00000001004	ZC3HC1	100	85.151	ENSCPOG00000014034	ZC3HC1	100	85.151	Cavia_porcellus
ENSPPRG00000001004	ZC3HC1	100	71.713	ENSCCAG00000020384	ZC3HC1	99	87.168	Cebus_capucinus
ENSPPRG00000001004	ZC3HC1	100	90.951	ENSCATG00000023130	ZC3HC1	100	92.647	Cercocebus_atys
ENSPPRG00000001004	ZC3HC1	100	61.952	ENSCLAG00000008260	ZC3HC1	100	60.239	Chinchilla_lanigera
ENSPPRG00000001004	ZC3HC1	78	89.617	ENSCSAG00000009881	ZC3HC1	97	89.617	Chlorocebus_sabaeus
ENSPPRG00000001004	ZC3HC1	96	87.140	ENSCHOG00000011846	ZC3HC1	99	88.470	Choloepus_hoffmanni
ENSPPRG00000001004	ZC3HC1	100	65.823	ENSCPBG00000017519	ZC3HC1	100	67.460	Chrysemys_picta_bellii
ENSPPRG00000001004	ZC3HC1	100	90.719	ENSCANG00000029091	ZC3HC1	100	92.059	Colobus_angolensis_palliatus
ENSPPRG00000001004	ZC3HC1	100	85.060	ENSCGRG00001018805	Zc3hc1	100	86.471	Cricetulus_griseus_chok1gshd
ENSPPRG00000001004	ZC3HC1	100	83.865	ENSCGRG00000017114	Zc3hc1	100	83.865	Cricetulus_griseus_crigri
ENSPPRG00000001004	ZC3HC1	97	41.996	ENSCSEG00000009284	zc3hc1	94	41.153	Cynoglossus_semilaevis
ENSPPRG00000001004	ZC3HC1	93	45.000	ENSCVAG00000011566	zc3hc1	94	41.975	Cyprinodon_variegatus
ENSPPRG00000001004	ZC3HC1	95	47.216	ENSDARG00000062651	zc3hc1	97	45.968	Danio_rerio
ENSPPRG00000001004	ZC3HC1	100	87.251	ENSDNOG00000045016	ZC3HC1	100	87.251	Dasypus_novemcinctus
ENSPPRG00000001004	ZC3HC1	100	77.490	ENSDORG00000008697	Zc3hc1	100	77.490	Dipodomys_ordii
ENSPPRG00000001004	ZC3HC1	96	88.938	ENSEASG00005008789	ZC3HC1	97	90.265	Equus_asinus_asinus
ENSPPRG00000001004	ZC3HC1	100	90.457	ENSECAG00000017886	ZC3HC1	100	90.457	Equus_caballus
ENSPPRG00000001004	ZC3HC1	84	80.864	ENSEEUG00000003123	ZC3HC1	84	80.864	Erinaceus_europaeus
ENSPPRG00000001004	ZC3HC1	95	43.800	ENSELUG00000023168	zc3hc1	94	45.363	Esox_lucius
ENSPPRG00000001004	ZC3HC1	100	99.072	ENSFCAG00000010429	ZC3HC1	100	99.706	Felis_catus
ENSPPRG00000001004	ZC3HC1	95	58.495	ENSFALG00000005006	ZC3HC1	99	59.570	Ficedula_albicollis
ENSPPRG00000001004	ZC3HC1	100	86.311	ENSFDAG00000019897	ZC3HC1	100	88.235	Fukomys_damarensis
ENSPPRG00000001004	ZC3HC1	94	44.638	ENSFHEG00000020149	zc3hc1	99	40.820	Fundulus_heteroclitus
ENSPPRG00000001004	ZC3HC1	94	42.500	ENSGMOG00000002914	zc3hc1	95	41.458	Gadus_morhua
ENSPPRG00000001004	ZC3HC1	99	61.753	ENSGALG00000008003	ZC3HC1	99	61.753	Gallus_gallus
ENSPPRG00000001004	ZC3HC1	94	44.767	ENSGAFG00000016095	zc3hc1	95	42.480	Gambusia_affinis
ENSPPRG00000001004	ZC3HC1	93	47.432	ENSGACG00000019706	zc3hc1	94	45.287	Gasterosteus_aculeatus
ENSPPRG00000001004	ZC3HC1	82	69.054	ENSGAGG00000016106	ZC3HC1	100	69.054	Gopherus_agassizii
ENSPPRG00000001004	ZC3HC1	99	91.018	ENSGGOG00000015504	ZC3HC1	99	92.353	Gorilla_gorilla
ENSPPRG00000001004	ZC3HC1	92	46.037	ENSHBUG00000008347	zc3hc1	94	42.945	Haplochromis_burtoni
ENSPPRG00000001004	ZC3HC1	100	88.048	ENSHGLG00000005085	ZC3HC1	100	90.000	Heterocephalus_glaber_female
ENSPPRG00000001004	ZC3HC1	100	87.849	ENSHGLG00100011395	ZC3HC1	100	90.000	Heterocephalus_glaber_male
ENSPPRG00000001004	ZC3HC1	95	41.736	ENSHCOG00000014309	zc3hc1	95	41.443	Hippocampus_comes
ENSPPRG00000001004	ZC3HC1	100	87.251	ENSSTOG00000023599	-	100	87.251	Ictidomys_tridecemlineatus
ENSPPRG00000001004	ZC3HC1	93	48.113	ENSKMAG00000015315	zc3hc1	88	43.121	Kryptolebias_marmoratus
ENSPPRG00000001004	ZC3HC1	94	45.028	ENSLBEG00000017325	zc3hc1	95	43.114	Labrus_bergylta
ENSPPRG00000001004	ZC3HC1	80	54.085	ENSLACG00000013032	ZC3HC1	97	54.634	Latimeria_chalumnae
ENSPPRG00000001004	ZC3HC1	99	53.314	ENSLOCG00000015963	zc3hc1	99	51.969	Lepisosteus_oculatus
ENSPPRG00000001004	ZC3HC1	100	86.561	ENSLAFG00000001292	ZC3HC1	100	86.561	Loxodonta_africana
ENSPPRG00000001004	ZC3HC1	100	91.036	ENSMFAG00000030176	ZC3HC1	100	92.647	Macaca_fascicularis
ENSPPRG00000001004	ZC3HC1	100	90.951	ENSMMUG00000006155	ZC3HC1	100	92.647	Macaca_mulatta
ENSPPRG00000001004	ZC3HC1	100	91.235	ENSMNEG00000011833	ZC3HC1	100	92.647	Macaca_nemestrina
ENSPPRG00000001004	ZC3HC1	100	91.183	ENSMLEG00000027328	ZC3HC1	100	92.647	Mandrillus_leucophaeus
ENSPPRG00000001004	ZC3HC1	94	44.467	ENSMAMG00000010691	zc3hc1	94	43.878	Mastacembelus_armatus
ENSPPRG00000001004	ZC3HC1	92	45.732	ENSMZEG00005007142	zc3hc1	94	42.740	Maylandia_zebra
ENSPPRG00000001004	ZC3HC1	99	61.143	ENSMGAG00000002977	ZC3HC1	99	61.252	Meleagris_gallopavo
ENSPPRG00000001004	ZC3HC1	87	79.759	ENSMAUG00000017032	Zc3hc1	92	79.759	Mesocricetus_auratus
ENSPPRG00000001004	ZC3HC1	100	89.095	ENSMICG00000009167	ZC3HC1	100	90.882	Microcebus_murinus
ENSPPRG00000001004	ZC3HC1	100	84.462	ENSMOCG00000015239	Zc3hc1	100	84.462	Microtus_ochrogaster
ENSPPRG00000001004	ZC3HC1	91	41.425	ENSMMOG00000002204	zc3hc1	98	41.071	Mola_mola
ENSPPRG00000001004	ZC3HC1	100	63.462	ENSMODG00000014630	ZC3HC1	100	63.462	Monodelphis_domestica
ENSPPRG00000001004	ZC3HC1	93	46.821	ENSMALG00000014447	zc3hc1	95	43.574	Monopterus_albus
ENSPPRG00000001004	ZC3HC1	99	84.538	MGP_CAROLIEiJ_G0028183	Zc3hc1	99	85.294	Mus_caroli
ENSPPRG00000001004	ZC3HC1	99	83.936	ENSMUSG00000039130	Zc3hc1	99	85.000	Mus_musculus
ENSPPRG00000001004	ZC3HC1	100	78.685	MGP_PahariEiJ_G0021941	Zc3hc1	100	78.685	Mus_pahari
ENSPPRG00000001004	ZC3HC1	99	84.075	MGP_SPRETEiJ_G0029183	Zc3hc1	99	84.075	Mus_spretus
ENSPPRG00000001004	ZC3HC1	95	93.319	ENSMPUG00000005297	ZC3HC1	95	93.319	Mustela_putorius_furo
ENSPPRG00000001004	ZC3HC1	72	81.924	ENSMLUG00000029228	-	99	81.924	Myotis_lucifugus
ENSPPRG00000001004	ZC3HC1	100	87.921	ENSMLUG00000000063	-	100	87.921	Myotis_lucifugus
ENSPPRG00000001004	ZC3HC1	100	86.176	ENSNGAG00000019014	Zc3hc1	100	86.176	Nannospalax_galili
ENSPPRG00000001004	ZC3HC1	92	46.037	ENSNBRG00000004577	zc3hc1	94	42.828	Neolamprologus_brichardi
ENSPPRG00000001004	ZC3HC1	99	89.535	ENSNLEG00000012698	ZC3HC1	99	91.176	Nomascus_leucogenys
ENSPPRG00000001004	ZC3HC1	100	78.088	ENSMEUG00000011023	ZC3HC1	100	78.088	Notamacropus_eugenii
ENSPPRG00000001004	ZC3HC1	76	82.558	ENSOPRG00000007867	-	68	82.558	Ochotona_princeps
ENSPPRG00000001004	ZC3HC1	100	84.919	ENSODEG00000014604	ZC3HC1	100	85.393	Octodon_degus
ENSPPRG00000001004	ZC3HC1	93	46.646	ENSONIG00000011644	zc3hc1	94	43.354	Oreochromis_niloticus
ENSPPRG00000001004	ZC3HC1	96	68.750	ENSOANG00000011460	ZC3HC1	100	70.043	Ornithorhynchus_anatinus
ENSPPRG00000001004	ZC3HC1	100	87.320	ENSOCUG00000017137	ZC3HC1	100	84.158	Oryctolagus_cuniculus
ENSPPRG00000001004	ZC3HC1	94	47.590	ENSORLG00000014409	zc3hc1	94	44.603	Oryzias_latipes
ENSPPRG00000001004	ZC3HC1	94	47.289	ENSORLG00020015874	zc3hc1	94	44.082	Oryzias_latipes_hni
ENSPPRG00000001004	ZC3HC1	95	43.558	ENSORLG00015014641	zc3hc1	94	43.558	Oryzias_latipes_hsok
ENSPPRG00000001004	ZC3HC1	95	45.530	ENSOMEG00000000215	zc3hc1	94	45.530	Oryzias_melastigma
ENSPPRG00000001004	ZC3HC1	94	48.048	ENSOMEG00000020604	zc3hc1	94	45.946	Oryzias_melastigma
ENSPPRG00000001004	ZC3HC1	100	83.466	ENSOGAG00000026193	ZC3HC1	100	83.466	Otolemur_garnettii
ENSPPRG00000001004	ZC3HC1	100	91.254	ENSOARG00000004907	ZC3HC1	99	88.911	Ovis_aries
ENSPPRG00000001004	ZC3HC1	99	91.218	ENSPPAG00000043172	ZC3HC1	99	92.647	Pan_paniscus
ENSPPRG00000001004	ZC3HC1	100	99.304	ENSPTIG00000007823	ZC3HC1	100	99.706	Panthera_tigris_altaica
ENSPPRG00000001004	ZC3HC1	99	90.818	ENSPTRG00000019685	ZC3HC1	99	92.059	Pan_troglodytes
ENSPPRG00000001004	ZC3HC1	100	90.951	ENSPANG00000014229	ZC3HC1	100	92.353	Papio_anubis
ENSPPRG00000001004	ZC3HC1	94	50.470	ENSPKIG00000007172	zc3hc1	95	48.025	Paramormyrops_kingsleyae
ENSPPRG00000001004	ZC3HC1	94	66.450	ENSPSIG00000016646	ZC3HC1	100	59.844	Pelodiscus_sinensis
ENSPPRG00000001004	ZC3HC1	94	41.866	ENSPMGG00000003548	zc3hc1	94	41.866	Periophthalmus_magnuspinnatus
ENSPPRG00000001004	ZC3HC1	100	85.615	ENSPEMG00000000514	Zc3hc1	100	85.615	Peromyscus_maniculatus_bairdii
ENSPPRG00000001004	ZC3HC1	99	75.250	ENSPCIG00000020619	ZC3HC1	100	78.920	Phascolarctos_cinereus
ENSPPRG00000001004	ZC3HC1	93	45.000	ENSPFOG00000003466	zc3hc1	95	42.394	Poecilia_formosa
ENSPPRG00000001004	ZC3HC1	93	44.706	ENSPLAG00000022211	zc3hc1	95	42.276	Poecilia_latipinna
ENSPPRG00000001004	ZC3HC1	93	45.000	ENSPMEG00000001458	zc3hc1	95	42.394	Poecilia_mexicana
ENSPPRG00000001004	ZC3HC1	93	45.000	ENSPREG00000004004	zc3hc1	95	42.394	Poecilia_reticulata
ENSPPRG00000001004	ZC3HC1	99	82.704	ENSPPYG00000017998	ZC3HC1	99	82.704	Pongo_abelii
ENSPPRG00000001004	ZC3HC1	96	82.781	ENSPCAG00000001182	ZC3HC1	100	83.696	Procavia_capensis
ENSPPRG00000001004	ZC3HC1	100	90.239	ENSPCOG00000017354	ZC3HC1	100	91.471	Propithecus_coquereli
ENSPPRG00000001004	ZC3HC1	100	84.263	ENSPVAG00000003195	ZC3HC1	100	83.865	Pteropus_vampyrus
ENSPPRG00000001004	ZC3HC1	92	45.732	ENSPNYG00000020692	zc3hc1	94	42.740	Pundamilia_nyererei
ENSPPRG00000001004	ZC3HC1	99	43.396	ENSPNAG00000020746	zc3hc1	95	44.583	Pygocentrus_nattereri
ENSPPRG00000001004	ZC3HC1	100	83.897	ENSRNOG00000010154	Zc3hc1	100	83.897	Rattus_norvegicus
ENSPPRG00000001004	ZC3HC1	96	89.404	ENSRBIG00000029409	ZC3HC1	100	92.440	Rhinopithecus_bieti
ENSPPRG00000001004	ZC3HC1	100	90.719	ENSRROG00000041831	ZC3HC1	100	92.059	Rhinopithecus_roxellana
ENSPPRG00000001004	ZC3HC1	88	90.441	ENSSBOG00000032787	ZC3HC1	100	90.441	Saimiri_boliviensis_boliviensis
ENSPPRG00000001004	ZC3HC1	96	76.703	ENSSHAG00000002529	ZC3HC1	100	77.204	Sarcophilus_harrisii
ENSPPRG00000001004	ZC3HC1	96	49.237	ENSSFOG00015003667	zc3hc1	91	48.247	Scleropages_formosus
ENSPPRG00000001004	ZC3HC1	95	43.775	ENSSMAG00000000647	zc3hc1	86	43.976	Scophthalmus_maximus
ENSPPRG00000001004	ZC3HC1	98	43.878	ENSSDUG00000004241	zc3hc1	93	44.219	Seriola_dumerili
ENSPPRG00000001004	ZC3HC1	95	44.807	ENSSLDG00000025056	zc3hc1	93	44.219	Seriola_lalandi_dorsalis
ENSPPRG00000001004	ZC3HC1	99	79.056	ENSSARG00000012013	ZC3HC1	99	78.842	Sorex_araneus
ENSPPRG00000001004	ZC3HC1	92	56.364	ENSSPUG00000000778	ZC3HC1	86	58.161	Sphenodon_punctatus
ENSPPRG00000001004	ZC3HC1	95	45.639	ENSSPAG00000020041	zc3hc1	95	45.051	Stegastes_partitus
ENSPPRG00000001004	ZC3HC1	100	88.845	ENSSSCG00000016565	ZC3HC1	100	88.845	Sus_scrofa
ENSPPRG00000001004	ZC3HC1	52	57.317	ENSTGUG00000016262	ZC3HC1	100	57.317	Taeniopygia_guttata
ENSPPRG00000001004	ZC3HC1	92	47.799	ENSTRUG00000020077	zc3hc1	94	41.684	Takifugu_rubripes
ENSPPRG00000001004	ZC3HC1	93	45.566	ENSTNIG00000007585	zc3hc1	99	41.903	Tetraodon_nigroviridis
ENSPPRG00000001004	ZC3HC1	99	78.842	ENSTBEG00000005216	ZC3HC1	99	78.842	Tupaia_belangeri
ENSPPRG00000001004	ZC3HC1	100	85.624	ENSTTRG00000008458	ZC3HC1	100	89.583	Tursiops_truncatus
ENSPPRG00000001004	ZC3HC1	100	92.829	ENSUAMG00000020249	ZC3HC1	100	92.829	Ursus_americanus
ENSPPRG00000001004	ZC3HC1	100	92.430	ENSUMAG00000009268	ZC3HC1	100	92.430	Ursus_maritimus
ENSPPRG00000001004	ZC3HC1	90	89.796	ENSVPAG00000010846	ZC3HC1	77	89.796	Vicugna_pacos
ENSPPRG00000001004	ZC3HC1	96	92.708	ENSVVUG00000012386	ZC3HC1	99	92.708	Vulpes_vulpes
ENSPPRG00000001004	ZC3HC1	91	52.361	ENSXETG00000033900	zc3hc1	95	52.361	Xenopus_tropicalis
ENSPPRG00000001004	ZC3HC1	95	43.844	ENSXCOG00000013570	zc3hc1	96	42.564	Xiphophorus_couchianus
ENSPPRG00000001004	ZC3HC1	96	42.735	ENSXMAG00000010979	zc3hc1	97	42.128	Xiphophorus_maculatus