EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPRG00000001058 (Gene tree)
Gene ID: -
Gene Symbol: CPSF4L
Alias: -
Full Name: cleavage and polyadenylation specific factor 4 like
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Plus strand
Length: 10103 bases
Position: chrKV860320.1:9495768-9505870
Accession: 109277006
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000005201	zf-CCCH	PF00642.24	1.5e-15	1	2
ENSPPRP00000005201	zf-CCCH	PF00642.24	1.5e-15	2	2
ENSPPRP00000005213	zf-CCCH	PF00642.24	1.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000002875	CPSF4L-202	537	-	ENSPPRP00000005213	178 (aa)	-	-
ENSPPRT00000002864	CPSF4L-201	462	XM_019466373	ENSPPRP00000005201	153 (aa)	XP_019321918	-

Gene Model

Click here to download ENSPPRG00000001058's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000001058's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPRG00000001058	CPSF4L	67	75.490	ENSPPRG00000003134	CPSF4	55	54.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000001058	CPSF4L	100	70.779	ENSG00000187959	CPSF4L	97	70.779	Homo_sapiens
ENSPPRG00000001058	CPSF4L	99	49.342	ENSANAG00000026558	-	97	49.342	Aotus_nancymaae
ENSPPRG00000001058	CPSF4L	76	70.690	ENSCJAG00000019911	CPSF4L	81	70.690	Callithrix_jacchus
ENSPPRG00000001058	CPSF4L	52	46.250	ENSCCAG00000030566	CPSF4L	62	46.250	Cebus_capucinus
ENSPPRG00000001058	CPSF4L	80	80.328	ENSCATG00000044555	CPSF4L	90	80.328	Cercocebus_atys
ENSPPRG00000001058	CPSF4L	69	82.857	ENSCSAG00000004429	CPSF4L	58	88.462	Chlorocebus_sabaeus
ENSPPRG00000001058	CPSF4L	100	66.049	ENSCANG00000035042	CPSF4L	99	67.901	Colobus_angolensis_palliatus
ENSPPRG00000001058	CPSF4L	71	70.455	ENSCGRG00001020079	Cpsf4l	73	70.455	Cricetulus_griseus_chok1gshd
ENSPPRG00000001058	CPSF4L	71	70.455	ENSCGRG00000010419	Cpsf4l	73	70.455	Cricetulus_griseus_crigri
ENSPPRG00000001058	CPSF4L	82	78.571	ENSDNOG00000014458	CPSF4L	82	86.408	Dasypus_novemcinctus
ENSPPRG00000001058	CPSF4L	67	87.379	ENSEASG00005018763	CPSF4L	93	66.879	Equus_asinus_asinus
ENSPPRG00000001058	CPSF4L	67	87.379	ENSECAG00000024813	CPSF4L	93	66.879	Equus_caballus
ENSPPRG00000001058	CPSF4L	99	73.026	ENSFCAG00000004745	CPSF4L	51	73.026	Felis_catus
ENSPPRG00000001058	CPSF4L	100	72.078	ENSGGOG00000026659	CPSF4L	97	72.078	Gorilla_gorilla
ENSPPRG00000001058	CPSF4L	71	77.778	ENSSTOG00000001849	CPSF4L	60	81.731	Ictidomys_tridecemlineatus
ENSPPRG00000001058	CPSF4L	69	83.019	ENSLAFG00000010697	CPSF4L	88	61.146	Loxodonta_africana
ENSPPRG00000001058	CPSF4L	100	67.974	ENSMFAG00000037840	CPSF4L	97	67.974	Macaca_fascicularis
ENSPPRG00000001058	CPSF4L	100	67.974	ENSMMUG00000001271	CPSF4L	97	67.974	Macaca_mulatta
ENSPPRG00000001058	CPSF4L	100	67.974	ENSMNEG00000045419	CPSF4L	97	67.974	Macaca_nemestrina
ENSPPRG00000001058	CPSF4L	100	67.320	ENSMLEG00000038527	CPSF4L	97	67.320	Mandrillus_leucophaeus
ENSPPRG00000001058	CPSF4L	67	77.670	ENSMAUG00000019519	-	80	70.455	Mesocricetus_auratus
ENSPPRG00000001058	CPSF4L	68	85.577	ENSMICG00000007503	CPSF4L	60	88.462	Microcebus_murinus
ENSPPRG00000001058	CPSF4L	64	75.000	ENSMOCG00000015313	-	83	75.000	Microtus_ochrogaster
ENSPPRG00000001058	CPSF4L	67	75.490	ENSMODG00000025672	CPSF4L	93	56.209	Monodelphis_domestica
ENSPPRG00000001058	CPSF4L	76	62.000	MGP_CAROLIEiJ_G0017369	-	67	70.874	Mus_caroli
ENSPPRG00000001058	CPSF4L	67	71.845	ENSMUSG00000018727	Cpsf4l	67	71.845	Mus_musculus
ENSPPRG00000001058	CPSF4L	67	75.728	MGP_PahariEiJ_G0018499	-	67	75.728	Mus_pahari
ENSPPRG00000001058	CPSF4L	67	71.845	MGP_SPRETEiJ_G0018215	-	67	71.845	Mus_spretus
ENSPPRG00000001058	CPSF4L	97	61.798	ENSMPUG00000014276	CPSF4L	100	61.798	Mustela_putorius_furo
ENSPPRG00000001058	CPSF4L	78	67.227	ENSMLUG00000009617	CPSF4L	58	81.731	Myotis_lucifugus
ENSPPRG00000001058	CPSF4L	65	82.000	ENSNGAG00000009325	-	61	84.615	Nannospalax_galili
ENSPPRG00000001058	CPSF4L	100	72.727	ENSNLEG00000001420	CPSF4L	97	72.727	Nomascus_leucogenys
ENSPPRG00000001058	CPSF4L	66	76.238	ENSMEUG00000004051	-	99	76.238	Notamacropus_eugenii
ENSPPRG00000001058	CPSF4L	93	66.901	ENSOPRG00000007484	-	93	66.901	Ochotona_princeps
ENSPPRG00000001058	CPSF4L	100	71.429	ENSPPAG00000037000	-	97	71.429	Pan_paniscus
ENSPPRG00000001058	CPSF4L	100	100.000	ENSPTIG00000012676	CPSF4L	100	100.000	Panthera_tigris_altaica
ENSPPRG00000001058	CPSF4L	100	71.429	ENSPTRG00000009598	CPSF4L	97	71.429	Pan_troglodytes
ENSPPRG00000001058	CPSF4L	100	70.779	ENSPANG00000020331	CPSF4L	97	70.779	Papio_anubis
ENSPPRG00000001058	CPSF4L	97	57.542	ENSPEMG00000011680	Cpsf4l	67	75.728	Peromyscus_maniculatus_bairdii
ENSPPRG00000001058	CPSF4L	85	58.599	ENSPCIG00000001889	CPSF4L	91	58.599	Phascolarctos_cinereus
ENSPPRG00000001058	CPSF4L	100	71.429	ENSPPYG00000008589	-	97	71.429	Pongo_abelii
ENSPPRG00000001058	CPSF4L	83	79.528	ENSPCOG00000021801	CPSF4L	86	79.528	Propithecus_coquereli
ENSPPRG00000001058	CPSF4L	100	69.872	ENSPVAG00000006736	CPSF4L	99	69.872	Pteropus_vampyrus
ENSPPRG00000001058	CPSF4L	100	66.667	ENSRBIG00000029048	CPSF4L	99	68.519	Rhinopithecus_bieti
ENSPPRG00000001058	CPSF4L	78	75.000	ENSRROG00000037051	CPSF4L	81	67.105	Rhinopithecus_roxellana
ENSPPRG00000001058	CPSF4L	100	76.623	ENSTTRG00000005243	CPSF4L	98	76.623	Tursiops_truncatus
ENSPPRG00000001058	CPSF4L	58	92.308	ENSUAMG00000007728	CPSF4L	66	92.308	Ursus_americanus
ENSPPRG00000001058	CPSF4L	58	92.308	ENSUMAG00000007869	CPSF4L	66	92.308	Ursus_maritimus