EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPRG00000001370 (Gene tree)
Gene ID: 109255258
Gene Symbol: PUM1
Alias: -
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Plus strand
Length: 139517 bases
Position: chrKV860399.1:3728706-3868222
Accession: 109255258
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000005438	PUF	PF00806.19	3.1e-72	1	8
ENSPPRP00000005438	PUF	PF00806.19	3.1e-72	2	8
ENSPPRP00000005438	PUF	PF00806.19	3.1e-72	3	8
ENSPPRP00000005438	PUF	PF00806.19	3.1e-72	4	8
ENSPPRP00000005438	PUF	PF00806.19	3.1e-72	5	8
ENSPPRP00000005438	PUF	PF00806.19	3.1e-72	6	8
ENSPPRP00000005438	PUF	PF00806.19	3.1e-72	7	8
ENSPPRP00000005438	PUF	PF00806.19	3.1e-72	8	8
ENSPPRP00000005349	PUF	PF00806.19	1.5e-71	1	8
ENSPPRP00000005349	PUF	PF00806.19	1.5e-71	2	8
ENSPPRP00000005349	PUF	PF00806.19	1.5e-71	3	8
ENSPPRP00000005349	PUF	PF00806.19	1.5e-71	4	8
ENSPPRP00000005349	PUF	PF00806.19	1.5e-71	5	8
ENSPPRP00000005349	PUF	PF00806.19	1.5e-71	6	8
ENSPPRP00000005349	PUF	PF00806.19	1.5e-71	7	8
ENSPPRP00000005349	PUF	PF00806.19	1.5e-71	8	8
ENSPPRP00000005358	PUF	PF00806.19	7.6e-71	1	8
ENSPPRP00000005358	PUF	PF00806.19	7.6e-71	2	8
ENSPPRP00000005358	PUF	PF00806.19	7.6e-71	3	8
ENSPPRP00000005358	PUF	PF00806.19	7.6e-71	4	8
ENSPPRP00000005358	PUF	PF00806.19	7.6e-71	5	8
ENSPPRP00000005358	PUF	PF00806.19	7.6e-71	6	8
ENSPPRP00000005358	PUF	PF00806.19	7.6e-71	7	8
ENSPPRP00000005358	PUF	PF00806.19	7.6e-71	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000003013	PUM1-201	3384	XM_019429796	ENSPPRP00000005349	1127 (aa)	XP_019285341	-
ENSPPRT00000003096	PUM1-203	3034	XM_019429806	ENSPPRP00000005438	944 (aa)	XP_019285351	UPI000DE7E9ED
ENSPPRT00000003022	PUM1-202	3675	XM_019429787	ENSPPRP00000005358	1224 (aa)	XP_019285332	UPI0002988E41

Gene Model

Click here to download ENSPPRG00000001370's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000001370's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPRG00000001370	PUM1	84	87.765	ENSPPRG00000021443	PUM2	100	77.059

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000001370	PUM1	100	100.000	ENSG00000134644	PUM1	100	100.000	Homo_sapiens
ENSPPRG00000001370	PUM1	100	81.436	ENSAPOG00000021632	pum1	100	91.084	Acanthochromis_polyacanthus
ENSPPRG00000001370	PUM1	100	100.000	ENSAMEG00000017656	PUM1	100	99.511	Ailuropoda_melanoleuca
ENSPPRG00000001370	PUM1	100	81.436	ENSACIG00000021013	pum1	100	76.656	Amphilophus_citrinellus
ENSPPRG00000001370	PUM1	100	81.436	ENSAOCG00000003944	pum1	100	77.606	Amphiprion_ocellaris
ENSPPRG00000001370	PUM1	100	81.436	ENSAPEG00000014550	pum1	100	77.606	Amphiprion_percula
ENSPPRG00000001370	PUM1	100	81.436	ENSATEG00000016004	pum1	100	91.084	Anabas_testudineus
ENSPPRG00000001370	PUM1	100	98.010	ENSAPLG00000009351	PUM1	100	97.645	Anas_platyrhynchos
ENSPPRG00000001370	PUM1	100	96.513	ENSACAG00000000682	PUM1	98	95.875	Anolis_carolinensis
ENSPPRG00000001370	PUM1	100	100.000	ENSANAG00000027865	PUM1	100	100.000	Aotus_nancymaae
ENSPPRG00000001370	PUM1	85	81.188	ENSACLG00000019354	pum1	100	79.093	Astatotilapia_calliptera
ENSPPRG00000001370	PUM1	100	84.615	ENSAMXG00000020607	pum1	96	79.264	Astyanax_mexicanus
ENSPPRG00000001370	PUM1	100	100.000	ENSBTAG00000018979	PUM1	100	100.000	Bos_taurus
ENSPPRG00000001370	PUM1	100	100.000	ENSCJAG00000006035	PUM1	100	100.000	Callithrix_jacchus
ENSPPRG00000001370	PUM1	100	100.000	ENSCAFG00000011205	PUM1	100	97.477	Canis_familiaris
ENSPPRG00000001370	PUM1	89	99.626	ENSCAFG00020024616	PUM1	99	99.051	Canis_lupus_dingo
ENSPPRG00000001370	PUM1	100	100.000	ENSCHIG00000012952	PUM1	100	99.633	Capra_hircus
ENSPPRG00000001370	PUM1	100	99.306	ENSTSYG00000008868	PUM1	100	99.306	Carlito_syrichta
ENSPPRG00000001370	PUM1	100	99.306	ENSCPOG00000031613	PUM1	100	99.306	Cavia_porcellus
ENSPPRG00000001370	PUM1	100	100.000	ENSCATG00000017991	PUM1	100	100.000	Cercocebus_atys
ENSPPRG00000001370	PUM1	100	99.306	ENSCLAG00000007662	PUM1	100	99.306	Chinchilla_lanigera
ENSPPRG00000001370	PUM1	100	100.000	ENSCSAG00000001028	PUM1	100	98.667	Chlorocebus_sabaeus
ENSPPRG00000001370	PUM1	92	100.000	ENSCHOG00000010245	PUM1	93	96.275	Choloepus_hoffmanni
ENSPPRG00000001370	PUM1	100	97.987	ENSCPBG00000009288	PUM1	100	98.309	Chrysemys_picta_bellii
ENSPPRG00000001370	PUM1	100	100.000	ENSCANG00000042606	PUM1	100	100.000	Colobus_angolensis_palliatus
ENSPPRG00000001370	PUM1	100	99.306	ENSCGRG00001024949	Pum1	100	99.306	Cricetulus_griseus_chok1gshd
ENSPPRG00000001370	PUM1	100	99.306	ENSCGRG00000014197	Pum1	100	99.306	Cricetulus_griseus_crigri
ENSPPRG00000001370	PUM1	85	81.165	ENSCSEG00000015981	pum1	100	77.798	Cynoglossus_semilaevis
ENSPPRG00000001370	PUM1	100	80.941	ENSCVAG00000007043	pum1	100	75.868	Cyprinodon_variegatus
ENSPPRG00000001370	PUM1	100	85.112	ENSDARG00000099256	pum1	100	79.766	Danio_rerio
ENSPPRG00000001370	PUM1	100	100.000	ENSDNOG00000010939	PUM1	100	99.159	Dasypus_novemcinctus
ENSPPRG00000001370	PUM1	82	98.792	ENSDORG00000001875	Pum1	100	98.792	Dipodomys_ordii
ENSPPRG00000001370	PUM1	85	100.000	ENSETEG00000004355	PUM1	87	93.945	Echinops_telfairi
ENSPPRG00000001370	PUM1	100	100.000	ENSEASG00005010813	PUM1	100	99.411	Equus_asinus_asinus
ENSPPRG00000001370	PUM1	100	99.306	ENSECAG00000021369	PUM1	100	99.243	Equus_caballus
ENSPPRG00000001370	PUM1	80	100.000	ENSEEUG00000003871	PUM1	77	100.000	Erinaceus_europaeus
ENSPPRG00000001370	PUM1	100	83.476	ENSELUG00000002409	pum1	100	83.767	Esox_lucius
ENSPPRG00000001370	PUM1	100	100.000	ENSFCAG00000010374	PUM1	100	100.000	Felis_catus
ENSPPRG00000001370	PUM1	100	96.663	ENSFALG00000001214	PUM1	97	95.142	Ficedula_albicollis
ENSPPRG00000001370	PUM1	100	99.306	ENSFDAG00000011319	PUM1	100	99.306	Fukomys_damarensis
ENSPPRG00000001370	PUM1	70	88.593	ENSGMOG00000010491	pum1	100	74.835	Gadus_morhua
ENSPPRG00000001370	PUM1	100	98.259	ENSGALG00000042598	PUM1	99	98.988	Gallus_gallus
ENSPPRG00000001370	PUM1	100	81.064	ENSGAFG00000015617	pum1	100	90.361	Gambusia_affinis
ENSPPRG00000001370	PUM1	100	81.158	ENSGACG00000005717	pum1	100	76.442	Gasterosteus_aculeatus
ENSPPRG00000001370	PUM1	100	97.761	ENSGAGG00000001290	PUM1	99	98.785	Gopherus_agassizii
ENSPPRG00000001370	PUM1	100	100.000	ENSGGOG00000011983	PUM1	100	100.000	Gorilla_gorilla
ENSPPRG00000001370	PUM1	100	81.188	ENSHBUG00000018718	pum1	100	76.446	Haplochromis_burtoni
ENSPPRG00000001370	PUM1	100	98.729	ENSHGLG00000013819	Pum1	100	98.907	Heterocephalus_glaber_female
ENSPPRG00000001370	PUM1	100	98.729	ENSHGLG00100008621	Pum1	100	98.907	Heterocephalus_glaber_male
ENSPPRG00000001370	PUM1	100	82.882	ENSIPUG00000020421	pum1	100	78.138	Ictalurus_punctatus
ENSPPRG00000001370	PUM1	100	100.000	ENSSTOG00000010757	PUM1	100	100.000	Ictidomys_tridecemlineatus
ENSPPRG00000001370	PUM1	100	100.000	ENSJJAG00000000530	Pum1	100	100.000	Jaculus_jaculus
ENSPPRG00000001370	PUM1	100	80.569	ENSKMAG00000003481	pum1	100	76.033	Kryptolebias_marmoratus
ENSPPRG00000001370	PUM1	100	80.421	ENSLBEG00000002527	pum1	100	75.993	Labrus_bergylta
ENSPPRG00000001370	PUM1	100	88.848	ENSLACG00000017188	PUM1	99	86.761	Latimeria_chalumnae
ENSPPRG00000001370	PUM1	100	91.677	ENSLOCG00000005210	pum1	99	88.314	Lepisosteus_oculatus
ENSPPRG00000001370	PUM1	100	98.383	ENSLAFG00000003178	PUM1	100	98.907	Loxodonta_africana
ENSPPRG00000001370	PUM1	100	100.000	ENSMFAG00000010291	PUM1	100	100.000	Macaca_fascicularis
ENSPPRG00000001370	PUM1	100	100.000	ENSMMUG00000013520	PUM1	100	100.000	Macaca_mulatta
ENSPPRG00000001370	PUM1	100	100.000	ENSMNEG00000034639	PUM1	100	100.000	Macaca_nemestrina
ENSPPRG00000001370	PUM1	100	100.000	ENSMLEG00000038743	PUM1	100	100.000	Mandrillus_leucophaeus
ENSPPRG00000001370	PUM1	100	81.188	ENSMAMG00000011606	pum1	100	76.529	Mastacembelus_armatus
ENSPPRG00000001370	PUM1	100	81.188	ENSMZEG00005005834	pum1	100	76.446	Maylandia_zebra
ENSPPRG00000001370	PUM1	100	97.886	ENSMGAG00000000724	PUM1	100	97.645	Meleagris_gallopavo
ENSPPRG00000001370	PUM1	100	99.306	ENSMAUG00000022090	Pum1	100	99.306	Mesocricetus_auratus
ENSPPRG00000001370	PUM1	99	97.887	ENSMICG00000012213	-	100	96.922	Microcebus_murinus
ENSPPRG00000001370	PUM1	100	99.364	ENSMICG00000007713	-	100	99.411	Microcebus_murinus
ENSPPRG00000001370	PUM1	100	98.729	ENSMOCG00000015463	Pum1	100	98.907	Microtus_ochrogaster
ENSPPRG00000001370	PUM1	87	88.276	ENSMMOG00000019817	pum1	100	91.283	Mola_mola
ENSPPRG00000001370	PUM1	100	97.637	ENSMODG00000017067	PUM1	100	97.899	Monodelphis_domestica
ENSPPRG00000001370	PUM1	87	88.506	ENSMALG00000016399	pum1	100	91.084	Monopterus_albus
ENSPPRG00000001370	PUM1	100	98.611	MGP_CAROLIEiJ_G0026549	Pum1	100	98.737	Mus_caroli
ENSPPRG00000001370	PUM1	100	99.306	ENSMUSG00000028580	Pum1	100	99.306	Mus_musculus
ENSPPRG00000001370	PUM1	100	99.306	MGP_PahariEiJ_G0028881	Pum1	100	99.306	Mus_pahari
ENSPPRG00000001370	PUM1	100	99.306	MGP_SPRETEiJ_G0027529	Pum1	100	99.306	Mus_spretus
ENSPPRG00000001370	PUM1	100	100.000	ENSMPUG00000015454	PUM1	100	99.495	Mustela_putorius_furo
ENSPPRG00000001370	PUM1	100	100.000	ENSMLUG00000006490	PUM1	100	99.327	Myotis_lucifugus
ENSPPRG00000001370	PUM1	100	99.364	ENSNGAG00000002378	Pum1	100	99.364	Nannospalax_galili
ENSPPRG00000001370	PUM1	100	78.556	ENSNBRG00000010689	pum1	100	83.684	Neolamprologus_brichardi
ENSPPRG00000001370	PUM1	100	99.306	ENSNLEG00000001151	PUM1	100	99.306	Nomascus_leucogenys
ENSPPRG00000001370	PUM1	80	100.000	ENSMEUG00000000976	-	78	97.297	Notamacropus_eugenii
ENSPPRG00000001370	PUM1	81	99.406	ENSOPRG00000001776	PUM1	73	99.406	Ochotona_princeps
ENSPPRG00000001370	PUM1	100	98.835	ENSODEG00000003465	PUM1	100	99.074	Octodon_degus
ENSPPRG00000001370	PUM1	100	81.740	ENSONIG00000002290	pum1	100	76.777	Oreochromis_niloticus
ENSPPRG00000001370	PUM1	80	79.439	ENSOANG00000004902	-	100	77.528	Ornithorhynchus_anatinus
ENSPPRG00000001370	PUM1	100	100.000	ENSOCUG00000008641	PUM1	99	98.823	Oryctolagus_cuniculus
ENSPPRG00000001370	PUM1	100	82.054	ENSORLG00000011482	pum1	100	76.194	Oryzias_latipes
ENSPPRG00000001370	PUM1	100	82.178	ENSORLG00020019461	pum1	100	76.194	Oryzias_latipes_hni
ENSPPRG00000001370	PUM1	100	82.178	ENSORLG00015011375	pum1	100	76.277	Oryzias_latipes_hsok
ENSPPRG00000001370	PUM1	87	92.771	ENSOMEG00000009312	pum1	100	90.361	Oryzias_melastigma
ENSPPRG00000001370	PUM1	100	99.306	ENSOGAG00000011063	PUM1	100	96.558	Otolemur_garnettii
ENSPPRG00000001370	PUM1	100	100.000	ENSOARG00000001899	PUM1	100	99.517	Ovis_aries
ENSPPRG00000001370	PUM1	100	100.000	ENSPPAG00000044003	PUM1	100	100.000	Pan_paniscus
ENSPPRG00000001370	PUM1	100	100.000	ENSPTIG00000010798	PUM1	100	100.000	Panthera_tigris_altaica
ENSPPRG00000001370	PUM1	100	100.000	ENSPTRG00000000453	PUM1	100	100.000	Pan_troglodytes
ENSPPRG00000001370	PUM1	100	100.000	ENSPANG00000016338	PUM1	100	100.000	Papio_anubis
ENSPPRG00000001370	PUM1	100	82.742	ENSPKIG00000010578	pum1	100	78.300	Paramormyrops_kingsleyae
ENSPPRG00000001370	PUM1	100	98.254	ENSPSIG00000014118	PUM1	100	98.064	Pelodiscus_sinensis
ENSPPRG00000001370	PUM1	100	76.923	ENSPMGG00000005836	pum1	100	82.130	Periophthalmus_magnuspinnatus
ENSPPRG00000001370	PUM1	100	99.306	ENSPEMG00000010009	Pum1	100	99.306	Peromyscus_maniculatus_bairdii
ENSPPRG00000001370	PUM1	100	97.886	ENSPCIG00000014151	PUM1	100	98.309	Phascolarctos_cinereus
ENSPPRG00000001370	PUM1	93	83.867	ENSPFOG00000007289	pum1	99	82.569	Poecilia_formosa
ENSPPRG00000001370	PUM1	100	82.963	ENSPLAG00000007256	pum1	100	78.342	Poecilia_latipinna
ENSPPRG00000001370	PUM1	85	83.086	ENSPMEG00000019543	pum1	99	78.473	Poecilia_mexicana
ENSPPRG00000001370	PUM1	100	81.064	ENSPREG00000005195	pum1	100	81.189	Poecilia_reticulata
ENSPPRG00000001370	PUM1	100	100.000	ENSPPYG00000001621	PUM1	100	97.690	Pongo_abelii
ENSPPRG00000001370	PUM1	85	99.074	ENSPCAG00000001979	PUM1	76	99.691	Procavia_capensis
ENSPPRG00000001370	PUM1	100	99.364	ENSPCOG00000004398	PUM1	100	99.411	Propithecus_coquereli
ENSPPRG00000001370	PUM1	100	100.000	ENSPVAG00000005207	PUM1	99	96.478	Pteropus_vampyrus
ENSPPRG00000001370	PUM1	100	81.188	ENSPNYG00000009518	pum1	100	81.446	Pundamilia_nyererei
ENSPPRG00000001370	PUM1	100	84.864	ENSPNAG00000026728	pum1	100	80.689	Pygocentrus_nattereri
ENSPPRG00000001370	PUM1	100	99.306	ENSRNOG00000011709	Pum1	100	98.822	Rattus_norvegicus
ENSPPRG00000001370	PUM1	100	100.000	ENSRBIG00000042521	PUM1	100	100.000	Rhinopithecus_bieti
ENSPPRG00000001370	PUM1	100	100.000	ENSRROG00000020156	PUM1	100	100.000	Rhinopithecus_roxellana
ENSPPRG00000001370	PUM1	100	100.000	ENSSBOG00000032037	PUM1	100	100.000	Saimiri_boliviensis_boliviensis
ENSPPRG00000001370	PUM1	100	97.637	ENSSHAG00000010918	PUM1	100	97.815	Sarcophilus_harrisii
ENSPPRG00000001370	PUM1	100	81.188	ENSSMAG00000010918	pum1	100	91.084	Scophthalmus_maximus
ENSPPRG00000001370	PUM1	100	81.312	ENSSDUG00000009021	pum1	100	76.777	Seriola_dumerili
ENSPPRG00000001370	PUM1	100	81.312	ENSSLDG00000009667	pum1	100	78.860	Seriola_lalandi_dorsalis
ENSPPRG00000001370	PUM1	99	100.000	ENSSARG00000003055	PUM1	94	98.430	Sorex_araneus
ENSPPRG00000001370	PUM1	100	98.007	ENSSPUG00000006267	PUM1	100	97.306	Sphenodon_punctatus
ENSPPRG00000001370	PUM1	100	81.436	ENSSPAG00000016636	pum1	100	77.606	Stegastes_partitus
ENSPPRG00000001370	PUM1	100	100.000	ENSSSCG00000003591	PUM1	100	100.000	Sus_scrofa
ENSPPRG00000001370	PUM1	100	81.064	ENSTRUG00000013121	pum1	100	83.313	Takifugu_rubripes
ENSPPRG00000001370	PUM1	100	80.841	ENSTNIG00000016983	pum1	99	76.763	Tetraodon_nigroviridis
ENSPPRG00000001370	PUM1	84	100.000	ENSTBEG00000013810	PUM1	89	95.122	Tupaia_belangeri
ENSPPRG00000001370	PUM1	92	99.635	ENSTTRG00000007436	PUM1	90	99.635	Tursiops_truncatus
ENSPPRG00000001370	PUM1	98	100.000	ENSUAMG00000018262	-	100	99.354	Ursus_americanus
ENSPPRG00000001370	PUM1	94	100.000	ENSUMAG00000009211	PUM1	100	100.000	Ursus_maritimus
ENSPPRG00000001370	PUM1	100	99.502	ENSVPAG00000005902	PUM1	92	99.875	Vicugna_pacos
ENSPPRG00000001370	PUM1	100	100.000	ENSVVUG00000014631	PUM1	100	100.000	Vulpes_vulpes
ENSPPRG00000001370	PUM1	100	88.696	ENSXETG00000012904	pum1	99	87.490	Xenopus_tropicalis
ENSPPRG00000001370	PUM1	100	81.064	ENSXMAG00000002945	pum1	100	78.135	Xiphophorus_maculatus