EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPRG00000001573 (Gene tree)
Gene ID: 109253616
Gene Symbol: PATZ1
Alias: -
Full Name: POZ/BTB and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Minus strand
Length: 20562 bases
Position: chrKV860378.1:6041631-6062192
Accession: 109253616
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000006002	zf-C2H2	PF00096.26	2.2e-26	1	5
ENSPPRP00000006002	zf-C2H2	PF00096.26	2.2e-26	2	5
ENSPPRP00000006002	zf-C2H2	PF00096.26	2.2e-26	3	5
ENSPPRP00000006002	zf-C2H2	PF00096.26	2.2e-26	4	5
ENSPPRP00000006002	zf-C2H2	PF00096.26	2.2e-26	5	5
ENSPPRP00000005992	zf-C2H2	PF00096.26	4.5e-20	1	4
ENSPPRP00000005992	zf-C2H2	PF00096.26	4.5e-20	2	4
ENSPPRP00000005992	zf-C2H2	PF00096.26	4.5e-20	3	4
ENSPPRP00000005992	zf-C2H2	PF00096.26	4.5e-20	4	4
ENSPPRP00000005997	zf-C2H2	PF00096.26	1.3e-15	1	3
ENSPPRP00000005997	zf-C2H2	PF00096.26	1.3e-15	2	3
ENSPPRP00000005997	zf-C2H2	PF00096.26	1.3e-15	3	3
ENSPPRP00000006002	zf-met	PF12874.7	2.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000003687	PATZ1-201	3325	XM_019426740	ENSPPRP00000005997	537 (aa)	XP_019282285	UPI00090501EF
ENSPPRT00000003691	PATZ1-202	3974	XM_019426737	ENSPPRP00000005992	641 (aa)	XP_019282282	UPI00004BE6BB
ENSPPRT00000003701	PATZ1-203	4118	XM_019426734	ENSPPRP00000006002	687 (aa)	XP_019282279	UPI00004BE6BA

Gene Model

Click here to download ENSPPRG00000001573's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000001573's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPRG00000001573	PATZ1	55	30.962	ENSPPRG00000011201	-	78	33.333
ENSPPRG00000001573	PATZ1	53	32.941	ENSPPRG00000007804	ZFP1	60	30.556
ENSPPRG00000001573	PATZ1	53	34.728	ENSPPRG00000014343	ZNF226	68	38.462
ENSPPRG00000001573	PATZ1	54	33.333	ENSPPRG00000015186	ZNF112	55	36.242
ENSPPRG00000001573	PATZ1	51	34.513	ENSPPRG00000011771	ZNF574	59	32.240
ENSPPRG00000001573	PATZ1	65	46.429	ENSPPRG00000001009	BCL6B	58	46.429
ENSPPRG00000001573	PATZ1	53	32.753	ENSPPRG00000024607	ZFP69B	52	32.753
ENSPPRG00000001573	PATZ1	52	37.037	ENSPPRG00000012906	ZNF236	59	37.037
ENSPPRG00000001573	PATZ1	55	31.122	ENSPPRG00000015444	ZNF319	79	31.122
ENSPPRG00000001573	PATZ1	70	39.823	ENSPPRG00000013659	ZBTB24	50	44.643
ENSPPRG00000001573	PATZ1	56	30.952	ENSPPRG00000001020	PRDM5	81	36.054
ENSPPRG00000001573	PATZ1	53	34.934	ENSPPRG00000014300	ZNF234	80	39.130
ENSPPRG00000001573	PATZ1	53	37.059	ENSPPRG00000000109	-	62	49.275
ENSPPRG00000001573	PATZ1	69	41.818	ENSPPRG00000009152	ZBTB49	52	32.443
ENSPPRG00000001573	PATZ1	53	33.333	ENSPPRG00000014318	ZNF317	70	40.860
ENSPPRG00000001573	PATZ1	82	37.895	ENSPPRG00000003993	ZBTB14	57	38.889
ENSPPRG00000001573	PATZ1	97	32.618	ENSPPRG00000007156	MYNN	89	36.145
ENSPPRG00000001573	PATZ1	56	31.250	ENSPPRG00000001340	ZFAT	62	31.250
ENSPPRG00000001573	PATZ1	51	31.683	ENSPPRG00000002587	ZNF81	59	38.043
ENSPPRG00000001573	PATZ1	51	35.673	ENSPPRG00000003132	ZSCAN22	51	35.915

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000001573	PATZ1	100	99.376	ENSG00000100105	PATZ1	100	99.376	Homo_sapiens
ENSPPRG00000001573	PATZ1	99	59.847	ENSAPOG00000018447	patz1	100	57.331	Acanthochromis_polyacanthus
ENSPPRG00000001573	PATZ1	100	99.854	ENSAMEG00000007074	PATZ1	100	99.854	Ailuropoda_melanoleuca
ENSPPRG00000001573	PATZ1	100	60.232	ENSACIG00000016779	patz1	100	59.961	Amphilophus_citrinellus
ENSPPRG00000001573	PATZ1	100	57.563	ENSAPEG00000013354	patz1	100	57.703	Amphiprion_percula
ENSPPRG00000001573	PATZ1	100	62.353	ENSATEG00000011260	patz1	100	62.157	Anabas_testudineus
ENSPPRG00000001573	PATZ1	85	91.952	ENSAPLG00000003934	PATZ1	99	90.925	Anas_platyrhynchos
ENSPPRG00000001573	PATZ1	100	99.376	ENSANAG00000029603	PATZ1	100	99.376	Aotus_nancymaae
ENSPPRG00000001573	PATZ1	97	62.524	ENSAMXG00000002273	patz1	98	62.147	Astyanax_mexicanus
ENSPPRG00000001573	PATZ1	100	99.854	ENSBTAG00000005478	PATZ1	100	99.854	Bos_taurus
ENSPPRG00000001573	PATZ1	100	99.376	ENSCJAG00000010978	PATZ1	100	99.376	Callithrix_jacchus
ENSPPRG00000001573	PATZ1	100	100.000	ENSCAFG00000013087	PATZ1	100	100.000	Canis_familiaris
ENSPPRG00000001573	PATZ1	100	99.418	ENSCHIG00000020203	PATZ1	100	99.418	Capra_hircus
ENSPPRG00000001573	PATZ1	100	99.272	ENSTSYG00000033183	PATZ1	100	99.272	Carlito_syrichta
ENSPPRG00000001573	PATZ1	100	99.376	ENSCCAG00000028772	PATZ1	100	99.376	Cebus_capucinus
ENSPPRG00000001573	PATZ1	100	99.376	ENSCATG00000006101	PATZ1	100	99.376	Cercocebus_atys
ENSPPRG00000001573	PATZ1	100	89.275	ENSCPBG00000011277	PATZ1	100	88.261	Chrysemys_picta_bellii
ENSPPRG00000001573	PATZ1	100	99.376	ENSCANG00000024972	PATZ1	100	99.376	Colobus_angolensis_palliatus
ENSPPRG00000001573	PATZ1	100	97.089	ENSCGRG00001004071	Patz1	100	97.089	Cricetulus_griseus_chok1gshd
ENSPPRG00000001573	PATZ1	93	97.823	ENSCGRG00000004814	Patz1	100	97.823	Cricetulus_griseus_crigri
ENSPPRG00000001573	PATZ1	100	54.965	ENSCSEG00000001385	patz1	100	55.000	Cynoglossus_semilaevis
ENSPPRG00000001573	PATZ1	100	58.997	ENSCVAG00000007684	patz1	100	58.789	Cyprinodon_variegatus
ENSPPRG00000001573	PATZ1	97	60.679	ENSDARG00000076584	patz1	98	58.967	Danio_rerio
ENSPPRG00000001573	PATZ1	90	99.354	ENSDNOG00000003183	PATZ1	100	99.354	Dasypus_novemcinctus
ENSPPRG00000001573	PATZ1	100	99.709	ENSDORG00000023834	Patz1	100	99.709	Dipodomys_ordii
ENSPPRG00000001573	PATZ1	100	99.563	ENSECAG00000025030	PATZ1	100	99.563	Equus_caballus
ENSPPRG00000001573	PATZ1	99	62.075	ENSELUG00000002333	patz1	100	60.139	Esox_lucius
ENSPPRG00000001573	PATZ1	100	100.000	ENSFCAG00000030253	PATZ1	100	100.000	Felis_catus
ENSPPRG00000001573	PATZ1	86	92.034	ENSFALG00000007450	PATZ1	99	91.141	Ficedula_albicollis
ENSPPRG00000001573	PATZ1	96	97.856	ENSFDAG00000005614	PATZ1	100	97.856	Fukomys_damarensis
ENSPPRG00000001573	PATZ1	100	57.625	ENSFHEG00000014755	patz1	100	57.625	Fundulus_heteroclitus
ENSPPRG00000001573	PATZ1	98	55.230	ENSGMOG00000001062	patz1	98	54.848	Gadus_morhua
ENSPPRG00000001573	PATZ1	100	88.921	ENSGALG00000006934	PATZ1	100	88.201	Gallus_gallus
ENSPPRG00000001573	PATZ1	100	58.721	ENSGAFG00000010053	patz1	100	57.856	Gambusia_affinis
ENSPPRG00000001573	PATZ1	85	92.110	ENSGAGG00000003214	PATZ1	100	91.081	Gopherus_agassizii
ENSPPRG00000001573	PATZ1	100	99.532	ENSGGOG00000017171	PATZ1	100	99.532	Gorilla_gorilla
ENSPPRG00000001573	PATZ1	98	62.846	ENSHCOG00000017644	patz1	93	57.988	Hippocampus_comes
ENSPPRG00000001573	PATZ1	97	60.285	ENSIPUG00000017653	patz1	97	59.756	Ictalurus_punctatus
ENSPPRG00000001573	PATZ1	100	99.688	ENSSTOG00000020707	PATZ1	100	99.688	Ictidomys_tridecemlineatus
ENSPPRG00000001573	PATZ1	100	96.952	ENSJJAG00000015259	Patz1	100	96.952	Jaculus_jaculus
ENSPPRG00000001573	PATZ1	100	57.528	ENSKMAG00000008157	patz1	100	57.486	Kryptolebias_marmoratus
ENSPPRG00000001573	PATZ1	100	98.981	ENSLAFG00000002317	PATZ1	100	98.981	Loxodonta_africana
ENSPPRG00000001573	PATZ1	100	99.220	ENSMFAG00000040968	PATZ1	100	99.220	Macaca_fascicularis
ENSPPRG00000001573	PATZ1	100	99.220	ENSMNEG00000037588	PATZ1	100	99.220	Macaca_nemestrina
ENSPPRG00000001573	PATZ1	100	99.376	ENSMLEG00000030938	PATZ1	100	99.376	Mandrillus_leucophaeus
ENSPPRG00000001573	PATZ1	100	57.478	ENSMAMG00000023652	patz1	100	57.625	Mastacembelus_armatus
ENSPPRG00000001573	PATZ1	85	88.205	ENSMGAG00000008439	PATZ1	100	87.179	Meleagris_gallopavo
ENSPPRG00000001573	PATZ1	100	98.908	ENSMAUG00000004129	Patz1	100	98.908	Mesocricetus_auratus
ENSPPRG00000001573	PATZ1	100	99.272	ENSMICG00000005430	PATZ1	100	99.272	Microcebus_murinus
ENSPPRG00000001573	PATZ1	100	98.752	ENSMOCG00000014488	Patz1	100	98.752	Microtus_ochrogaster
ENSPPRG00000001573	PATZ1	99	55.078	ENSMMOG00000021679	patz1	100	54.513	Mola_mola
ENSPPRG00000001573	PATZ1	100	57.143	ENSMALG00000021172	patz1	100	56.719	Monopterus_albus
ENSPPRG00000001573	PATZ1	100	98.752	MGP_CAROLIEiJ_G0016007	Patz1	100	98.752	Mus_caroli
ENSPPRG00000001573	PATZ1	100	98.908	ENSMUSG00000020453	Patz1	100	98.908	Mus_musculus
ENSPPRG00000001573	PATZ1	100	98.908	MGP_PahariEiJ_G0016884	Patz1	100	98.908	Mus_pahari
ENSPPRG00000001573	PATZ1	100	98.908	MGP_SPRETEiJ_G0016846	Patz1	100	98.908	Mus_spretus
ENSPPRG00000001573	PATZ1	100	99.709	ENSMLUG00000009942	PATZ1	100	99.709	Myotis_lucifugus
ENSPPRG00000001573	PATZ1	100	99.220	ENSNGAG00000010268	Patz1	100	99.220	Nannospalax_galili
ENSPPRG00000001573	PATZ1	100	60.039	ENSNBRG00000016032	patz1	100	59.768	Neolamprologus_brichardi
ENSPPRG00000001573	PATZ1	68	94.194	ENSMEUG00000016293	PATZ1	99	94.181	Notamacropus_eugenii
ENSPPRG00000001573	PATZ1	100	98.836	ENSODEG00000003589	PATZ1	100	98.836	Octodon_degus
ENSPPRG00000001573	PATZ1	100	58.772	ENSONIG00000004248	patz1	100	58.565	Oreochromis_niloticus
ENSPPRG00000001573	PATZ1	100	93.614	ENSOANG00000014654	PATZ1	100	93.904	Ornithorhynchus_anatinus
ENSPPRG00000001573	PATZ1	100	58.626	ENSORLG00020010937	patz1	100	58.473	Oryzias_latipes_hni
ENSPPRG00000001573	PATZ1	100	58.003	ENSORLG00015007396	patz1	100	57.856	Oryzias_latipes_hsok
ENSPPRG00000001573	PATZ1	100	57.312	ENSOMEG00000006636	patz1	100	57.312	Oryzias_melastigma
ENSPPRG00000001573	PATZ1	100	99.418	ENSOGAG00000027905	PATZ1	100	99.418	Otolemur_garnettii
ENSPPRG00000001573	PATZ1	100	99.532	ENSPPAG00000033227	PATZ1	100	99.532	Pan_paniscus
ENSPPRG00000001573	PATZ1	86	100.000	ENSPTIG00000007937	PATZ1	91	100.000	Panthera_tigris_altaica
ENSPPRG00000001573	PATZ1	100	99.532	ENSPTRG00000014268	PATZ1	100	99.532	Pan_troglodytes
ENSPPRG00000001573	PATZ1	100	99.376	ENSPANG00000006821	PATZ1	100	99.272	Papio_anubis
ENSPPRG00000001573	PATZ1	100	62.313	ENSPKIG00000019584	patz1	100	61.754	Paramormyrops_kingsleyae
ENSPPRG00000001573	PATZ1	58	95.960	ENSPSIG00000011562	-	100	96.286	Pelodiscus_sinensis
ENSPPRG00000001573	PATZ1	60	83.535	ENSPSIG00000016553	-	91	82.809	Pelodiscus_sinensis
ENSPPRG00000001573	PATZ1	100	56.882	ENSPMGG00000010196	patz1	100	56.882	Periophthalmus_magnuspinnatus
ENSPPRG00000001573	PATZ1	100	98.908	ENSPEMG00000005321	Patz1	100	98.908	Peromyscus_maniculatus_bairdii
ENSPPRG00000001573	PATZ1	100	57.478	ENSPLAG00000010425	patz1	100	57.625	Poecilia_latipinna
ENSPPRG00000001573	PATZ1	100	57.562	ENSPMEG00000000255	patz1	100	57.709	Poecilia_mexicana
ENSPPRG00000001573	PATZ1	100	56.906	ENSPREG00000002440	patz1	100	57.044	Poecilia_reticulata
ENSPPRG00000001573	PATZ1	100	99.127	ENSPPYG00000011732	PATZ1	100	99.127	Pongo_abelii
ENSPPRG00000001573	PATZ1	100	99.127	ENSPCOG00000019729	PATZ1	100	99.127	Propithecus_coquereli
ENSPPRG00000001573	PATZ1	100	99.854	ENSPVAG00000001749	PATZ1	100	99.854	Pteropus_vampyrus
ENSPPRG00000001573	PATZ1	100	59.244	ENSPNYG00000013542	patz1	100	59.046	Pundamilia_nyererei
ENSPPRG00000001573	PATZ1	84	60.292	ENSPNAG00000017222	patz1	99	58.599	Pygocentrus_nattereri
ENSPPRG00000001573	PATZ1	100	99.376	ENSRBIG00000044231	PATZ1	100	99.376	Rhinopithecus_bieti
ENSPPRG00000001573	PATZ1	100	99.376	ENSRROG00000037155	PATZ1	100	99.376	Rhinopithecus_roxellana
ENSPPRG00000001573	PATZ1	100	99.376	ENSSBOG00000003894	PATZ1	100	99.376	Saimiri_boliviensis_boliviensis
ENSPPRG00000001573	PATZ1	79	88.462	ENSSFOG00015013244	patz1	78	88.462	Scleropages_formosus
ENSPPRG00000001573	PATZ1	100	87.055	ENSSPUG00000015298	PATZ1	100	86.202	Sphenodon_punctatus
ENSPPRG00000001573	PATZ1	85	99.485	ENSSSCG00000010027	PATZ1	100	99.485	Sus_scrofa
ENSPPRG00000001573	PATZ1	100	58.069	ENSTRUG00000015366	patz1	100	59.417	Takifugu_rubripes
ENSPPRG00000001573	PATZ1	100	99.854	ENSTTRG00000010279	PATZ1	100	99.854	Tursiops_truncatus
ENSPPRG00000001573	PATZ1	100	100.000	ENSUAMG00000015014	PATZ1	100	100.000	Ursus_americanus
ENSPPRG00000001573	PATZ1	100	73.188	ENSXETG00000004190	patz1	100	72.464	Xenopus_tropicalis
ENSPPRG00000001573	PATZ1	100	57.856	ENSXMAG00000015531	patz1	100	58.003	Xiphophorus_maculatus