EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPRG00000001879 (Gene tree)
Gene ID: 109275459
Gene Symbol: SMARCA2
Alias: -
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 2
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Plus strand
Length: 174530 bases
Position: chrKV860314.1:13054546-13229075
Accession: 109275459
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000005942	ResIII	PF04851.15	2.2e-08	1	1
ENSPPRP00000005921	ResIII	PF04851.15	2.2e-08	1	1
ENSPPRP00000005942	BRK	PF07533.16	2.5e-17	1	1
ENSPPRP00000005921	BRK	PF07533.16	2.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000003618	SMARCA2-203	4725	XM_019463673	ENSPPRP00000005921	1574 (aa)	XP_019319218	UPI000904A925
ENSPPRT00000003606	SMARCA2-202	783	-	ENSPPRP00000005903	260 (aa)	-	UPI000DE7BE63
ENSPPRT00000003604	SMARCA2-201	837	-	ENSPPRP00000005901	278 (aa)	-	UPI00046B8809
ENSPPRT00000003639	SMARCA2-204	5596	XM_019463678	ENSPPRP00000005942	1556 (aa)	XP_019319223	UPI000904850A

Gene Model

Click here to download ENSPPRG00000001879's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000001879's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPRG00000001879	SMARCA2	96	76.388	ENSPPRG00000000064	SMARCA4	96	76.452

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000001879	SMARCA2	100	97.265	ENSG00000080503	SMARCA2	100	100.000	Homo_sapiens
ENSPPRG00000001879	SMARCA2	100	80.276	ENSAPOG00000002641	SMARCA2	97	81.416	Acanthochromis_polyacanthus
ENSPPRG00000001879	SMARCA2	81	99.609	ENSAMEG00000012325	SMARCA2	100	99.609	Ailuropoda_melanoleuca
ENSPPRG00000001879	SMARCA2	100	80.304	ENSACIG00000015607	SMARCA2	97	80.507	Amphilophus_citrinellus
ENSPPRG00000001879	SMARCA2	100	79.987	ENSAOCG00000009647	-	96	80.889	Amphiprion_ocellaris
ENSPPRG00000001879	SMARCA2	100	80.339	ENSAPEG00000007646	SMARCA2	96	81.057	Amphiprion_percula
ENSPPRG00000001879	SMARCA2	99	81.007	ENSATEG00000006916	SMARCA2	95	80.937	Anabas_testudineus
ENSPPRG00000001879	SMARCA2	89	90.163	ENSAPLG00000013873	SMARCA2	94	89.316	Anas_platyrhynchos
ENSPPRG00000001879	SMARCA2	100	90.787	ENSACAG00000002423	SMARCA2	100	90.275	Anolis_carolinensis
ENSPPRG00000001879	SMARCA2	100	97.580	ENSANAG00000026498	SMARCA2	100	97.580	Aotus_nancymaae
ENSPPRG00000001879	SMARCA2	100	81.749	ENSACLG00000004248	SMARCA2	97	82.187	Astatotilapia_calliptera
ENSPPRG00000001879	SMARCA2	100	82.382	ENSAMXG00000012404	smarca2	97	83.005	Astyanax_mexicanus
ENSPPRG00000001879	SMARCA2	100	98.329	ENSBTAG00000007494	SMARCA2	100	98.329	Bos_taurus
ENSPPRG00000001879	SMARCA2	99	97.502	ENSCJAG00000010710	SMARCA2	99	97.290	Callithrix_jacchus
ENSPPRG00000001879	SMARCA2	100	99.365	ENSCAFG00000002013	SMARCA2	100	99.365	Canis_familiaris
ENSPPRG00000001879	SMARCA2	78	94.906	ENSCAFG00020026802	SMARCA2	98	94.906	Canis_lupus_dingo
ENSPPRG00000001879	SMARCA2	100	98.329	ENSCHIG00000025863	SMARCA2	100	98.329	Capra_hircus
ENSPPRG00000001879	SMARCA2	100	96.429	ENSTSYG00000003858	SMARCA2	100	96.429	Carlito_syrichta
ENSPPRG00000001879	SMARCA2	99	92.581	ENSCAPG00000002890	SMARCA2	99	92.474	Cavia_aperea
ENSPPRG00000001879	SMARCA2	100	95.860	ENSCPOG00000005475	SMARCA2	100	95.732	Cavia_porcellus
ENSPPRG00000001879	SMARCA2	100	97.518	ENSCCAG00000030636	SMARCA2	100	97.518	Cebus_capucinus
ENSPPRG00000001879	SMARCA2	100	97.323	ENSCATG00000031470	SMARCA2	100	97.323	Cercocebus_atys
ENSPPRG00000001879	SMARCA2	100	96.127	ENSCLAG00000014484	SMARCA2	100	95.937	Chinchilla_lanigera
ENSPPRG00000001879	SMARCA2	93	97.747	ENSCSAG00000008650	SMARCA2	99	97.747	Chlorocebus_sabaeus
ENSPPRG00000001879	SMARCA2	87	93.576	ENSCHOG00000004316	SMARCA2	87	93.576	Choloepus_hoffmanni
ENSPPRG00000001879	SMARCA2	97	94.962	ENSCPBG00000025463	SMARCA2	100	91.075	Chrysemys_picta_bellii
ENSPPRG00000001879	SMARCA2	100	97.766	ENSCANG00000039597	SMARCA2	100	97.766	Colobus_angolensis_palliatus
ENSPPRG00000001879	SMARCA2	100	88.616	ENSCGRG00001002323	Smarca2	100	88.575	Cricetulus_griseus_chok1gshd
ENSPPRG00000001879	SMARCA2	99	78.050	ENSCSEG00000019311	SMARCA2	96	78.123	Cynoglossus_semilaevis
ENSPPRG00000001879	SMARCA2	84	78.943	ENSCVAG00000016571	SMARCA2	95	79.815	Cyprinodon_variegatus
ENSPPRG00000001879	SMARCA2	100	82.491	ENSDARG00000008904	smarca2	97	82.521	Danio_rerio
ENSPPRG00000001879	SMARCA2	100	96.707	ENSDNOG00000006402	SMARCA2	100	96.707	Dasypus_novemcinctus
ENSPPRG00000001879	SMARCA2	100	96.628	ENSDORG00000014832	Smarca2	100	96.628	Dipodomys_ordii
ENSPPRG00000001879	SMARCA2	81	60.170	FBgn0000212	brm	86	56.194	Drosophila_melanogaster
ENSPPRG00000001879	SMARCA2	94	71.631	ENSEBUG00000011442	-	94	71.006	Eptatretus_burgeri
ENSPPRG00000001879	SMARCA2	86	62.832	ENSEBUG00000002449	-	95	64.327	Eptatretus_burgeri
ENSPPRG00000001879	SMARCA2	100	98.587	ENSEASG00005010312	SMARCA2	100	98.587	Equus_asinus_asinus
ENSPPRG00000001879	SMARCA2	67	98.611	ENSEEUG00000015540	-	72	95.349	Erinaceus_europaeus
ENSPPRG00000001879	SMARCA2	92	81.007	ENSELUG00000010318	smarca2	96	79.598	Esox_lucius
ENSPPRG00000001879	SMARCA2	100	99.873	ENSFCAG00000001568	SMARCA2	100	99.873	Felis_catus
ENSPPRG00000001879	SMARCA2	100	91.921	ENSFALG00000010416	SMARCA2	100	92.603	Ficedula_albicollis
ENSPPRG00000001879	SMARCA2	99	95.184	ENSFDAG00000010502	SMARCA2	99	94.335	Fukomys_damarensis
ENSPPRG00000001879	SMARCA2	100	80.895	ENSFHEG00000021250	SMARCA2	97	80.466	Fundulus_heteroclitus
ENSPPRG00000001879	SMARCA2	98	77.771	ENSGMOG00000014229	SMARCA2	97	79.192	Gadus_morhua
ENSPPRG00000001879	SMARCA2	100	92.621	ENSGALG00000010164	SMARCA2	100	91.921	Gallus_gallus
ENSPPRG00000001879	SMARCA2	95	76.263	ENSGAFG00000001164	SMARCA2	89	96.667	Gambusia_affinis
ENSPPRG00000001879	SMARCA2	99	79.694	ENSGACG00000014488	SMARCA2	97	78.849	Gasterosteus_aculeatus
ENSPPRG00000001879	SMARCA2	100	91.858	ENSGAGG00000024412	SMARCA2	100	91.603	Gopherus_agassizii
ENSPPRG00000001879	SMARCA2	100	92.988	ENSGGOG00000000513	SMARCA2	100	93.178	Gorilla_gorilla
ENSPPRG00000001879	SMARCA2	99	81.836	ENSHBUG00000006691	SMARCA2	97	80.371	Haplochromis_burtoni
ENSPPRG00000001879	SMARCA2	99	94.968	ENSHGLG00000005215	SMARCA2	99	94.965	Heterocephalus_glaber_female
ENSPPRG00000001879	SMARCA2	100	96.211	ENSHGLG00100010496	SMARCA2	100	95.954	Heterocephalus_glaber_male
ENSPPRG00000001879	SMARCA2	89	75.862	ENSHCOG00000015348	-	88	86.436	Hippocampus_comes
ENSPPRG00000001879	SMARCA2	100	80.581	ENSIPUG00000011060	smarca2	96	81.518	Ictalurus_punctatus
ENSPPRG00000001879	SMARCA2	100	96.696	ENSSTOG00000006812	SMARCA2	100	96.696	Ictidomys_tridecemlineatus
ENSPPRG00000001879	SMARCA2	100	96.817	ENSJJAG00000010867	Smarca2	100	96.817	Jaculus_jaculus
ENSPPRG00000001879	SMARCA2	100	79.490	ENSKMAG00000015844	-	98	79.541	Kryptolebias_marmoratus
ENSPPRG00000001879	SMARCA2	98	83.887	ENSLOCG00000011499	smarca2	97	83.493	Lepisosteus_oculatus
ENSPPRG00000001879	SMARCA2	100	95.768	ENSLAFG00000014061	SMARCA2	100	95.768	Loxodonta_africana
ENSPPRG00000001879	SMARCA2	100	96.028	ENSMFAG00000003814	SMARCA2	100	96.028	Macaca_fascicularis
ENSPPRG00000001879	SMARCA2	100	97.704	ENSMMUG00000015279	SMARCA2	100	97.704	Macaca_mulatta
ENSPPRG00000001879	SMARCA2	100	97.070	ENSMNEG00000041069	SMARCA2	100	97.070	Macaca_nemestrina
ENSPPRG00000001879	SMARCA2	100	94.890	ENSMLEG00000027418	SMARCA2	100	94.890	Mandrillus_leucophaeus
ENSPPRG00000001879	SMARCA2	100	80.236	ENSMAMG00000003056	SMARCA2	97	81.952	Mastacembelus_armatus
ENSPPRG00000001879	SMARCA2	99	81.995	ENSMZEG00005020709	SMARCA2	97	80.525	Maylandia_zebra
ENSPPRG00000001879	SMARCA2	76	77.556	ENSMGAG00000005160	-	100	77.424	Meleagris_gallopavo
ENSPPRG00000001879	SMARCA2	100	97.764	ENSMICG00000005162	SMARCA2	100	97.764	Microcebus_murinus
ENSPPRG00000001879	SMARCA2	100	95.865	ENSMOCG00000001611	Smarca2	100	95.674	Microtus_ochrogaster
ENSPPRG00000001879	SMARCA2	99	78.686	ENSMMOG00000014196	SMARCA2	96	77.953	Mola_mola
ENSPPRG00000001879	SMARCA2	100	93.333	ENSMODG00000003578	SMARCA2	100	93.082	Monodelphis_domestica
ENSPPRG00000001879	SMARCA2	99	81.518	ENSMALG00000009611	SMARCA2	96	81.316	Monopterus_albus
ENSPPRG00000001879	SMARCA2	100	95.455	MGP_CAROLIEiJ_G0022841	Smarca2	100	95.480	Mus_caroli
ENSPPRG00000001879	SMARCA2	100	95.009	ENSMUSG00000024921	Smarca2	99	99.441	Mus_musculus
ENSPPRG00000001879	SMARCA2	100	95.377	MGP_PahariEiJ_G0014334	Smarca2	100	95.377	Mus_pahari
ENSPPRG00000001879	SMARCA2	100	94.760	MGP_SPRETEiJ_G0023759	Smarca2	100	94.823	Mus_spretus
ENSPPRG00000001879	SMARCA2	81	99.532	ENSMPUG00000005171	SMARCA2	94	99.532	Mustela_putorius_furo
ENSPPRG00000001879	SMARCA2	99	91.389	ENSMLUG00000002342	SMARCA2	99	91.266	Myotis_lucifugus
ENSPPRG00000001879	SMARCA2	99	95.440	ENSNGAG00000000108	Smarca2	99	95.440	Nannospalax_galili
ENSPPRG00000001879	SMARCA2	95	68.679	ENSNBRG00000017998	SMARCA2	94	83.085	Neolamprologus_brichardi
ENSPPRG00000001879	SMARCA2	100	94.444	ENSNLEG00000008575	SMARCA2	100	94.381	Nomascus_leucogenys
ENSPPRG00000001879	SMARCA2	100	86.531	ENSMEUG00000009812	SMARCA2	100	86.277	Notamacropus_eugenii
ENSPPRG00000001879	SMARCA2	100	90.621	ENSOPRG00000013474	SMARCA2	100	90.558	Ochotona_princeps
ENSPPRG00000001879	SMARCA2	99	94.542	ENSODEG00000005452	SMARCA2	98	94.940	Octodon_degus
ENSPPRG00000001879	SMARCA2	99	80.517	ENSONIG00000014163	SMARCA2	96	80.206	Oreochromis_niloticus
ENSPPRG00000001879	SMARCA2	50	94.352	ENSOANG00000008299	-	95	98.113	Ornithorhynchus_anatinus
ENSPPRG00000001879	SMARCA2	100	96.453	ENSOCUG00000006320	SMARCA2	100	96.453	Oryctolagus_cuniculus
ENSPPRG00000001879	SMARCA2	100	79.224	ENSORLG00000020820	SMARCA2	100	79.185	Oryzias_latipes
ENSPPRG00000001879	SMARCA2	100	79.336	ENSORLG00015006289	SMARCA2	99	79.886	Oryzias_latipes_hsok
ENSPPRG00000001879	SMARCA2	99	81.270	ENSOMEG00000009736	-	96	81.130	Oryzias_melastigma
ENSPPRG00000001879	SMARCA2	99	93.789	ENSOGAG00000017053	SMARCA2	99	94.536	Otolemur_garnettii
ENSPPRG00000001879	SMARCA2	100	96.729	ENSOARG00000013265	SMARCA2	100	96.729	Ovis_aries
ENSPPRG00000001879	SMARCA2	100	92.912	ENSPPAG00000038717	SMARCA2	100	94.409	Pan_paniscus
ENSPPRG00000001879	SMARCA2	100	95.889	ENSPTRG00000051168	SMARCA2	100	95.889	Pan_troglodytes
ENSPPRG00000001879	SMARCA2	100	90.314	ENSPANG00000025121	SMARCA2	100	90.327	Papio_anubis
ENSPPRG00000001879	SMARCA2	100	83.825	ENSPKIG00000018469	-	100	83.301	Paramormyrops_kingsleyae
ENSPPRG00000001879	SMARCA2	100	91.365	ENSPSIG00000006284	SMARCA2	100	90.590	Pelodiscus_sinensis
ENSPPRG00000001879	SMARCA2	98	75.242	ENSPMGG00000013696	-	96	75.711	Periophthalmus_magnuspinnatus
ENSPPRG00000001879	SMARCA2	100	95.101	ENSPEMG00000019821	Smarca2	100	95.038	Peromyscus_maniculatus_bairdii
ENSPPRG00000001879	SMARCA2	94	73.248	ENSPMAG00000005337	-	94	72.482	Petromyzon_marinus
ENSPPRG00000001879	SMARCA2	100	94.987	ENSPCIG00000015658	SMARCA2	100	94.730	Phascolarctos_cinereus
ENSPPRG00000001879	SMARCA2	100	79.812	ENSPFOG00000001856	SMARCA2	97	78.967	Poecilia_formosa
ENSPPRG00000001879	SMARCA2	99	79.773	ENSPLAG00000017829	SMARCA2	95	78.193	Poecilia_latipinna
ENSPPRG00000001879	SMARCA2	99	79.823	ENSPMEG00000001815	-	97	76.705	Poecilia_mexicana
ENSPPRG00000001879	SMARCA2	100	79.379	ENSPREG00000013800	SMARCA2	95	78.054	Poecilia_reticulata
ENSPPRG00000001879	SMARCA2	100	97.130	ENSPPYG00000019258	SMARCA2	100	97.130	Pongo_abelii
ENSPPRG00000001879	SMARCA2	79	85.714	ENSPCAG00000016969	SMARCA2	78	85.714	Procavia_capensis
ENSPPRG00000001879	SMARCA2	100	95.652	ENSPCOG00000025709	SMARCA2	100	95.649	Propithecus_coquereli
ENSPPRG00000001879	SMARCA2	91	98.421	ENSPVAG00000000901	SMARCA2	95	98.421	Pteropus_vampyrus
ENSPPRG00000001879	SMARCA2	100	78.129	ENSPNYG00000004533	SMARCA2	97	77.821	Pundamilia_nyererei
ENSPPRG00000001879	SMARCA2	99	83.685	ENSPNAG00000014635	smarca2	95	83.596	Pygocentrus_nattereri
ENSPPRG00000001879	SMARCA2	100	95.116	ENSRNOG00000011931	Smarca2	100	95.116	Rattus_norvegicus
ENSPPRG00000001879	SMARCA2	100	95.405	ENSRBIG00000038618	SMARCA2	100	95.405	Rhinopithecus_bieti
ENSPPRG00000001879	SMARCA2	100	96.530	ENSRROG00000019271	SMARCA2	100	96.530	Rhinopithecus_roxellana
ENSPPRG00000001879	SMARCA2	100	94.917	ENSSBOG00000034827	SMARCA2	100	94.917	Saimiri_boliviensis_boliviensis
ENSPPRG00000001879	SMARCA2	100	93.639	ENSSHAG00000007884	SMARCA2	100	92.327	Sarcophilus_harrisii
ENSPPRG00000001879	SMARCA2	91	84.844	ENSSFOG00015014870	SMARCA2	97	86.065	Scleropages_formosus
ENSPPRG00000001879	SMARCA2	100	80.989	ENSSMAG00000013707	SMARCA2	97	81.079	Scophthalmus_maximus
ENSPPRG00000001879	SMARCA2	99	80.784	ENSSDUG00000008852	-	98	78.759	Seriola_dumerili
ENSPPRG00000001879	SMARCA2	99	79.014	ENSSLDG00000025449	SMARCA2	96	79.804	Seriola_lalandi_dorsalis
ENSPPRG00000001879	SMARCA2	95	97.126	ENSSARG00000007888	SMARCA2	95	96.842	Sorex_araneus
ENSPPRG00000001879	SMARCA2	98	84.981	ENSSPUG00000001629	SMARCA2	98	87.005	Sphenodon_punctatus
ENSPPRG00000001879	SMARCA2	100	80.388	ENSSPAG00000020091	-	97	79.974	Stegastes_partitus
ENSPPRG00000001879	SMARCA2	100	98.266	ENSSSCG00000005232	SMARCA2	100	98.266	Sus_scrofa
ENSPPRG00000001879	SMARCA2	100	90.649	ENSTGUG00000005460	SMARCA2	100	90.585	Taeniopygia_guttata
ENSPPRG00000001879	SMARCA2	99	79.267	ENSTRUG00000015619	SMARCA2	96	80.247	Takifugu_rubripes
ENSPPRG00000001879	SMARCA2	67	100.000	ENSTBEG00000008767	SMARCA2	74	100.000	Tupaia_belangeri
ENSPPRG00000001879	SMARCA2	100	94.667	ENSTTRG00000002033	SMARCA2	100	94.667	Tursiops_truncatus
ENSPPRG00000001879	SMARCA2	89	96.963	ENSUAMG00000024701	SMARCA2	99	96.965	Ursus_americanus
ENSPPRG00000001879	SMARCA2	91	88.643	ENSVPAG00000001204	SMARCA2	100	88.643	Vicugna_pacos
ENSPPRG00000001879	SMARCA2	77	95.913	ENSVVUG00000004598	SMARCA2	99	95.913	Vulpes_vulpes
ENSPPRG00000001879	SMARCA2	100	83.665	ENSXETG00000015299	smarca2	100	83.043	Xenopus_tropicalis
ENSPPRG00000001879	SMARCA2	89	79.111	ENSXCOG00000011073	SMARCA2	97	78.959	Xiphophorus_couchianus
ENSPPRG00000001879	SMARCA2	100	79.169	ENSXMAG00000015611	SMARCA2	95	78.530	Xiphophorus_maculatus