EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPRG00000002116 (Gene tree)
Gene ID: 109271967
Gene Symbol: PRPF38B
Alias: -
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Plus strand
Length: 9045 bases
Position: chrKV860303.1:13794591-13803635
Accession: 109271967
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000006775	PRP38	PF03371.15	1.7e-57	1	1
ENSPPRP00000006782	PRP38	PF03371.15	8e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000004524	PRPF38B-202	3085	XM_019457694	ENSPPRP00000006775	549 (aa)	XP_019313239	UPI0009052CFF
ENSPPRT00000004515	PRPF38B-201	579	-	ENSPPRP00000006782	192 (aa)	-	-

Gene Model

Click here to download ENSPPRG00000002116's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000002116's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000002116	PRPF38B	100	98.438	ENSG00000134186	PRPF38B	100	98.438	Homo_sapiens
ENSPPRG00000002116	PRPF38B	100	98.438	ENSANAG00000028333	PRPF38B	100	98.438	Aotus_nancymaae
ENSPPRG00000002116	PRPF38B	98	95.288	ENSCGRG00001018841	Prpf38b	100	90.000	Cricetulus_griseus_chok1gshd
ENSPPRG00000002116	PRPF38B	83	89.231	ENSCGRG00000002972	Prpf38b	100	90.549	Cricetulus_griseus_crigri
ENSPPRG00000002116	PRPF38B	79	91.743	ENSDORG00000025236	-	97	94.550	Dipodomys_ordii
ENSPPRG00000002116	PRPF38B	75	90.972	ENSEBUG00000001683	-	58	73.134	Eptatretus_burgeri
ENSPPRG00000002116	PRPF38B	100	94.353	ENSEEUG00000014328	PRPF38B	100	91.985	Erinaceus_europaeus
ENSPPRG00000002116	PRPF38B	100	95.628	ENSFDAG00000021009	PRPF38B	100	95.628	Fukomys_damarensis
ENSPPRG00000002116	PRPF38B	100	98.438	ENSGGOG00000011288	PRPF38B	100	98.438	Gorilla_gorilla
ENSPPRG00000002116	PRPF38B	91	89.178	ENSMGAG00000006188	PRPF38B	100	89.980	Meleagris_gallopavo
ENSPPRG00000002116	PRPF38B	98	97.354	ENSMAUG00000019131	Prpf38b	100	89.982	Mesocricetus_auratus
ENSPPRG00000002116	PRPF38B	98	97.872	MGP_CAROLIEiJ_G0025542	Prpf38b	99	95.745	Mus_caroli
ENSPPRG00000002116	PRPF38B	98	97.354	ENSMUSG00000027881	Prpf38b	99	94.737	Mus_musculus
ENSPPRG00000002116	PRPF38B	98	97.354	MGP_PahariEiJ_G0026988	Prpf38b	99	94.737	Mus_pahari
ENSPPRG00000002116	PRPF38B	98	97.354	MGP_SPRETEiJ_G0026492	Prpf38b	99	94.737	Mus_spretus
ENSPPRG00000002116	PRPF38B	100	97.409	ENSNLEG00000001645	-	100	97.409	Nomascus_leucogenys
ENSPPRG00000002116	PRPF38B	100	88.525	ENSNLEG00000030268	-	100	89.982	Nomascus_leucogenys
ENSPPRG00000002116	PRPF38B	100	98.361	ENSPPAG00000001260	PRPF38B	100	98.361	Pan_paniscus
ENSPPRG00000002116	PRPF38B	100	98.438	ENSPTRG00000001032	PRPF38B	100	98.438	Pan_troglodytes
ENSPPRG00000002116	PRPF38B	100	98.182	ENSPANG00000007560	PRPF38B	100	98.182	Papio_anubis
ENSPPRG00000002116	PRPF38B	98	96.859	ENSPCIG00000024841	PRPF38B	61	95.455	Phascolarctos_cinereus
ENSPPRG00000002116	PRPF38B	100	98.361	ENSPVAG00000011929	-	100	98.361	Pteropus_vampyrus
ENSPPRG00000002116	PRPF38B	100	96.920	ENSSARG00000012818	-	100	96.920	Sorex_araneus
ENSPPRG00000002116	PRPF38B	98	86.387	ENSTGUG00000004594	-	71	89.362	Taeniopygia_guttata
ENSPPRG00000002116	PRPF38B	100	99.089	ENSUAMG00000023817	PRPF38B	100	99.089	Ursus_americanus