EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPRG00000002471 (Gene tree)
Gene ID: 109273479
Gene Symbol: BLM
Alias: -
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Minus strand
Length: 60840 bases
Position: chrKV860307.1:18212976-18273815
Accession: 109273479
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000007220	HRDC	PF00570.23	9.3e-12	1	1
ENSPPRP00000007208	BDHCT	PF08072.11	8.7e-21	1	1
ENSPPRP00000007220	BDHCT	PF08072.11	1e-20	1	1
ENSPPRP00000007208	DEAD	PF00270.29	1.3e-19	1	1
ENSPPRP00000007220	DEAD	PF00270.29	1.3e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000004981	BLM-202	4248	XM_019460327	ENSPPRP00000007220	1415 (aa)	XP_019315872	-
ENSPPRT00000004973	BLM-201	3855	-	ENSPPRP00000007208	1284 (aa)	-	-

Gene Model

Click here to download ENSPPRG00000002471's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000002471's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000002471	BLM	100	81.338	ENSG00000197299	BLM	100	81.338	Homo_sapiens
ENSPPRG00000002471	BLM	59	72.951	ENSAPOG00000017966	blm	66	64.586	Acanthochromis_polyacanthus
ENSPPRG00000002471	BLM	100	85.986	ENSAMEG00000013843	BLM	100	85.986	Ailuropoda_melanoleuca
ENSPPRG00000002471	BLM	59	73.608	ENSACIG00000023762	blm	64	64.394	Amphilophus_citrinellus
ENSPPRG00000002471	BLM	60	72.746	ENSAOCG00000003318	blm	65	64.758	Amphiprion_ocellaris
ENSPPRG00000002471	BLM	60	72.541	ENSAPEG00000018105	blm	64	64.758	Amphiprion_percula
ENSPPRG00000002471	BLM	82	73.975	ENSATEG00000006421	blm	84	65.949	Anabas_testudineus
ENSPPRG00000002471	BLM	80	57.961	ENSAPLG00000006878	BLM	97	57.420	Anas_platyrhynchos
ENSPPRG00000002471	BLM	59	80.000	ENSACAG00000014275	BLM	99	49.529	Anolis_carolinensis
ENSPPRG00000002471	BLM	100	80.677	ENSANAG00000038415	BLM	100	80.748	Aotus_nancymaae
ENSPPRG00000002471	BLM	82	74.433	ENSACLG00000020354	blm	75	74.433	Astatotilapia_calliptera
ENSPPRG00000002471	BLM	55	64.968	ENSAMXG00000016970	blm	59	62.109	Astyanax_mexicanus
ENSPPRG00000002471	BLM	93	85.855	ENSBTAG00000020301	BLM	100	85.855	Bos_taurus
ENSPPRG00000002471	BLM	100	80.000	ENSCJAG00000009803	BLM	100	80.070	Callithrix_jacchus
ENSPPRG00000002471	BLM	100	86.228	ENSCAFG00000012385	BLM	100	86.088	Canis_familiaris
ENSPPRG00000002471	BLM	100	86.228	ENSCAFG00020016111	BLM	94	95.486	Canis_lupus_dingo
ENSPPRG00000002471	BLM	100	82.523	ENSCHIG00000010329	BLM	100	85.526	Capra_hircus
ENSPPRG00000002471	BLM	100	79.803	ENSTSYG00000012368	BLM	100	79.803	Carlito_syrichta
ENSPPRG00000002471	BLM	86	85.057	ENSCAPG00000017976	BLM	99	85.057	Cavia_aperea
ENSPPRG00000002471	BLM	100	76.647	ENSCPOG00000001761	BLM	100	76.039	Cavia_porcellus
ENSPPRG00000002471	BLM	100	79.817	ENSCCAG00000023069	BLM	100	79.887	Cebus_capucinus
ENSPPRG00000002471	BLM	100	80.986	ENSCATG00000040609	BLM	92	94.879	Cercocebus_atys
ENSPPRG00000002471	BLM	100	76.972	ENSCLAG00000012111	BLM	100	77.183	Chinchilla_lanigera
ENSPPRG00000002471	BLM	100	80.729	ENSCSAG00000017040	BLM	100	80.729	Chlorocebus_sabaeus
ENSPPRG00000002471	BLM	87	96.124	ENSCHOG00000006255	BLM	80	96.124	Choloepus_hoffmanni
ENSPPRG00000002471	BLM	89	55.057	ENSCPBG00000025000	BLM	97	73.648	Chrysemys_picta_bellii
ENSPPRG00000002471	BLM	88	71.588	ENSCANG00000034808	BLM	100	72.227	Colobus_angolensis_palliatus
ENSPPRG00000002471	BLM	100	75.140	ENSCGRG00001024897	Blm	100	75.351	Cricetulus_griseus_chok1gshd
ENSPPRG00000002471	BLM	74	70.576	ENSCGRG00000016261	Blm	96	70.890	Cricetulus_griseus_crigri
ENSPPRG00000002471	BLM	71	72.784	ENSCSEG00000013483	blm	69	64.943	Cynoglossus_semilaevis
ENSPPRG00000002471	BLM	83	73.361	ENSDARG00000077089	blm	73	79.024	Danio_rerio
ENSPPRG00000002471	BLM	99	78.446	ENSDNOG00000010159	BLM	99	78.446	Dasypus_novemcinctus
ENSPPRG00000002471	BLM	74	81.644	ENSDORG00000011033	Blm	100	81.836	Dipodomys_ordii
ENSPPRG00000002471	BLM	50	42.527	FBgn0002906	Blm	52	41.065	Drosophila_melanogaster
ENSPPRG00000002471	BLM	85	85.714	ENSETEG00000015019	BLM	82	85.833	Echinops_telfairi
ENSPPRG00000002471	BLM	100	80.889	ENSEASG00005006727	BLM	100	81.100	Equus_asinus_asinus
ENSPPRG00000002471	BLM	100	82.600	ENSECAG00000011405	BLM	100	82.809	Equus_caballus
ENSPPRG00000002471	BLM	99	77.711	ENSEEUG00000001434	BLM	99	74.718	Erinaceus_europaeus
ENSPPRG00000002471	BLM	75	74.795	ENSELUG00000019098	blm	61	68.250	Esox_lucius
ENSPPRG00000002471	BLM	100	99.401	ENSFCAG00000006087	BLM	100	99.401	Felis_catus
ENSPPRG00000002471	BLM	89	51.541	ENSFALG00000010981	BLM	94	54.074	Ficedula_albicollis
ENSPPRG00000002471	BLM	100	78.443	ENSFDAG00000012658	BLM	100	69.818	Fukomys_damarensis
ENSPPRG00000002471	BLM	51	72.802	ENSFHEG00000002553	blm	57	64.803	Fundulus_heteroclitus
ENSPPRG00000002471	BLM	82	71.340	ENSGMOG00000016431	blm	90	60.764	Gadus_morhua
ENSPPRG00000002471	BLM	99	50.572	ENSGALG00000008256	BLM	87	68.298	Gallus_gallus
ENSPPRG00000002471	BLM	66	72.802	ENSGAFG00000001117	blm	74	64.623	Gambusia_affinis
ENSPPRG00000002471	BLM	60	73.361	ENSGACG00000010863	blm	100	72.779	Gasterosteus_aculeatus
ENSPPRG00000002471	BLM	88	52.135	ENSGAGG00000005383	BLM	91	77.398	Gopherus_agassizii
ENSPPRG00000002471	BLM	100	81.113	ENSGGOG00000007710	BLM	92	95.687	Gorilla_gorilla
ENSPPRG00000002471	BLM	82	74.433	ENSHBUG00000015943	blm	57	65.025	Haplochromis_burtoni
ENSPPRG00000002471	BLM	100	77.606	ENSHGLG00000013231	BLM	99	77.746	Heterocephalus_glaber_female
ENSPPRG00000002471	BLM	57	67.308	ENSHCOG00000011455	blm	83	61.848	Hippocampus_comes
ENSPPRG00000002471	BLM	74	53.429	ENSIPUG00000000529	blm	68	64.076	Ictalurus_punctatus
ENSPPRG00000002471	BLM	100	77.598	ENSSTOG00000005000	BLM	100	77.949	Ictidomys_tridecemlineatus
ENSPPRG00000002471	BLM	66	85.331	ENSJJAG00000016322	Blm	94	86.593	Jaculus_jaculus
ENSPPRG00000002471	BLM	50	73.566	ENSKMAG00000016608	blm	56	64.968	Kryptolebias_marmoratus
ENSPPRG00000002471	BLM	55	74.638	ENSLACG00000006490	BLM	58	67.138	Latimeria_chalumnae
ENSPPRG00000002471	BLM	86	68.124	ENSLOCG00000014302	blm	86	61.720	Lepisosteus_oculatus
ENSPPRG00000002471	BLM	100	80.986	ENSMFAG00000042982	BLM	92	95.418	Macaca_fascicularis
ENSPPRG00000002471	BLM	100	81.056	ENSMMUG00000019526	BLM	92	95.418	Macaca_mulatta
ENSPPRG00000002471	BLM	98	78.659	ENSMNEG00000031251	BLM	92	95.148	Macaca_nemestrina
ENSPPRG00000002471	BLM	100	78.732	ENSMLEG00000032934	BLM	100	78.732	Mandrillus_leucophaeus
ENSPPRG00000002471	BLM	60	74.795	ENSMAMG00000008726	blm	65	66.286	Mastacembelus_armatus
ENSPPRG00000002471	BLM	82	74.433	ENSMZEG00005022323	blm	62	64.975	Maylandia_zebra
ENSPPRG00000002471	BLM	100	75.105	ENSMAUG00000008953	Blm	99	75.105	Mesocricetus_auratus
ENSPPRG00000002471	BLM	100	80.098	ENSMICG00000034442	BLM	100	80.098	Microcebus_murinus
ENSPPRG00000002471	BLM	100	74.402	ENSMOCG00000016367	Blm	99	74.051	Microtus_ochrogaster
ENSPPRG00000002471	BLM	54	72.967	ENSMMOG00000006959	blm	57	64.691	Mola_mola
ENSPPRG00000002471	BLM	99	63.476	ENSMODG00000019449	BLM	99	63.476	Monodelphis_domestica
ENSPPRG00000002471	BLM	63	73.000	ENSMALG00000007323	blm	68	66.414	Monopterus_albus
ENSPPRG00000002471	BLM	100	73.039	MGP_CAROLIEiJ_G0029907	Blm	100	73.179	Mus_caroli
ENSPPRG00000002471	BLM	100	72.962	ENSMUSG00000030528	Blm	100	73.184	Mus_musculus
ENSPPRG00000002471	BLM	100	74.071	MGP_PahariEiJ_G0013129	Blm	100	73.791	Mus_pahari
ENSPPRG00000002471	BLM	100	73.529	MGP_SPRETEiJ_G0031009	Blm	100	73.249	Mus_spretus
ENSPPRG00000002471	BLM	87	82.865	ENSMPUG00000015657	BLM	99	83.402	Mustela_putorius_furo
ENSPPRG00000002471	BLM	100	79.003	ENSMLUG00000014697	BLM	100	79.424	Myotis_lucifugus
ENSPPRG00000002471	BLM	100	76.479	ENSNGAG00000001275	Blm	100	75.986	Nannospalax_galili
ENSPPRG00000002471	BLM	82	74.433	ENSNBRG00000019702	blm	56	64.975	Neolamprologus_brichardi
ENSPPRG00000002471	BLM	100	79.859	ENSNLEG00000012087	BLM	100	83.270	Nomascus_leucogenys
ENSPPRG00000002471	BLM	99	60.615	ENSMEUG00000007253	BLM	99	60.615	Notamacropus_eugenii
ENSPPRG00000002471	BLM	95	86.584	ENSOPRG00000011667	BLM	86	94.676	Ochotona_princeps
ENSPPRG00000002471	BLM	74	78.332	ENSODEG00000015373	BLM	100	78.332	Octodon_degus
ENSPPRG00000002471	BLM	86	68.015	ENSONIG00000015193	blm	59	61.294	Oreochromis_niloticus
ENSPPRG00000002471	BLM	54	83.203	ENSOANG00000009316	-	99	83.203	Ornithorhynchus_anatinus
ENSPPRG00000002471	BLM	99	73.803	ENSOCUG00000013969	BLM	99	73.803	Oryctolagus_cuniculus
ENSPPRG00000002471	BLM	60	73.361	ENSORLG00000008110	blm	64	65.729	Oryzias_latipes
ENSPPRG00000002471	BLM	60	73.361	ENSORLG00020004812	blm	64	65.857	Oryzias_latipes_hni
ENSPPRG00000002471	BLM	60	73.566	ENSORLG00015018640	blm	78	66.156	Oryzias_latipes_hsok
ENSPPRG00000002471	BLM	50	73.156	ENSOMEG00000023545	blm	57	73.156	Oryzias_melastigma
ENSPPRG00000002471	BLM	100	75.819	ENSOGAG00000005708	BLM	100	74.613	Otolemur_garnettii
ENSPPRG00000002471	BLM	100	84.431	ENSOARG00000012875	BLM	100	81.704	Ovis_aries
ENSPPRG00000002471	BLM	100	80.902	ENSPPAG00000032173	BLM	100	80.902	Pan_paniscus
ENSPPRG00000002471	BLM	100	98.843	ENSPTIG00000016168	BLM	100	98.800	Panthera_tigris_altaica
ENSPPRG00000002471	BLM	100	80.832	ENSPTRG00000007460	BLM	100	80.832	Pan_troglodytes
ENSPPRG00000002471	BLM	100	81.197	ENSPANG00000018572	BLM	92	95.148	Papio_anubis
ENSPPRG00000002471	BLM	87	69.301	ENSPKIG00000008954	blm	72	63.015	Paramormyrops_kingsleyae
ENSPPRG00000002471	BLM	51	66.759	ENSPMGG00000006629	blm	80	66.851	Periophthalmus_magnuspinnatus
ENSPPRG00000002471	BLM	100	75.211	ENSPEMG00000017348	Blm	100	75.140	Peromyscus_maniculatus_bairdii
ENSPPRG00000002471	BLM	50	58.683	ENSPMAG00000000445	blm	96	58.881	Petromyzon_marinus
ENSPPRG00000002471	BLM	99	63.029	ENSPCIG00000006609	BLM	99	63.029	Phascolarctos_cinereus
ENSPPRG00000002471	BLM	59	73.006	ENSPFOG00000005059	blm	84	64.834	Poecilia_formosa
ENSPPRG00000002471	BLM	59	73.006	ENSPMEG00000000321	blm	85	64.834	Poecilia_mexicana
ENSPPRG00000002471	BLM	100	79.577	ENSPPYG00000006784	BLM	100	79.577	Pongo_abelii
ENSPPRG00000002471	BLM	73	90.909	ENSPCAG00000008960	BLM	73	90.909	Procavia_capensis
ENSPPRG00000002471	BLM	100	78.443	ENSPCOG00000000439	BLM	100	78.443	Propithecus_coquereli
ENSPPRG00000002471	BLM	83	96.805	ENSPVAG00000011642	BLM	88	96.805	Pteropus_vampyrus
ENSPPRG00000002471	BLM	84	53.216	ENSPNYG00000010956	blm	53	53.216	Pundamilia_nyererei
ENSPPRG00000002471	BLM	54	69.944	ENSPNAG00000011714	blm	59	62.890	Pygocentrus_nattereri
ENSPPRG00000002471	BLM	100	72.925	ENSRNOG00000011213	Blm	100	72.714	Rattus_norvegicus
ENSPPRG00000002471	BLM	100	79.211	ENSRBIG00000029656	BLM	100	86.015	Rhinopithecus_bieti
ENSPPRG00000002471	BLM	100	80.493	ENSRROG00000037871	BLM	92	93.801	Rhinopithecus_roxellana
ENSPPRG00000002471	BLM	100	79.270	ENSSBOG00000030957	BLM	100	80.107	Saimiri_boliviensis_boliviensis
ENSPPRG00000002471	BLM	99	63.165	ENSSHAG00000007988	BLM	99	63.165	Sarcophilus_harrisii
ENSPPRG00000002471	BLM	50	73.499	ENSSFOG00015015462	blm	63	64.322	Scleropages_formosus
ENSPPRG00000002471	BLM	63	72.951	ENSSMAG00000001120	blm	68	65.228	Scophthalmus_maximus
ENSPPRG00000002471	BLM	82	73.770	ENSSDUG00000010955	blm	84	65.820	Seriola_dumerili
ENSPPRG00000002471	BLM	50	73.361	ENSSLDG00000000634	blm	84	65.057	Seriola_lalandi_dorsalis
ENSPPRG00000002471	BLM	94	70.659	ENSSARG00000006398	BLM	100	68.857	Sorex_araneus
ENSPPRG00000002471	BLM	74	58.168	ENSSPUG00000000013	BLM	96	55.614	Sphenodon_punctatus
ENSPPRG00000002471	BLM	54	72.746	ENSSPAG00000013999	blm	84	64.923	Stegastes_partitus
ENSPPRG00000002471	BLM	100	83.234	ENSSSCG00000001816	BLM	99	81.342	Sus_scrofa
ENSPPRG00000002471	BLM	77	55.156	ENSTGUG00000009959	-	99	50.943	Taeniopygia_guttata
ENSPPRG00000002471	BLM	79	50.517	ENSTRUG00000019860	blm	67	60.542	Takifugu_rubripes
ENSPPRG00000002471	BLM	72	72.746	ENSTNIG00000019246	blm	66	64.422	Tetraodon_nigroviridis
ENSPPRG00000002471	BLM	77	92.208	ENSTBEG00000006706	BLM	81	83.743	Tupaia_belangeri
ENSPPRG00000002471	BLM	100	85.030	ENSTTRG00000016386	BLM	100	83.169	Tursiops_truncatus
ENSPPRG00000002471	BLM	100	86.228	ENSUMAG00000009105	BLM	97	95.212	Ursus_maritimus
ENSPPRG00000002471	BLM	99	80.409	ENSVPAG00000000085	BLM	99	80.691	Vicugna_pacos
ENSPPRG00000002471	BLM	95	97.005	ENSVVUG00000006402	BLM	100	93.544	Vulpes_vulpes
ENSPPRG00000002471	BLM	99	50.341	ENSXETG00000007847	blm	50	82.609	Xenopus_tropicalis
ENSPPRG00000002471	BLM	50	67.280	ENSXCOG00000020227	blm	55	61.303	Xiphophorus_couchianus
ENSPPRG00000002471	BLM	50	72.188	ENSXMAG00000002951	blm	56	64.240	Xiphophorus_maculatus