EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPRG00000002509 (Gene tree)
Gene ID: 109274321
Gene Symbol: SRRM1
Alias: -
Full Name: serine and arginine repetitive matrix 1
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Plus strand
Length: 33321 bases
Position: chrKV860309.1:21137833-21171153
Accession: 109274321
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000007270	PWI	PF01480.17	6.5e-30	1	1
ENSPPRP00000007266	PWI	PF01480.17	6.5e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000005041	SRRM1-202	3564	XM_019461832	ENSPPRP00000007270	904 (aa)	XP_019317377	UPI0005AC700C
ENSPPRT00000005031	SRRM1-201	2742	XM_019461826	ENSPPRP00000007266	913 (aa)	XP_019317371	UPI000DE7CF4E

Gene Model

Click here to download ENSPPRG00000002509's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000002509's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000002509	SRRM1	100	98.451	ENSG00000133226	SRRM1	100	100.000	Homo_sapiens
ENSPPRG00000002509	SRRM1	100	99.343	ENSAMEG00000010075	SRRM1	100	99.343	Ailuropoda_melanoleuca
ENSPPRG00000002509	SRRM1	60	64.983	ENSAPLG00000002066	SRRM1	59	76.250	Anas_platyrhynchos
ENSPPRG00000002509	SRRM1	100	98.009	ENSANAG00000035606	SRRM1	100	98.009	Aotus_nancymaae
ENSPPRG00000002509	SRRM1	100	98.119	ENSBTAG00000013772	SRRM1	100	98.119	Bos_taurus
ENSPPRG00000002509	SRRM1	100	97.700	ENSCJAG00000020822	SRRM1	100	97.700	Callithrix_jacchus
ENSPPRG00000002509	SRRM1	88	89.950	ENSCAFG00020000003	-	98	89.950	Canis_lupus_dingo
ENSPPRG00000002509	SRRM1	100	99.336	ENSCAFG00020020948	SRRM1	100	99.336	Canis_lupus_dingo
ENSPPRG00000002509	SRRM1	100	96.725	ENSCHIG00000014656	SRRM1	100	96.725	Capra_hircus
ENSPPRG00000002509	SRRM1	100	98.230	ENSTSYG00000006782	SRRM1	100	98.230	Carlito_syrichta
ENSPPRG00000002509	SRRM1	99	94.537	ENSCAPG00000011473	SRRM1	100	94.537	Cavia_aperea
ENSPPRG00000002509	SRRM1	100	95.575	ENSCPOG00000015594	SRRM1	100	95.575	Cavia_porcellus
ENSPPRG00000002509	SRRM1	100	97.898	ENSCCAG00000029474	SRRM1	100	97.898	Cebus_capucinus
ENSPPRG00000002509	SRRM1	100	98.119	ENSCATG00000031303	SRRM1	100	98.119	Cercocebus_atys
ENSPPRG00000002509	SRRM1	100	96.350	ENSCLAG00000014592	SRRM1	100	96.350	Chinchilla_lanigera
ENSPPRG00000002509	SRRM1	74	97.778	ENSCHOG00000000027	SRRM1	73	99.155	Choloepus_hoffmanni
ENSPPRG00000002509	SRRM1	100	98.119	ENSCANG00000028271	SRRM1	100	98.119	Colobus_angolensis_palliatus
ENSPPRG00000002509	SRRM1	96	93.665	ENSDNOG00000049141	SRRM1	98	93.665	Dasypus_novemcinctus
ENSPPRG00000002509	SRRM1	100	97.059	ENSEASG00005004270	SRRM1	100	97.059	Equus_asinus_asinus
ENSPPRG00000002509	SRRM1	100	97.677	ENSECAG00000026981	SRRM1	100	97.677	Equus_caballus
ENSPPRG00000002509	SRRM1	100	100.000	ENSFCAG00000000678	-	100	100.000	Felis_catus
ENSPPRG00000002509	SRRM1	100	97.124	ENSFDAG00000009903	SRRM1	100	97.124	Fukomys_damarensis
ENSPPRG00000002509	SRRM1	100	98.341	ENSGGOG00000005209	SRRM1	100	98.341	Gorilla_gorilla
ENSPPRG00000002509	SRRM1	100	97.235	ENSHGLG00000017105	SRRM1	100	97.235	Heterocephalus_glaber_female
ENSPPRG00000002509	SRRM1	99	96.778	ENSHGLG00100016772	SRRM1	99	96.778	Heterocephalus_glaber_male
ENSPPRG00000002509	SRRM1	100	98.119	ENSSTOG00000014640	SRRM1	100	98.119	Ictidomys_tridecemlineatus
ENSPPRG00000002509	SRRM1	100	94.804	ENSLAFG00000013830	SRRM1	100	94.804	Loxodonta_africana
ENSPPRG00000002509	SRRM1	100	98.119	ENSMFAG00000025726	SRRM1	100	98.119	Macaca_fascicularis
ENSPPRG00000002509	SRRM1	86	78.333	ENSMFAG00000038841	-	61	79.276	Macaca_fascicularis
ENSPPRG00000002509	SRRM1	55	78.672	ENSMMUG00000039269	-	59	68.352	Macaca_mulatta
ENSPPRG00000002509	SRRM1	100	98.009	ENSMMUG00000006645	SRRM1	100	98.009	Macaca_mulatta
ENSPPRG00000002509	SRRM1	100	98.119	ENSMNEG00000039415	SRRM1	100	98.119	Macaca_nemestrina
ENSPPRG00000002509	SRRM1	59	69.776	ENSMLEG00000032221	-	58	74.798	Mandrillus_leucophaeus
ENSPPRG00000002509	SRRM1	55	98.403	ENSMLEG00000038030	-	100	91.895	Mandrillus_leucophaeus
ENSPPRG00000002509	SRRM1	100	98.009	ENSMICG00000006553	SRRM1	100	98.009	Microcebus_murinus
ENSPPRG00000002509	SRRM1	59	97.166	MGP_CAROLIEiJ_G0026636	Srrm1	100	85.965	Mus_caroli
ENSPPRG00000002509	SRRM1	59	97.166	ENSMUSG00000028809	Srrm1	100	85.965	Mus_musculus
ENSPPRG00000002509	SRRM1	59	97.571	MGP_PahariEiJ_G0028969	Srrm1	100	85.965	Mus_pahari
ENSPPRG00000002509	SRRM1	59	97.166	MGP_SPRETEiJ_G0027616	Srrm1	100	85.965	Mus_spretus
ENSPPRG00000002509	SRRM1	100	98.451	ENSNLEG00000008966	SRRM1	100	98.451	Nomascus_leucogenys
ENSPPRG00000002509	SRRM1	60	90.123	ENSMEUG00000014704	SRRM1	59	89.815	Notamacropus_eugenii
ENSPPRG00000002509	SRRM1	100	96.834	ENSOCUG00000008438	SRRM1	100	96.834	Oryctolagus_cuniculus
ENSPPRG00000002509	SRRM1	100	96.732	ENSOGAG00000010210	SRRM1	100	96.732	Otolemur_garnettii
ENSPPRG00000002509	SRRM1	92	97.406	ENSOARG00000006453	SRRM1	99	97.406	Ovis_aries
ENSPPRG00000002509	SRRM1	100	98.341	ENSPPAG00000043918	SRRM1	100	98.341	Pan_paniscus
ENSPPRG00000002509	SRRM1	100	94.426	ENSPTIG00000008778	-	100	94.426	Panthera_tigris_altaica
ENSPPRG00000002509	SRRM1	100	98.451	ENSPTRG00000000349	SRRM1	100	98.451	Pan_troglodytes
ENSPPRG00000002509	SRRM1	100	97.473	ENSPANG00000010194	SRRM1	100	97.473	Papio_anubis
ENSPPRG00000002509	SRRM1	55	78.226	ENSPANG00000035568	-	59	77.218	Papio_anubis
ENSPPRG00000002509	SRRM1	100	98.031	ENSPPYG00000001716	SRRM1	100	98.031	Pongo_abelii
ENSPPRG00000002509	SRRM1	52	100.000	ENSPCAG00000015138	SRRM1	52	100.000	Procavia_capensis
ENSPPRG00000002509	SRRM1	100	98.031	ENSPCOG00000021311	SRRM1	100	98.031	Propithecus_coquereli
ENSPPRG00000002509	SRRM1	100	98.467	ENSPVAG00000005836	SRRM1	100	98.467	Pteropus_vampyrus
ENSPPRG00000002509	SRRM1	99	92.489	ENSRBIG00000035461	SRRM1	99	92.489	Rhinopithecus_bieti
ENSPPRG00000002509	SRRM1	100	98.119	ENSRROG00000035151	SRRM1	100	98.119	Rhinopithecus_roxellana
ENSPPRG00000002509	SRRM1	100	96.714	ENSSBOG00000019884	SRRM1	99	100.000	Saimiri_boliviensis_boliviensis
ENSPPRG00000002509	SRRM1	61	95.410	ENSSARG00000013718	SRRM1	60	95.410	Sorex_araneus
ENSPPRG00000002509	SRRM1	60	71.870	ENSSPUG00000015890	SRRM1	57	82.963	Sphenodon_punctatus
ENSPPRG00000002509	SRRM1	99	98.024	ENSSSCG00000032947	SRRM1	100	98.417	Sus_scrofa
ENSPPRG00000002509	SRRM1	100	97.371	ENSTBEG00000000100	SRRM1	100	97.371	Tupaia_belangeri
ENSPPRG00000002509	SRRM1	99	97.682	ENSTTRG00000009365	SRRM1	100	97.682	Tursiops_truncatus
ENSPPRG00000002509	SRRM1	88	99.624	ENSUMAG00000013121	SRRM1	95	99.624	Ursus_maritimus
ENSPPRG00000002509	SRRM1	96	96.237	ENSVPAG00000007698	SRRM1	100	96.237	Vicugna_pacos
ENSPPRG00000002509	SRRM1	99	96.313	ENSVVUG00000026966	SRRM1	97	96.313	Vulpes_vulpes